FFCP PHASE1:Hg19::chr9:4985343..4985365,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=3717|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=6192|TSSclassifier=S|UniProt=O60674|association_with_transcript=98bp_to_ENST00000381652,NM_004972,uc003ziw.2_5end|description=CAGE_peak_5_at_JAK2_5end|id=chr9:4985343..4985365,+|ontology_enrichment_celltype=CL:0000037!2.88e-22!172;CL:0000566!2.88e-22!172;CL:0002032!1.83e-21!165;CL:0000837!1.83e-21!165;CL:0000763!2.56e-20!112;CL:0000049!2.56e-20!112;CL:0000988!3.29e-20!182;CL:0000738!2.14e-15!140;CL:0002031!9.90e-15!124;CL:0000557!8.81e-14!71;CL:0000839!1.84e-13!70;CL:0002057!1.84e-13!42;CL:0002087!6.64e-13!119;CL:0000766!9.87e-13!76;CL:0000860!2.92e-12!45;CL:0002009!1.42e-11!65;CL:0002194!5.47e-11!63;CL:0000576!5.47e-11!63;CL:0000040!5.47e-11!63;CL:0000559!5.47e-11!63;CL:0002320!1.91e-07!365|ontology_enrichment_celltype_v019=CL:0000860;2.30e-14;33!CL:0002057;2.30e-14;33!CL:0000576;3.86e-12;48!CL:0000473;1.25e-11;39!CL:0000234;1.25e-11;39!CL:0000766;1.77e-11;69!CL:0000763;7.44e-10;100|ontology_enrichment_celltype_v019_2=CL:0000763,1.32e-26,108;CL:0000049,1.32e-26,108;CL:0000860,4.43e-24,42;CL:0002057,4.43e-24,42;CL:0000037,9.44e-23,168;CL:0000988,1.23e-21,177;CL:0000473,1.80e-21,48;CL:0000234,1.80e-21,48;CL:0002032,2.38e-21,161;CL:0000837,2.38e-21,161;CL:0000839,2.99e-20,66;CL:0000766,1.98e-19,72;CL:0000557,1.00e-18,67;CL:0002194,7.65e-17,59;CL:0000576,7.65e-17,59;CL:0000040,7.65e-17,59;CL:0000559,7.65e-17,59;CL:0002009,5.15e-16,61;CL:0000738,1.48e-14,136;CL:0002031,4.70e-14,120;CL:0002087,1.06e-12,115;CL:0002393,2.32e-09,9;CL:0002397,2.32e-09,9;CL:0002320,7.73e-08,361;CL:0000134,1.69e-07,354|ontology_enrichment_development_v019=CL:0002057;2.15e-17;42!CL:0000049;1.71e-08;108|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!7.11e-18!102;UBERON:0003061!7.11e-18!102;UBERON:0002193!2.88e-17!112;UBERON:0002371!1.33e-12!80;UBERON:0001474!5.43e-11!86;UBERON:0002405!1.54e-09!115;UBERON:0004765!3.99e-09!101;UBERON:0001434!3.99e-09!101;UBERON:0002384!9.80e-07!375|ontology_enrichment_uberon_v019=UBERON:0000178;7.00e-08;15!UBERON:0000179;7.00e-08;15!UBERON:0000463;7.00e-08;15|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.63e-20,98;UBERON:0003061,1.63e-20,98;UBERON:0002193,1.11e-18,108;UBERON:0002371,9.87e-17,76;UBERON:0001474,8.57e-15,82;UBERON:0004765,1.73e-13,90;UBERON:0002405,5.45e-13,93;UBERON:0001434,3.47e-11,100;UBERON:0003081,4.69e-08,203;UBERON:0000178,6.69e-08,15;UBERON:0000179,6.69e-08,15;UBERON:0000463,6.69e-08,15;UBERON:0002384,1.39e-07,371|phase1_expression=0.181678379270557,1.2846031433459,0.140954404095971,1.0007329835313,0.893922188854576,0.872338524100369,0,0.631719873426831,0,0,0,0.655324116390517,0,0.495065411840187,0.662794751455832,0,0,0.730310090387373,0,0.123121058076788,0.204000691244253,0.313454721478088,0,0,0.251085279189606,0.61130724598361,0.492603536699674,0.157421562627358,1.18009283054671,0.767658796194425,0.464448369948228,0,0,0.369754010166788,0,0.710846162437108,0.587200878669695,0.553995408531877,2.4065333696417,2.17010870715852,0.447830948479849,0.32389366601898,0.515151135268373,0.872389432677388,0.755751887377619,1.4555043671269,0.464858073811369,0,0.619412741790207,2.01384674625505,2.56160706529101,3.07426898855161,1.37898272294647,0,0,1.31769637679823,0,0.449446968890169,0.306083892370903,0.641858054152187,2.55734850319616,2.96866170168044,3.98927315243264,4.68847225585964,1.16083695451434,0,1.86846674698672,1.25624332628372,2.60741459210101,1.52032191293582,1.81619850790011,0.736555271975129,1.58231193720442,0.845021145247767,1.70083439972035,1.25795187305026,1.46027220490444,1.65194582125657,2.08943262706204,3.13514018115373,1.79025009479181,2.73996230646951,0,1.63841583378639,0.889509253863555,2.56038133539904,0.400395987036012,2.29900975981793,0,2.86216126360609,0.569212969109448,0.587237189370939,0.382273228125229,2.64342657158052,0,0.790152254325231,0.393419540227666,0.393010762749165,0,0.668745981562712,0,0.473447805734733,0,0.779873198196215,0.294605907474837,0.664601683750863,0.541607727530031,0.640456598628376,1.69077151827842,0.822189523018381,2.76350017785848,2.31842468588042,0.14828656316206,0,0,1.0197840842781,0.383220493601921,1.03088233644789,0.759059076058509,0.637130828648