FFCP PHASE1:Mm9::chr6:15314486..15314495,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=582|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr6:15314486..15314495,+|id=chr6:15314486..15314495,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002048!3.32e-07!14;UBERON:0000117!3.32e-07!14;UBERON:0000171!3.32e-07!14;UBERON:0000170!3.32e-07!14;UBERON:0005597!3.32e-07!14;UBERON:0000118!3.32e-07!14;UBERON:0000025!4.21e-07!114|ontology_enrichment_uberon_v019_2=UBERON:0002048,1.34e-09,14;UBERON:0000117,1.34e-09,14;UBERON:0000171,1.34e-09,14;UBERON:0000170,1.34e-09,14;UBERON:0005597,1.34e-09,14;UBERON:0000118,1.34e-09,14;UBERON:0000310,1.44e-08,6;UBERON:0001443,1.44e-08,6;UBERON:0005153,1.49e-07,17;UBERON:0005178,1.49e-07,17;UBERON:0005181,1.49e-07,17;UBERON:0002224,1.49e-07,17;UBERON:0000915,1.49e-07,17;UBERON:0008947,1.49e-07,17;UBERON:0003258,1.49e-07,17;UBERON:0000945,1.56e-07,16;UBERON:0010039,1.56e-07,16;UBERON:0001041,4.68e-07,80|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0.550640256485045,0,0,0,0,0,0,0,0,0,0.257259436035947,0.573066879877513,0,0.404632921719196,0.528990979272033,0,0,0,0,0,0,0,0,0.311068836925433,0,0,0.285650984403804,0,0.367472397644862,0.191690942036473,0.919218786610021,0,0.255374676170375,0.153606533256243,0,0.182975287204819,0.52091337055676,0,1.68828783009504,0.45839474333043,0.294628585473668,0.284743361598206,0,0.075726193333184,0,0,0.860423876981386,0,0,0,1.34408066129201,0,0,0.259786004602869,0,0,0,0,0,0,0,0,0.22836775943812,0,0.148442139064825,0.867426633830679,0.304465478312141,0.461230994512117,0.150722640552623,0.705532242814229,0,0,0.433798070759735,0,0.323533699894818,0.441683036920787,0,0,0.292780797011547,0.209446706813455,0,0,0,0,0.898743836428936,0.457500602818626,1.63350657746724,0.521472960576829,0.511430914660661,0.83115217823824,0.973447578406546,0.407357455401265,0,0,0.210441855886474,1.56144531555244,0,0.720248519221397,1.35634336052144,2.10913147369116,0.384341160854549,0.749613796477831,0,0,1.13463648100692,1.40760899331159,0.876782929710299,2.50242524303038,1.0447564995665,0.61734640922383,0.995171334092466,0,0,0,0.828503090142008,0.938104239924385,0.720248245844059,0.946978942340841,0.590292695242212,0.925602677324269,0,0.268273401399619,0.934122738937356,0.658239399653922,0.656669856316381,0.162137619091711,1.16959989940266,0.219550115291051,0.268412837520744,0,0.102904612379284,0,0.528901133327089,3.41261200856374,2.55460339046482,0.515469845288373,0.80673409849337,0.667134131534611,0.570676878337677,0,0.494096864172033,1.50801125280162,0.198956472041151,0.38992817423824,0,0.432276099749388,0.398282546508734,0,0.456994050438915,0,0.610953983535943,0.193952487167626,0.280543279561274,0.0632365371242573,0,0,0.123397163921801,0.592905254174298,0.333690211432188,0.196558995113203,0,0,0.241177159752417,0.50925170356284,0,1.13494658742525,0.823684239564244,5.75072826109418,1.86070473834252,0.624075346229121,0.757736633841335,1.07638448113147,1.4473305640901,0,1.70542270593436,2.28150967018836,4.41337223015489,8.91822943496308,3.51763140627813,1.6663054862021,1.95133647857799,0.472905432318573,0.664394068946325,0.956728611944923,1.14704320301017,0.863424909329478,1.44649058581512,0,0,0,0,0.321101179975584,0.117211686592203,0,0,0,0.390438744296638,0.430846795465598,0,0,0,0,0.292255857911312,0,0,1.27746076687442,0,0.162886959353576,0.164970122972535,1.32745138339963,0,0.604647113929502,0.377210159511796,0,0,0.775284879504663,1.45413491791002,0.712994756769443,0,1.05418608574999,1.03135543248187,0.680879211507576,1.62054984628179,0.388076051348264,0.857348140126369,0.709360934569094