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FFCP PHASE1:Mm9::chr6:136499682..136499700,+: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=405|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr6:136499682..136499700,+|id=chr6:136499682..136499700,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!4.90e-13!73;UBERON:0005743!4.90e-13!73;UBERON:0000955!9.16e-13!50;UBERON:0006238!9.16e-13!50;UBERON:0002616!2.71e-12!49;UBERON:0000073!4.57e-12!75;UBERON:0001016!4.57e-12!75;UBERON:0000033!5.80e-12!63;UBERON:0001049!6.22e-12!52;UBERON:0005068!6.22e-12!52;UBERON:0006241!6.22e-12!52;UBERON:0007135!6.22e-12!52;UBERON:0000153!7.69e-11!94;UBERON:0004121!1.24e-10!102;UBERON:0000924!1.24e-10!102;UBERON:0006601!1.24e-10!102;UBERON:0007811!2.29e-10!86;UBERON:0003080!2.94e-09!40;UBERON:0002020!2.94e-09!34;UBERON:0002346!3.47e-09!71;UBERON:0003075!3.47e-09!71;UBERON:0007284!3.47e-09!71;UBERON:0002791!6.33e-09!29;UBERON:0003528!6.33e-09!29;UBERON:0001893!6.33e-09!29;UBERON:0002780!8.23e-09!39;UBERON:0001890!8.23e-09!39;UBERON:0006240!8.23e-09!39;UBERON:0000956!9.94e-09!21;UBERON:0001869!9.94e-09!21;UBERON:0000203!9.94e-09!21;UBERON:0002619!4.55e-08!17;UBERON:0003056!6.35e-08!49;UBERON:0002021!9.26e-08!10;UBERON:0000411!9.26e-08!10;UBERON:0001950!9.26e-08!10|ontology_enrichment_uberon_v019_2=UBERON:0010314,7.71e-15,92;UBERON:0000073,2.09e-12,54;UBERON:0001017,2.20e-12,73;UBERON:0001049,1.53e-11,52;UBERON:0005068,1.53e-11,52;UBERON:0006241,1.53e-11,52;UBERON:0007135,1.53e-11,52;UBERON:0001016,2.35e-11,75;UBERON:0000955,2.59e-11,47;UBERON:0006238,2.59e-11,47;UBERON:0002616,7.79e-11,46;UBERON:0004121,6.01e-10,95;UBERON:0000924,6.01e-10,95;UBERON:0006601,6.01e-10,95;UBERON:0002346,2.16e-09,64;UBERON:0003075,2.16e-09,64;UBERON:0007284,2.16e-09,64;UBERON:0002020,5.73e-09,34;UBERON:0000956,7.52e-09,21;UBERON:0001869,7.52e-09,21;UBERON:0000203,7.52e-09,21;UBERON:0003080,7.60e-09,40;UBERON:0003528,1.04e-08,29;UBERON:0002791,1.04e-08,29;UBERON:0001893,1.04e-08,29;UBERON:0010371,1.41e-08,73;UBERON:0002780,2.20e-08,39;UBERON:0001890,2.20e-08,39;UBERON:0006240,2.20e-08,39;UBERON:0002021,3.43e-08,10;UBERON:0000411,3.43e-08,10;UBERON:0001950,3.43e-08,10;UBERON:0002619,4.01e-08,17;UBERON:0003056,1.12e-07,49;UBERON:0004111,1.85e-07,122;UBERON:0000025,2.54e-07,114|phase1_expression=1.92178616525753,0,0,0,0,0,0.233612640595526,1.03298658753261,0.140788722151667,0,0,0.0797721589953364,0.171200729931206,0.699363219351979,0.999329285446988,0.809901069559304,0.699561878128147,1.10411757875383,1.09691546884591,0.84877930359606,3.57181818634493,3.47518329203099,3.91799683708403,0.47997726838022,0.45881856213434,0,0,0,0.380046838912748,0.504060259519861,0,0,0,0,0,0,0,7.11503772252743,3.1253413780952,8.89990364755457,9.41170380849623,8.19654581950135,8.25367600152961,4.28049181116963,3.95370031756107,2.9367480345869,1.56478268869608,2.8343270329458,4.83309602015838,3.69416808241138,5.87942970826523,5.75010257459886,0.335565212115473,2.17608642603403,0,2.57259436035947,4.01146815914259,2.06268836910977,1.21389876515759,0.528990979272033,1.26766280701236,0.677689064138264,2.66788438833342,0.899899717281399,2.96659908770092,0,2.69640099466564,3.45796474789399,1.97010263386108,1.89008313664367,2.94454945891935,2.57085885963423,1.98781686856452,2.32732518508413,1.72521847832825,0.919218786610021,5.50579404996943,2.93680877595932,3.37934373163736,1.71452174049252,1.82975287204819,0.52091337055676,0.837548997004143,2.8138130501584,3.20876320331301,3.83017161115768,2.98980529678116,0.559198337475902,0.075726193333184,0.68014404096107,1.44932244350839,0,0,0,0,0,1.82577746171277,1.02258193546835,1.03914401841148,0.70667914902068,2.39433813620357,8.98285341900225,10.1922095882658,7.11066703153331,0,0,0,0.68510327831436,3.88406825470758,0.742210695324124,1.21439728736295,1.52232739156071,1.38369298353635,1.65794904607885,2.82212897125692,1.13099932