FFCP PHASE1:Hg19::chr9:95186583..95186648,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=4958|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=8134|TSSclassifier=S|UniProt=Q99983|association_with_transcript=94bp_to_ENST00000375550_5end|coexpression_cluster_id=C216|description=CAGE_peak_1_at_OMD_5end|id=chr9:95186583..95186648,-|ontology_enrichment_celltype=CL:0000136!2.27e-12!15;CL:0000057!1.28e-08!75;CL:0000153!1.50e-07!9;CL:0000447!1.50e-07!9;CL:0000327!4.97e-07!14;CL:0000667!5.13e-07!6;CL:0000058!5.13e-07!6;CL:0000138!5.13e-07!6|ontology_enrichment_celltype_v019=CL:0000136;3.14e-12;13!CL:0000153;8.38e-10;9!CL:0000447;8.38e-10;9!CL:0000138;2.28e-08;6!CL:0002615;6.11e-07;3!CL:0000135;9.60e-07;3!CL:0000388;9.60e-07;3|ontology_enrichment_celltype_v019_2=CL:0000136,3.54e-15,15;CL:0000153,8.07e-10,9;CL:0000447,8.07e-10,9;CL:0000058,2.13e-08,6;CL:0000138,2.13e-08,6;CL:0002615,6.24e-07,3;CL:0000135,9.44e-07,3;CL:0000388,9.44e-07,3|ontology_enrichment_development_v019=UBERON:0005062;2.31e-07;4!UBERON:0007284;2.31e-07;4|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!4.01e-29!115;UBERON:0001049!4.75e-11!57;UBERON:0005068!4.75e-11!57;UBERON:0006241!4.75e-11!57;UBERON:0007135!4.75e-11!57;UBERON:0000153!3.80e-10!129;UBERON:0007811!3.80e-10!129;UBERON:0003075!2.10e-09!86;UBERON:0007284!2.10e-09!86;UBERON:0000033!2.17e-09!123;UBERON:0002616!1.14e-08!59;UBERON:0003080!1.49e-08!42;UBERON:0002346!1.83e-08!90;UBERON:0002780!5.26e-08!41;UBERON:0001890!5.26e-08!41;UBERON:0006240!5.26e-08!41;UBERON:0005743!6.74e-08!86;UBERON:0001017!1.60e-07!82;UBERON:0000475!1.69e-07!365;UBERON:0000078!3.65e-07!18;UBERON:0004121!3.83e-07!169;UBERON:0000955!4.90e-07!69;UBERON:0006238!4.90e-07!69;UBERON:0001013!5.99e-07!14|ontology_enrichment_uberon_v019=UBERON:0004457;2.48e-09;9!UBERON:0000042;2.48e-09;9!UBERON:0003688;7.58e-08;6!UBERON:0002358;7.58e-08;6!UBERON:0003684;7.58e-08;6!UBERON:0001178;7.58e-08;6!UBERON:0007846;9.60e-07;3!UBERON:0000043;9.60e-07;3!UBERON:0007845;9.60e-07;3|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.75e-15,114;UBERON:0003688,9.44e-08,6;UBERON:0002358,9.44e-08,6;UBERON:0003684,9.44e-08,6;UBERON:0001178,9.44e-08,6;UBERON:0007846,9.44e-07,3;UBERON:0000043,9.44e-07,3;UBERON:0007845,9.44e-07,3;UBERON:0001013,9.88e-07,14|phase1_expression=24.163224442984,7.49351833618441,30.1642424765378,14.0102617694383,18.3254048715188,15.7020934338066,2.53299878168311,2.52687949370732,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0.204000691244253,0,0.286235987131057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.954053754535364,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,43.7341374385325,22.0588680679791,27.6656851215173,5.5670016293577,6.8128881842369,0,0,0,0.982343066232845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.01571269048339,0.354668382198357,0,0,0,0.933633106199299,0,0,1.81628913173918,0,0,0,0,0,0,0,0,2.24569588380383,0,1.65321249881225,13.0680314301026,2.22540236350701,0,0,0.336672227908132,0.125118519871964,2.49357703935765,3.07284334616587,1.5324389789951,0.751190294532984,0.113432183160021,3.7671823494661,19.4337223824896,0.423863802319124,0.300091096084402,3.29768093563004,0,0.744467425326359,0.675105328965065,0.194874010322