,1.42695054081656,1.64549020602121,1.522324745573,0,0,0.661585194164886,0.16488625294148,0.322928853391811,0.180938774784468,0.358117032009409,0.164140899745061,0.874442509889552,0,0,1.03193433981611,0.370389054739423,0,0,0,0,0.139951452323658,0,0.954670618015114,1.42351197111511,1.82987520414164,2.05210147561422,2.29997125615916,1.74690050996942,2.42755823492677,1.81837602595739,1.04702376793612,0.388844919875379,0,0,0,0.165458490457098,0,0,0.168956125490778,0,0,0,0,0,0,0.405450430580328,0.102710957164827,0,0.179026695667481,0,0,0,0.100966449948148,0,0,0,0,0,0.226730383615211,0,0,0,0.579568782096571,0.187682475451182,0,0,0,0,0,0,1.54667864109319,0.685082519770642,0,0,0,0,0,0.415149390336707,0.399024873401031,1.19513524027894,1.21553358534147,0.209613162627982,0,0.44449345560323,1.03017528619447,0.64183841918363,0,0,0,0.468207537349412,0.768301828858431,1.09127391015665,0,0.463537303779422,0.77163688185482,0,0.883193520806384,0,0.70990322463735,0.715308569841963,1.16277133305863,0.470546902076653,0.676916863133412,0.548783918618318,1.31534855718921,0.543216455383447,1.12228454331548,0.474540072496697,0.886540341380071,0.409231043169689,0.619747364743864,0.192906610981141,0.249810577937946,0.467863216890817,0.214871054048298,0.382576664137687,0.441182838239031,0.231867835620421|short_description=p@chr6:15314486..15314495,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=582 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr6:15314486..15314495,+ | |||
|id=chr6:15314486..15314495,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002048!3.32e-07!14;UBERON:0000117!3.32e-07!14;UBERON:0000171!3.32e-07!14;UBERON:0000170!3.32e-07!14;UBERON:0005597!3.32e-07!14;UBERON:0000118!3.32e-07!14;UBERON:0000025!4.21e-07!114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002048,1.34e-09,14;UBERON:0000117,1.34e-09,14;UBERON:0000171,1.34e-09,14;UBERON:0000170,1.34e-09,14;UBERON:0005597,1.34e-09,14;UBERON:0000118,1.34e-09,14;UBERON:0000310,1.44e-08,6;UBERON:0001443,1.44e-08,6;UBERON:0005153,1.49e-07,17;UBERON:0005178,1.49e-07,17;UBERON:0005181,1.49e-07,17;UBERON:0002224,1.49e-07,17;UBERON:0000915,1.49e-07,17;UBERON:0008947,1.49e-07,17;UBERON:0003258,1.49e-07,17;UBERON:0000945,1.56e-07,16;UBERON:0010039,1.56e-07,16;UBERON:0001041,4.68e-07,80 | |||
|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0.550640256485045,0,0,0,0,0,0,0,0,0,0.257259436035947,0.573066879877513,0,0.404632921719196,0.528990979272033,0,0,0,0,0,0,0,0,0.311068836925433,0,0,0.285650984403804,0,0.367472397644862,0.191690942036473,0.919218786610021,0,0.255374676170375,0.153606533256243,0,0.182975287204819,0.52091337055676,0,1.68828783009504,0.45839474333043,0.294628585473668,0.284743361598206,0,0.075726193333184,0,0,0.860423876981386,0,0,0,1.34408066129201,0,0,0.259786004602869,0,0,0,0,0,0,0,0,0.22836775943812,0,0.148442139064825,0.867426633830679,0.304465478312141,0.461230994512117,0.150722640552623,0.705532242814229,0,0,0.433798070759735,0,0.323533699894818,0.441683036920787,0,0,0.292780797011547,0.209446706813455,0,0,0,0,0.898743836428936,0.457500602818626,1.63350657746724,0.521472960576829,0.511430914660661,0.83115217823824,0.973447578406546,0.407357455401265,0,0,0.210441855886474,1.56144531555244,0,0.720248519221397,1.35634336052144,2.10913147369116,0.384341160854549,0.749613796477831,0,0,1.13463648100692,1.40760899331159,0.876782929710299,2.50242524303038,1.0447564995665,0.61734640922383,0.995171334092466,0,0,0,0.828503090142008,0.938104239924385,0.720248245844059,0.946978942340841,0.590292695242212,0.925602677324269,0,0.268273401399619,0.934122738937356,0.658239399653922