196708,0.494389935468748,0.578397427679647,1.76922110389975,4.04417124868523,1.54589062922275,2.90925151881133,0,8.49064311333487,16.9651832518899,1.02182822083437,0.838705871541442,0,1.01656181658452,5.54225365797844,14.1825186873774,4.77486538028885,10.9509321721134,13.2972037811772,3.94797284663164,10.3834408363365,1.52759045775474,1.49288364732112,0,2.10441855886474,0.390361328888111,0,1.26043490863744,0.452114453507145,1.90502197623718,1.40925092313335,2.34254311399322,6.20888089773638,0.431135985865684,0.945530400839096,1.93546236580344,1.09597866213787,2.22437799380478,3.48252166522167,2.67516777330327,0.796137067273973,0.702213187313235,0.257347907114715,0.568326998791185,1.03562886267751,0.234526059981096,1.62055855314913,2.60419209143731,3.34499193970586,3.23960937063494,4.18561100550734,3.48755421819505,6.30532848782715,4.77223564749093,17.5659186564632,20.9157528628308,16.3743985916372,17.7835593385751,10.0654814070279,4.41608891984667,2.16099685996497,0.660837565967596,0.528901133327089,0,1.16118335930219,0.38660238396628,1.4117846723634,0.889512175379481,0,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|EntrezGene=NA
|HGNC=
|MCL_coexpression_id=405
|UniProt=NA
|association_with_transcript=NA
|description=CAGE_peak_at_chr6:136499682..136499700,+
|id=chr6:136499682..136499700,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!4.90e-13!73;UBERON:0005743!4.90e-13!73;UBERON:0000955!9.16e-13!50;UBERON:0006238!9.16e-13!50;UBERON:0002616!2.71e-12!49;UBERON:0000073!4.57e-12!75;UBERON:0001016!4.57e-12!75;UBERON:0000033!5.80e-12!63;UBERON:0001049!6.22e-12!52;UBERON:0005068!6.22e-12!52;UBERON:0006241!6.22e-12!52;UBERON:0007135!6.22e-12!52;UBERON:0000153!7.69e-11!94;UBERON:0004121!1.24e-10!102;UBERON:0000924!1.24e-10!102;UBERON:0006601!1.24e-10!102;UBERON:0007811!2.29e-10!86;UBERON:0003080!2.94e-09!40;UBERON:0002020!2.94e-09!34;UBERON:0002346!3.47e-09!71;UBERON:0003075!3.47e-09!71;UBERON:0007284!3.47e-09!71;UBERON:0002791!6.33e-09!29;UBERON:0003528!6.33e-09!29;UBERON:0001893!6.33e-09!29;UBERON:0002780!8.23e-09!39;UBERON:0001890!8.23e-09!39;UBERON:0006240!8.23e-09!39;UBERON:0000956!9.94e-09!21;UBERON:0001869!9.94e-09!21;UBERON:0000203!9.94e-09!21;UBERON:0002619!4.55e-08!17;UBERON:0003056!6.35e-08!49;UBERON:0002021!9.26e-08!10;UBERON:0000411!9.26e-08!10;UBERON:0001950!9.26e-08!10
|ontology_enrichment_uberon_v019_2=UBERON:0010314,7.71e-15,92;UBERON:0000073,2.09e-12,54;UBERON:0001017,2.20e-12,73;UBERON:0001049,1.53e-11,52;UBERON:0005068,1.53e-11,52;UBERON:0006241,1.53e-11,52;UBERON:0007135,1.53e-11,52;UBERON:0001016,2.35e-11,75;UBERON:0000955,2.59e-11,47;UBERON:0006238,2.59e-11,47;UBERON:0002616,7.79e-11,46;UBERON:0004121,6.01e-10,95;UBERON:0000924,6.01e-10,95;UBERON:0006601,6.01e-10,95;UBERON:0002346,2.16e-09,64;UBERON:0003075,2.16e-09,64;UBERON:0007284,2.16e-09,64;UBERON:0002020,5.73e-09,34;UBERON:0000956,7.52e-09,21;UBERON:0001869,7.52e-09,21;UBERON:0000203,7.52e-09,21;UBERON:0003080,7.60e-09,40;UBERON:0003528,1.04e-08,29;UBERON:0002791,1.04e-08,29;UBERON:0001893,1.04e-08,29;UBERON:0010371,1.41e-08,73;UBERON:0002780,2.20e-08,39;UBERON:0001890,2.20e-08,39;UBERON:0006240,2.20e-08,39;UBERON:0002021,3.43e-08,10;UBERON:0000411,3.43e-08,10;UBERON:0001950,3.43e-08,10;UBERON:0002619,4.01e-08,17;UBERON:0003056,1.12e-07,49;UBERON:0004111,1.85e-07,122;UBERON:0000025,2.54e-07,114