397,0.252433774244115,2.57739716198438,22.307155840996,0.710019185033229,0.705264687593482,0,0,0,0,0,0,0,0,0,0,0,0.643240938192885,0,18.5747171212792,5.0531563716871,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0.414656231081544,0.144119953416961,0.37872730027914,0,0,0,0,0,0,0,0.112131084345361,0.43596006883328,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.90909528002464,0.410952645100767,0,0,0,0,0,0,0,0,0,0,0,0,0,0.981531933753119,0,0,1.24782516918484,2.85486382075459,2.52323864054295,5.73992933464295,23.4737957787621,6.82222512167955,39.3197670911519,0,0.368738337083406,0.173767228936166,0,0,0,0,0,0,0,0,0.992431231275107,5.37116906508219,0.561320188866147,1.15325234330131,6.14048698880044,0,2.96836132889982,0,0,0.164254312027618,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325378394664303,2.16386124460217,0.640986253728404,0.990113999047056,0,0,0,0,0,0,0,0,0,0,0.623224249527161,0,0,0,0,0,0,0,1.54016790088044,0,0,0,0,0,0,0,0,0.42793898803392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.81098250601357,2.30506425071931,0,0,0,0,0,2.54188262097304,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0.144269212976445,1.84968792705877,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.44635988796334,0,0,0,0,0,0,1.9882952955326,0.281338832821026,0,0,0.422250816255987,6.17668763578316,0.552567831062295,0,0,0,0,0,0,0,7.39825542277002,0,0,0,1.39152147242777,0,0,0,2.17499872630438,0,0,0,0,0,0,0,0.120596438625408,0,0.552896299656123,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=4958 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8134 | |||
|TSSclassifier=S | |||
|UniProt=Q99983 | |||
|association_with_transcript=94bp_to_ENST00000375550_5end | |||
|coexpression_cluster_id=C216 | |||
|description=CAGE_peak_1_at_OMD_5end | |||
|id=chr9:95186583..95186648,- | |||
|ontology_enrichment_celltype=CL:0000136!2.27e-12!15;CL:0000057!1.28e-08!75;CL:0000153!1.50e-07!9;CL:0000447!1.50e-07!9;CL:0000327!4.97e-07!14;CL:0000667!5.13e-07!6;CL:0000058!5.13e-07!6;CL:0000138!5.13e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0000136;3.14e-12;13!CL:0000153;8.38e-10;9!CL:0000447;8.38e-10;9!CL:0000138;2.28e-08;6!CL:0002615;6.11e-07;3!CL:0000135;9.60e-07;3!CL:0000388;9.60e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,3.54e-15,15;CL:0000153,8.07e-10,9;CL:0000447,8.07e-10,9;CL:0000058,2.13e-08,6;CL:0000138,2.13e-08,6;CL:0002615,6.24e-07,3;CL:0000135,9.44e-07,3;CL:0000388,9.44e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0005062;2.31e-07;4!UBERON:0007284;2.31e-07;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.01e-29!115;UBERON:0001049!4.75e-11!57;UBERON:0005068!4.75e-11!57;UBERON:0006241!4.75e-11!57;UBERON:0007135!4.75e-11!57;UBERON:0000153!3.80e-10!129;UBERON:0007811!3.80e-10!129;UBERON:0003075!2.10e-09!86;UBERON:0007284!2.10e-09!86;UBERON:0000033!2.17e-09!123;UBERON:0002616!1.14e-08!59;UBERON:0003080!1.49e-08!42;UBERON:0002346!1.83e-08!90;UBERON:0002780!5.26e-08!41;UBERON:0001890!5.26e-08!41;UBERON:0006240!5.26e-08!41;UBERON:0005743!6.74e-08!86;UBERON:0001017!1.60e-07!82;UBERON:0000475!1.69e-07!365;UBERON:0000078!3.65e-07!18;UBERON:0004121!3.83e-07!169;UBERON:0000955!4.90e-07!69;UBERON:0006238!4.90e-07!69;UBERON:0001013!5.99e-07!14 | |||