,0.656669856316381,0.162137619091711,1.16959989940266,0.219550115291051,0.268412837520744,0,0.102904612379284,0,0.528901133327089,3.41261200856374,2.55460339046482,0.515469845288373,0.80673409849337,0.667134131534611,0.570676878337677,0,0.494096864172033,1.50801125280162,0.198956472041151,0.38992817423824,0,0.432276099749388,0.398282546508734,0,0.456994050438915,0,0.610953983535943,0.193952487167626,0.280543279561274,0.0632365371242573,0,0,0.123397163921801,0.592905254174298,0.333690211432188,0.196558995113203,0,0,0.241177159752417,0.50925170356284,0,1.13494658742525,0.823684239564244,5.75072826109418,1.86070473834252,0.624075346229121,0.757736633841335,1.07638448113147,1.4473305640901,0,1.70542270593436,2.28150967018836,4.41337223015489,8.91822943496308,3.51763140627813,1.6663054862021,1.95133647857799,0.472905432318573,0.664394068946325,0.956728611944923,1.14704320301017,0.863424909329478,1.44649058581512,0,0,0,0,0.321101179975584,0.117211686592203,0,0,0,0.390438744296638,0.430846795465598,0,0,0,0,0.292255857911312,0,0,1.27746076687442,0,0.162886959353576,0.164970122972535,1.32745138339963,0,0.604647113929502,0.377210159511796,0,0,0.775284879504663,1.45413491791002,0.712994756769443,0,1.05418608574999,1.03135543248187,0.680879211507576,1.62054984628179,0.388076051348264,0.857348140126369,0.709360934569094,1.42695054081656,1.64549020602121,1.522324745573,0,0,0.661585194164886,0.16488625294148,0.322928853391811,0.180938774784468,0.358117032009409,0.164140899745061,0.874442509889552,0,0,1.03193433981611,0.370389054739423,0,0,0,0,0.139951452323658,0,0.954670618015114,1.42351197111511,1.82987520414164,2.05210147561422,2.29997125615916,1.74690050996942,2.42755823492677,1.81837602595739,1.04702376793612,0.388844919875379,0,0,0,0.165458490457098,0,0,0.168956125490778,0,0,0,0,0,0,0.405450430580328,0.102710957164827,0,0.179026695667481,0,0,0,0.100966449948148,0,0,0,0,0,0.226730383615211,0,0,0,0.579568782096571,0.187682475451182,0,0,0,0,0,0,1.54667864109319,0.685082519770642,0,0,0,0,0,0.415149390336707,0.399024873401031,1.19513524027894,1.21553358534147,0.209613162627982,0,0.44449345560323,1.03017528619447,0.64183841918363,0,0,0,0.468207537349412,0.768301828858431,1.09127391015665,0,0.463537303779422,0.77163688185482,0,0.883193520806384,0,0.70990322463735,0.715308569841963,1.16277133305863,0.470546902076653,0.676916863133412,0.548783918618318,1.31534855718921,0.543216455383447,1.12228454331548,0.474540072496697,0.886540341380071,0.409231043169689,0.619747364743864,0.192906610981141,0.249810577937946,0.467863216890817,0.214871054048298,0.382576664137687,0.441182838239031,0.231867835620421 | |||
|short_description=p@chr6:15314486..15314495,+ | |||
}} |
Revision as of 09:26, 14 September 2013
Short description: | p@chr6:15314486..15314495, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr6:15314486..15314495, + |
Coexpression cluster: | MCL_coexpression_mm9:582 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lung | 1.34e-09 | 14 |
respiratory tube | 1.34e-09 | 14 |
respiration organ | 1.34e-09 | 14 |
pair of lungs | 1.34e-09 | 14 |
lung primordium | 1.34e-09 | 14 |
lung bud | 1.34e-09 | 14 |
breast | 1.44e-08 | 6 |
chest | 1.44e-08 | 6 |
epithelial bud | 1.49e-07 | 17 |
thoracic cavity element | 1.49e-07 | 17 |
thoracic segment organ | 1.49e-07 | 17 |
thoracic cavity | 1.49e-07 | 17 |
thoracic segment of trunk | 1.49e-07 | 17 |
respiratory primordium | 1.49e-07 | 17 |
endoderm of foregut | 1.49e-07 | 17 |
stomach | 1.56e-07 | 16 |
food storage organ | 1.56e-07 | 16 |
foregut | 4.68e-07 | 80 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.