|phase1_expression=1.92178616525753,0,0,0,0,0,0.233612640595526,1.03298658753261,0.140788722151667,0,0,0.0797721589953364,0.171200729931206,0.699363219351979,0.999329285446988,0.809901069559304,0.699561878128147,1.10411757875383,1.09691546884591,0.84877930359606,3.57181818634493,3.47518329203099,3.91799683708403,0.47997726838022,0.45881856213434,0,0,0,0.380046838912748,0.504060259519861,0,0,0,0,0,0,0,7.11503772252743,3.1253413780952,8.89990364755457,9.41170380849623,8.19654581950135,8.25367600152961,4.28049181116963,3.95370031756107,2.9367480345869,1.56478268869608,2.8343270329458,4.83309602015838,3.69416808241138,5.87942970826523,5.75010257459886,0.335565212115473,2.17608642603403,0,2.57259436035947,4.01146815914259,2.06268836910977,1.21389876515759,0.528990979272033,1.26766280701236,0.677689064138264,2.66788438833342,0.899899717281399,2.96659908770092,0,2.69640099466564,3.45796474789399,1.97010263386108,1.89008313664367,2.94454945891935,2.57085885963423,1.98781686856452,2.32732518508413,1.72521847832825,0.919218786610021,5.50579404996943,2.93680877595932,3.37934373163736,1.71452174049252,1.82975287204819,0.52091337055676,0.837548997004143,2.8138130501584,3.20876320331301,3.83017161115768,2.98980529678116,0.559198337475902,0.075726193333184,0.68014404096107,1.44932244350839,0,0,0,0,0,1.82577746171277,1.02258193546835,1.03914401841148,0.70667914902068,2.39433813620357,8.98285341900225,10.1922095882658,7.11066703153331,0,0,0,0.68510327831436,3.88406825470758,0.742210695324124,1.21439728736295,1.52232739156071,1.38369298353635,1.65794904607885,2.82212897125692,1.13099932196708,0.494389935468748,0.578397427679647,1.76922110389975,4.04417124868523,1.54589062922275,2.90925151881133,0,8.49064311333487,16.9651832518899,1.02182822083437,0.838705871541442,0,1.01656181658452,5.54225365797844,14.1825186873774,4.77486538028885,10.9509321721134,13.2972037811772,3.94797284663164,10.3834408363365,1.52759045775474,1.49288364732112,0,2.10441855886474,0.390361328888111,0,1.26043490863744,0.452114453507145,1.90502197623718,1.40925092313335,2.34254311399322,6.20888089773638,0.431135985865684,0.945530400839096,1.93546236580344,1.09597866213787,2.22437799380478,3.48252166522167,2.67516777330327,0.796137067273973,0.702213187313235,0.257347907114715,0.568326998791185,1.03562886267751,0.234526059981096,1.62055855314913,2.60419209143731,3.34499193970586,3.23960937063494,4.18561100550734,3.48755421819505,6.30532848782715,4.77223564749093,17.5659186564632,20.9157528628308,16.3743985916372,17.7835593385751,10.0654814070279,4.41608891984667,2.16099685996497,0.660837565967596,0.528901133327089,0,1.16118335930219,0.38660238396628,1.4117846723634,0.889512175379481,0,0,0.494096864172033,0.502670417600539,0.795825888164603,1.36474860983384,0,0.864552199498777,0.398282546508734,0.379335801906163,0.342745537829186,1.1270773567308,0.203651327845314,0.775809948670503,0.98190147846446,1.13825766823663,1.18088118383682,1.72698600625512,0.616985819609003,0,0.166845105716094,0.196558995113203,0,0,0.241177159752417,0.50925170356284,0.287696137450811,0.648540907100142,0,0,0,0.312037673114561,0.252578877947112,0.538192240565737,0,1.84753190166605,0.189491411770485,0.488894929326078,1.18821560042632,0.938760993154008,1.67506257441816,1.6663054862021,0.585400943573396,2.99506773801763,3.10050565508285,1.2756381492599,2.13022309130459,2.07221978239075,2.4590339958857,1.50791283939272,2.17562273527484,0.491764273019036,0.827810238914197,3.37156238974363,3.28192722458169,0,2.52470927204373,0.631016438832513,1.95219372148319,0.215423397732799,1.67278158566786,1.78238939265915,0.849229592366497,1.21443210502468,2.04579100537918,2.76701444562566,4.81981974632711,2.12910127812403,0.35613120733451,1.46598263418218,2.96946221350564,0,0.485561272309963,0,0.377210159511796,0.295301892880773,0.307435147943927,0.258428293168221,0,2.13898427030833,0.632073515871632,0,0,9.87274856685985,0.540183282093931,0.388076051348264,0.643011105094777,1.77340233642274,2.49716344642899,1.48094118541909,2.43571959291679,0.938686832254841,0.847328283455281,0.441056796109924,4.45192882941996,1.93757312035087,1.62844897306021,1.07435109602823,0.820704498725306,0.291480836629851,2.96680483216816,0.683483523191411,0.206386867963223,1.11116716421827,1.50694765603753,0.410082683163076,1.60144721244566,3.22959016988325,1.25956307091292,3.59319931891502,0.954670618015114,0.632671987162271,0.203319467126849,0.648032044930808,