|ontology_enrichment_uberon_v019=UBERON:0004457;2.48e-09;9!UBERON:0000042;2.48e-09;9!UBERON:0003688;7.58e-08;6!UBERON:0002358;7.58e-08;6!UBERON:0003684;7.58e-08;6!UBERON:0001178;7.58e-08;6!UBERON:0007846;9.60e-07;3!UBERON:0000043;9.60e-07;3!UBERON:0007845;9.60e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.75e-15,114;UBERON:0003688,9.44e-08,6;UBERON:0002358,9.44e-08,6;UBERON:0003684,9.44e-08,6;UBERON:0001178,9.44e-08,6;UBERON:0007846,9.44e-07,3;UBERON:0000043,9.44e-07,3;UBERON:0007845,9.44e-07,3;UBERON:0001013,9.88e-07,14 | |||
|phase1_expression=24.163224442984,7.49351833618441,30.1642424765378,14.0102617694383,18.3254048715188,15.7020934338066,2.53299878168311,2.52687949370732,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0.204000691244253,0,0.286235987131057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.954053754535364,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,43.7341374385325,22.0588680679791,27.6656851215173,5.5670016293577,6.8128881842369,0,0,0,0.982343066232845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.01571269048339,0.354668382198357,0,0,0,0.933633106199299,0,0,1.81628913173918,0,0,0,0,0,0,0,0,2.24569588380383,0,1.65321249881225,13.0680314301026,2.22540236350701,0,0,0.336672227908132,0.125118519871964,2.49357703935765,3.07284334616587,1.5324389789951,0.751190294532984,0.113432183160021,3.7671823494661,19.4337223824896,0.423863802319124,0.300091096084402,3.29768093563004,0,0.744467425326359,0.675105328965065,0.194874010322397,0.252433774244115,2.57739716198438,22.307155840996,0.710019185033229,0.705264687593482,0,0,0,0,0,0,0,0,0,0,0,0.643240938192885,0,18.5747171212792,5.0531563716871,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0.414656231081544,0.144119953416961,0.37872730027914,0,0,0,0,0,0,0,0.112131084345361,0.43596006883328,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.90909528002464,0.410952645100767,0,0,0,0,0,0,0,0,0,0,0,0,0,0.981531933753119,0,0,1.24782516918484,2.85486382075459,2.52323864054295,5.73992933464295,23.4737957787621,6.82222512167955,39.3197670911519,0,0.368738337083406,0.173767228936166,0,0,0,0,0,0,0,0,0.992431231275107,5.37116906508219,0.561320188866147,1.15325234330131,6.14048698880044,0,2.96836132889982,0,0,0.164254312027618,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325378394664303,2.16386124460217,0.640986253728404,0.990113999047056,0,0,0,0,0,0,0,0,0,0,0.623224249527161,0,0,0,0,0,0,0,1.54016790088044,0,0,0,0,0,0,0,0,0.42793898803392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.81098250601357,2.30506425071931,0,0,0,0,0,2.54188262097304,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0.144269212976445,1.84968792705877,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.44635988796334,0,0,0,0,0,0,1.9882952955326,0.281338832821026,0,0,0.422250816255987,6.17668763578316,0.552567831062295,0,0,0,0,0,0,0,7.39825542277002,0,0,0,1.39152147242777,0,0,0,2.17499872630438,0,0,0,0,0,0,0,0.120596438625408,0,0.552896299656123,0,5.48463492884931,0,0,6.46382171431895,0,0,0,0,4.14701507651495,0.0915975934018623,1.06606955203727,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,3.18447232212021,1.83309043480088,0,0,0,0.202203398942031,3.21031058919516,0.234264445