0.418176592028937,0.218362563746178,0.539457385539283,1.57041565878138,0,0.777689839750757,2.4853572523477,0,1.49516546043979,1.65458490457098,0.777804753376191,0.387479470433193,1.35164900392623,2.22978753426933,2.21347454234715,2.30690557736564,2.17425708743405,2.01621004380506,3.16011120628178,0.608175645870493,1.95150818613172,2.20865399062252,1.61124026100733,1.58945083825012,1.9231271923195,2.65841148914239,1.31256384932592,1.600342939755,1.71404514732629,2.0466154955348,1.6356013078856,1.63627663054197,3.17422537061296,0.665957860122194,0,0,1.9318959403219,0.93841237725591,2.01466786693992,1.2862102744744,0,10.7302850097243,12.4287813856938,11.4579102687879,9.6237782112465,14.3867329151835,15.107877947794,9.45031500324528,17.1122057225204,12.6879874515577,18.1216109113137,0.31136204275253,1.19707462020309,0.341467211508268,1.21553358534147,1.25767897576789,1.2869045591501,1.55572709461131,2.88449080134452,1.60459604795908,2.77966932940177,3.29523089857312,1.50901073108861,2.43467919421694,2.17685518176556,2.98664438569189,3.81034953026459,1.50649623728312,2.50781986602817,2.47251540481984,1.91358596174717,2.05721551431249,2.66213709239006,2.62279808942053,2.18019624948493,2.07040636913727,2.28459441307527,2.56099162021882,1.8414879800649,2.03706170768793,2.80571135828869,1.89816028998679,1.97008964751127,0.818462086339379,2.16911577660352,0.964533054905707,2.49810577937946,1.87145286756327,1.93383948643468,2.10417165275728,4.19123696327079,3.01428186306548
|short_description=p@chr6:136499682..136499700,+
}}

Revision as of 09:11, 14 September 2013

Short description:p@chr6:136499682..136499700, +
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_at_chr6:136499682..136499700, +
Coexpression cluster:MCL_coexpression_mm9:405
Association with transcript: NA
EntrezGene:NA
Link to Zenbu:ZENBU


View on UCSC genome browser

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CAGE Expression

Sample

p@chr6:136499682..136499700+

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.92
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.23
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E91.03
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.14
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.08
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.17
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.70
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A11.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.81
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.70
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A21.10
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A41.10
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.85
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A33.57
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H23.48
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I93.92
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.48
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.46
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.38
Ileum epithelium, pool2.CNhs13232.10253-104C10.50
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G87.12
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H13.13
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H38.90
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G99.41
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H28.20
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H48.25
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D84.28
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D93.95
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B32.94
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B71.56
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C22.83
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B84.83
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C33.69
Mouse Astrocytes, donor2.CNhs12078.11552-120C45.88
Mouse Astrocytes, donor3.CNhs12107.11633-122C45.75
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.34
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I92.18
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C12.57
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E14.01
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C52.06
Mouse Granule cells, donor1.CNhs12131.11713-123C31.21
Mouse Granule cells, donor2.CNhs12357.11731-123E30.53
Mouse Granule cells, donor3.CNhs12108.11636-122C71.27
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.68
Mouse Meningeal cells, donor3.CNhs12109.11639-122D12.67
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.90
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E72.97
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C82.70
Mouse Microglia, donor2.CNhs12634.11736-123E83.46
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.97
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.89
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D92.94
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F12.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.99
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D22.33
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21.73
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D35.51
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F32.94
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D73.38
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.71
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.83
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.52
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.84
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E52.81
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I63.21
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D63.83
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F62.99
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.56
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.68
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G31.45
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.83
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I71.02
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E31.04
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.71
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G62.39
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H18.98
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I810.19
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B67.11
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.69
accessory axillary lymph node, adult.CNhs10475.1063-29H93.88
adrenal gland, adult.CNhs10508.49-24D70.74
adrenal gland, embryo E14.CNhs11038.406-44C51.21
adrenal gland, embryo E16.CNhs11004.1254-43D61.52
adrenal gland, embryo E17.CNhs11043.1263-45I11.38
adrenal gland, embryo E18.CNhs11026.1262-18F51.66
adrenal gland, neonate N00.CNhs11191.1311-23C12.82
adrenal gland, neonate N25.CNhs11223.1377-27I31.13
amnion, adult pregnant day17.5.CNhs10488.583-22A80.49
aorta, adult.CNhs10498.46-23H10.58
bone (os femoris), adult.CNhs10483.56-12G21.77
bone (os femoris), neonate N02.CNhs11227.1985-43F54.04
bone (os femoris), neonate N16.CNhs11225.1525-43A61.55
bone (os femoris), neonate N20.CNhs11195.1350-25C32.91
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B28.49
cerebellum, neonate N30.CNhs11135.1395-42I216.97
colon, adult.CNhs10468.36-18H71.02
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.84
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D41.02
corpora quadrigemina, adult.CNhs10501.16-22A45.54
corpus striatum, adult.CNhs10487.19-21D814.18
corpus striatum, neonate N00.CNhs11226.630-43F14.77
cortex, adult.CNhs10473.12-14D510.95
cortex, neonate N30.CNhs11107.1392-42F213.30