725339,0,0,0,3.15667522279512,2.41981432097328,0.30607276163049,26.8542963421074,0,0,0,0,0,1.19472429772959,0,0.138674673013139,0,0,0,16.0748534782668,0,0,0,0,2.90967049465258,0.0882561266915003,48.3598785270339,0,0,0.696418755514666,0,0,0.640358984218058,0,0,0,0,0,0.124252535565433,0,0.135904206073614,0,0,0,0,0.136905378891993,0,0,0,8.65775443943988,2.29160424011684,1.43574604915363,0.199679000498991,0,1.33902874465124,1.74677028465488,0,0,0,0,0,0,0,0,0.681017030557878,0,0,0,0,0,0,0,1.65491985328316,0.577000469484979,0,0,0,2.85878130549347,0.662091970365432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.62081957919707,5.50215067848831,3.72815149812476,0,0,0,0,0.544017803369474,1.2534494701135,1.22538230705385,0,0,0,0,0.500763722825999,1.72022758707021,0.776503360757966,0.0620964029413835,0,0,0,0,0,0,0,0.149254802886874,1.16856654923612,0.554805861502613,0,0.251567901752575,1.77962244319307,0.228840068396924,0,1.24349760466224,0,0,0,0,0.414706207840855,0,0,0,0,0,0,0,0,0,0,16.4829938487741,5.38799182025471,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,19.3971769029876,0,0.192687675289379,0,0.159633859057151,0.205116364240755,0,0,0.484426936895553,0,0,0,0,0,0,0,313.690882277365,3.00841313397029,0,0.781514011233092,0,0.163771917510097,0,0.0675375846183947,0,0.413373593002368,0.19024743058172,1.09394961803644,0,4.96211178389294,0,0.255524855279191,2.14280734351315,1.3451348888753,3.03482802118316,0.455324382702595,6.12046354122208,0,0,0.203909198930495,0.0657727735628491,0,0,6.27944742804112,0,0,0,0,0,11.865106333325,0,0,0,0.801711364730253,0.62164849248911,1.53646629384555,0.691259661814092,1.72090943528111,0,0,0,0,0,0,0,0,0,0,1.12929087541872,1.1598144313382,11.1713528403602,0,0,0,0,0,0,1.23478652972711,0,0,3.67722482630858,0,2.94462700672418,0.297046400327086,8.453114551668,0,0.0939839179798536,0,0,0,0,0,1.46067277649303,0,0.430018749454354,0,0.0679914901909147,0,0.5290268405154,11.5318455631693,11.5543907157855,18.6029421713229,0,0,0,0,0,0,0,10.1543455612441,0.267964130156178,0.829169439458779,0.103432995861895,21.1101642081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| |||
|short_description=p1@OMD | |||
}} |
Revision as of 09:48, 14 September 2013
Short description: | p1@OMD |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_OMD_5end |
Coexpression cluster: | C216_osteosarcoma_Smooth_Mesenchymal_large_neuroectodermal_acute_CD34 |
Association with transcript: | 94bp_to_ENST00000375550_5end |
EntrezGene: | OMD |
HGNC: | 8134 |
UniProt: | Q99983 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 3.54e-15 | 15 |
GAG secreting cell | 8.07e-10 | 9 |
carbohydrate secreting cell | 8.07e-10 | 9 |
chondroblast | 2.13e-08 | 6 |
chondrocyte | 2.13e-08 | 6 |
adipocyte of omentum tissue | 6.24e-07 | 3 |
fibrocyte | 9.44e-07 | 3 |
tendon cell | 9.44e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
adult organism | 2.75e-15 | 114 |
omentum | 9.44e-08 | 6 |
peritoneum | 9.44e-08 | 6 |
abdominal cavity | 9.44e-08 | 6 |
visceral peritoneum | 9.44e-08 | 6 |
dense regular connective tissue | 9.44e-07 | 3 |
tendon | 9.44e-07 | 3 |
regular connective tissue | 9.44e-07 | 3 |
adipose tissue | 9.88e-07 | 14 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.