diencephalon, adult.CNhs10482.20-12F23.95
diencephalon, neonate N30.CNhs11201.1388-42B210.38
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.53
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.49
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G42.10
eyeball, embryo E12.CNhs11016.345-16C60.39
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C91.26
eyeball, embryo E17.CNhs11023.1261-18D40.45
eyeball, neonate N00.CNhs11207.633-15C61.91
eyeball, neonate N01.CNhs11140.1532-43E71.41
eyeball, neonate N02.CNhs11205.1551-44G82.34
eyeball, neonate N16.CNhs11188.777-19A26.21
forelimb, embryo E11.CNhs10596.335-25E20.43
forelimb, embryo E12.CNhs10600.359-14H20.95
forelimb, embryo E13.CNhs10589.384-1E21.94
forelimb, embryo E14.CNhs10577.413-26A81.10
forelimb, embryo E15.CNhs11007.437-20E72.22
forelimb, embryo E17.CNhs10598.1517-43C43.48
forelimb, embryo E18.CNhs11008.1520-43B52.68
gonad, embryo E13.CNhs11044.1564-45I60.80
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.70
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.26
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.57
heart, embryo E11.CNhs10586.331-24E91.04
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I91.62
heart, embryo E14.CNhs10597.403-26D42.60
heart, embryo E15.CNhs11017.431-16C83.34
heart, embryo E16.CNhs11021.457-17C63.24
heart, embryo E17.CNhs11025.479-18E54.19
heart, embryo E18.CNhs11030.1283-20G33.49
heart, neonate N00.CNhs11213.639-21E36.31
heart, neonate N03.CNhs11221.1349-25I24.77
heart, neonate N10.CNhs11118.749-24G117.57
heart, neonate N16.CNhs11209.782-15G120.92
heart, neonate N20.CNhs11127.821-26I616.37
heart, neonate N25.CNhs11196.1351-25D317.78
heart, neonate N30.CNhs11202.1390-42D210.07
hippocampus, adult.CNhs10478.13-16E84.42
hippocampus, neonate N00.CNhs11228.627-43G12.16
intestinal mucosa, adult.CNhs10506.860-29I30.66
intestine, adult.CNhs10496.178-9A30.53
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D51.16
intestine, embryo E15.CNhs10602.976-16D80.39
intestine, embryo E16.CNhs10585.463-22H41.41
intestine, embryo E17.CNhs10582.482-18D30.89
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.49
intestine, neonate N06.CNhs11102.688-20B80.50
intestine, neonate N07.CNhs11095.720-20F20.80
intestine, neonate N10.CNhs11098.755-23A51.36
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.86
intestine, neonate N30.CNhs11131.1384-42G10.40
kidney, embryo E14.CNhs10606.411-4I90.38
kidney, embryo E15.CNhs10997.434-16F80.34
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.78
kidney, neonate N00.CNhs11214.646-21G70.98
kidney, neonate N10.CNhs11206.758-6D51.14
kidney, neonate N20.CNhs11113.832-19I11.18
kidney, neonate N25.CNhs11122.1353-25F31.73
kidney, neonate N30.CNhs11203.1385-42H10.62
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.24
liver, embryo E17.CNhs10510.481-18A30.51
liver, embryo E18.CNhs10579.499-43G40.29
liver, neonate N00.CNhs11117.641-24F40.65
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A30.25
liver, neonate N25.CNhs11198.1368-26H10.54
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B11.85
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.49
lung, embryo E15.CNhs11020.432-17C51.19
lung, embryo E16.CNhs10998.458-17B60.94
lung, embryo E17.CNhs10605.480-44A61.68
lung, embryo E18.CNhs10583.1287-20I61.67
lung, neonate N00.CNhs11224.640-42C60.59
lung, neonate N06.CNhs11212.683-20E53.00
lung, neonate N07.CNhs11111.715-19A33.10
lung, neonate N10.CNhs11219.750-23E61.28
lung, neonate N20.CNhs11109.822-18A42.13
lung, neonate N25.CNhs11119.1359-25C72.07
lung, neonate N30.CNhs11133.1394-42H22.46
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A11.51
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A12.18
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H20.83
medulla oblongata, adult.CNhs10477.17-12C23.37
medulla oblongata, neonate N30.CNhs11200.1396-42A33.28
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C22.52
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.63
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.95
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.22
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D71.67
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D81.78
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.85
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D41.21
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D52.05
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D62.77
olfactory brain, adult.CNhs10489.18-22I94.82
ovary, adult.CNhs10507.91-2I72.13
ovary, embryo E18.CNhs11040.505-44H70.36
ovary, neonate N00.CNhs11217.1299-22I41.47
oviduct, adult pregnant day01.CNhs10500.988-6G62.97
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.49
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.38
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D82.14
pancreas, neonate N16.CNhs11136.787-43B60.63
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G89.87
pituitary gland, embryo E12.CNhs11018.346-16E60.54
pituitary gland, embryo E13.CNhs11009.370-44C70.39
pituitary gland, embryo E14.CNhs11037.398-44A50.64
pituitary gland, embryo E15.CNhs10592.427-16B91.77
pituitary gland, embryo E16.CNhs11036.449-43F62.50
pituitary gland, embryo E17.CNhs11039.1265-44F51.48
pituitary gland, neonate N00.CNhs11190.1308-22E92.44
placenta, adult pregnant day10.CNhs10472.539-13I70.94
placenta, adult pregnant day17.CNhs10464.577-18G30.85
prostate, adult.CNhs10470.859-1F80.44
skin, adult.CNhs10492.30-1C34.45
skin, neonate N00.CNhs11124.650-25G41.94
skin, neonate N03.CNhs11215.662-22H31.63
skin, neonate N06.CNhs11097.693-20I51.07
skin, neonate N10.CNhs11108.762-6C40.82
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C92.97
spleen, adult.CNhs10465.25-2G20.68
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F21.11
spleen, neonate N10.CNhs11116.752-24D11.51
spleen, neonate N20.CNhs11112.824-19H10.41
spleen, neonate N25.CNhs11099.1354-25G31.60
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C63.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C91.26
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D33.59
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E30.63
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.65
stomach, embryo E17.CNhs11006.1035-18D50.42
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.54
stomach, neonate N07.CNhs11210.718-18A91.57
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.78
submandibular gland, adult.CNhs10469.59-29C12.49
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F51.50
testis, embryo E15.CNhs11034.443-27C51.65
testis, embryo E16.CNhs11033.470-26G50.78
testis, embryo E17.CNhs11029.486-18I50.39
testis, embryo E18.CNhs11027.503-18G51.35
testis, neonate N00.CNhs11189.1300-22B72.23
testis, neonate N07.CNhs11222.726-26I42.21
testis, neonate N10.CNhs11204.763-44D92.31
testis, neonate N20.CNhs11110.839-18H32.17
testis, neonate N30.CNhs11130.1391-42E22.02
thymus, adult.CNhs10471.38-12B53.16
thymus, embryo E14.CNhs11041.402-44I40.61
thymus, embryo E15.CNhs11005.430-45I21.95
thymus, embryo E16.CNhs11002.456-26C52.21
thymus, embryo E17.CNhs10581.478-18C11.61
thymus, embryo E18.CNhs10595.1273-19G41.59
thymus, neonate N02.CNhs11181.1541-43F81.92
thymus, neonate N03.CNhs11137.2104-43C72.66
thymus, neonate N06.CNhs11197.681-26C41.31
thymus, neonate N07.CNhs11211.713-19D31.60
thymus, neonate N10.CNhs11194.748-24E41.71
thymus, neonate N20.CNhs11186.820-7A22.05
thymus, neonate N25.CNhs11125.1362-25G71.64
thymus, neonate N30.CNhs11132.1393-42G21.64
tongue, adult.CNhs10499.32-1B43.17
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.67
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E41.93
uterus, adult pregnant day19.CNhs10497.590-15F50.94
uterus, adult.CNhs10509.92-27E52.01
vagina, adult.CNhs10502.89-27D51.29
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A110.73
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A212.43
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A311.46
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D79.62
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A414.39
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A515.11
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A69.45
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A717.11
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A812.69
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A918.12
whole body, embryo E11.CNhs11014.324-5I80.31
whole body, embryo E12.CNhs10587.857-27C91.20
whole body, embryo E13.CNhs10512.372-23H20.34
whole body, embryo E14.5.CNhs10578.420-27D21.22
whole body, embryo E14.CNhs10519.395-14B11.26
whole body, embryo E16.CNhs10514.453-14F21.29
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.56
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G52.88
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G52.78
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G53.30
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.51
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G52.43
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G52.18
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G52.99
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G53.81
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.51
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G52.51
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.47
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.91
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G52.66
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G52.62
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G52.18
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G52.07
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G52.28
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G52.56
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.84
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G52.04
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G52.81
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.90
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.97
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G52.17
whole body, embryo E17.5.CNhs10513.490-9F90.96
whole body, embryo E17.CNhs10517.475-3I52.50
whole body, embryo E18.CNhs10516.493-3B31.87
whole body, neonate N00.CNhs10525.657-19C21.93
whole body, neonate N01.CNhs10576.659-23C62.10
whole body, neonate N06.CNhs10515.692-21D14.19
whole body, neonate N10.CNhs10518.761-6B43.01





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
structure with developmental contribution from neural crest7.71e-1592
regional part of nervous system2.09e-1254
central nervous system2.20e-1273
neural tube1.53e-1152
neural rod1.53e-1152
future spinal cord1.53e-1152
neural keel1.53e-1152
nervous system2.35e-1175
brain2.59e-1147
future brain2.59e-1147
regional part of brain7.79e-1146
ectoderm-derived structure6.01e-1095
ectoderm6.01e-1095
presumptive ectoderm6.01e-1095
neurectoderm2.16e-0964
neural plate2.16e-0964
presumptive neural plate2.16e-0964
gray matter5.73e-0934
cerebral cortex7.52e-0921
cerebral hemisphere7.52e-0921
pallium7.52e-0921
anterior neural tube7.60e-0940
brain grey matter1.04e-0829
regional part of telencephalon1.04e-0829
telencephalon1.04e-0829
ecto-epithelium1.41e-0873
regional part of forebrain2.20e-0839
forebrain2.20e-0839
future forebrain2.20e-0839
occipital lobe3.43e-0810
visual cortex3.43e-0810
neocortex3.43e-0810
regional part of cerebral cortex4.01e-0817
pre-chordal neural plate1.12e-0749
anatomical conduit1.85e-07122
tube2.54e-07114







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