193,0,0,0.451725357233318,0.511946444617674,0,0.473554504088034,0.821127996921047,1.41124720257313,0.802320587350522,0.144824403882799,0,0,0,1.44575660953827,1.50401373190767,0.579386075843295,0,0.973269740605272,1.22895262313288,0.443458794925128,0.702678285545008,0.523916301990851,0,0.370784442784429,0.649094787309367,0.174129737299267,0.398873881556595,1.66943437013739,0,2.22874500797739,0,0,0.347140501607594,0.56530794192401,0,0,0,0.516833518338658,0.35576626268671,0.33472061276467,0,0,0,0,0,0.17859945656816,0.22452937262617,0.337834441449967,0,0,0.549605231791222,0,0,0.436094052142534,0,0.25326102332916,0.529636723252875,0.286836620748814,0.354668382198357,0,0,0,0.3112110353997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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=3717 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6192 | |||
|TSSclassifier=S | |||
|UniProt=O60674 | |||
|association_with_transcript=98bp_to_ENST00000381652,NM_004972,uc003ziw.2_5end | |||
|description=CAGE_peak_5_at_JAK2_5end | |||
|id=chr9:4985343..4985365,+ | |||
|ontology_enrichment_celltype=CL:0000037!2.88e-22!172;CL:0000566!2.88e-22!172;CL:0002032!1.83e-21!165;CL:0000837!1.83e-21!165;CL:0000763!2.56e-20!112;CL:0000049!2.56e-20!112;CL:0000988!3.29e-20!182;CL:0000738!2.14e-15!140;CL:0002031!9.90e-15!124;CL:0000557!8.81e-14!71;CL:0000839!1.84e-13!70;CL:0002057!1.84e-13!42;CL:0002087!6.64e-13!119;CL:0000766!9.87e-13!76;CL:0000860!2.92e-12!45;CL:0002009!1.42e-11!65;CL:0002194!5.47e-11!63;CL:0000576!5.47e-11!63;CL:0000040!5.47e-11!63;CL:0000559!5.47e-11!63;CL:0002320!1.91e-07!365 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.30e-14;33!CL:0002057;2.30e-14;33!CL:0000576;3.86e-12;48!CL:0000473;1.25e-11;39!CL:0000234;1.25e-11;39!CL:0000766;1.77e-11;69!CL:0000763;7.44e-10;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000763,1.32e-26,108;CL:0000049,1.32e-26,108;CL:0000860,4.43e-24,42;CL:0002057,4.43e-24,42;CL:0000037,9.44e-23,168;CL:0000988,1.23e-21,177;CL:0000473,1.80e-21,48;CL:0000234,1.80e-21,48;CL:0002032,2.38e-21,161;CL:0000837,2.38e-21,161;CL:0000839,2.99e-20,66;CL:0000766,1.98e-19,72;CL:0000557,1.00e-18,67;CL:0002194,7.65e-17,59;CL:0000576,7.65e-17,59;CL:0000040,7.65e-17,59;CL:0000559,7.65e-17,59;CL:0002009,5.15e-16,61;CL:0000738,1.48e-14,136;CL:0002031,4.70e-14,120;CL:0002087,1.06e-12,115;CL:0002393,2.32e-09,9;CL:0002397,2.32e-09,9;CL:0002320,7.73e-08,361;CL:0000134,1.69e-07,354 | |||
|ontology_enrichment_development_v019=CL:0002057;2.15e-17;42!CL:0000049;1.71e-08;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!7.11e-18!102;UBERON:0003061!7.11e-18!102;UBERON:0002193!2.88e-17!112;UBERON:0002371!1.33e-12!80;UBERON:0001474!5.43e-11!86;UBERON:0002405!1.54e-09!115;UBERON:0004765!3.99e-09!101;UBERON:0001434!3.99e-09!101;UBERON:0002384!9.80e-07!375 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;7.00e-08;15!UBERON:0000179;7.00e-08;15!UBERON:0000463;7.00e-08;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.63e-20,98;UBERON:0003061,1.63e-20,98;UBERON:0002193,1.11e-18,108;UBERON:0002371,9.87e-17,76;UBERON:0001474,8.57e-15,82;UBERON:0004765,1.73e-13,90;UBERON:0002405,5.45e-13,93;UBERON:0001434,3.47e-11,100;UBERON:0003081,4.69e-08,203;UBERON:0000178,6.69e-08,15;UBERON:0000179,6.69e-08,15;UBERON:0000463,6.69e-08,15;UBERON:0002384,1.39e-07,371 | |||
|phase1_expression=0.181678379270557,1.2846031433459,0.140954404095971,1.0007329835313,0.893922188854576,0.872338524100369,0,0.631719873426831,0,0,0,0.655324116390517,0,0.495065411840187,0.662794751455832,0,0,0.730310090387373,0,0.123121058076788,0.204000691244253,0.313454721478088,0,0,0.251085279189606,0.61130724598361,0.492603536699674,0.157421562627358,1.18009283054671,0.767658796194425,0.464448369948228,0,0,0.369754010166788,0,0.710846162437108,0.587200878669695,0.553995408531877,2.4065333696417,2.17010870715852,0.447830948479849,0.32389366601898,0.515151135268373,0.872389432677388,0.755751887377619,1.4555043671269,0.464858073811369,0,0.619412741790207,2.01384674625505,2.56160706529101,3.07426898855161,1.37898272294647,0,0,1.31769637679823,0,0.449446968890169,0.306083892370903,0.641858054152187,2.55734850319616,2.96866170168044,3.98927315243264,4.68847225585964,1.16083695451434,0,1.86846674698672,1.25624332628372,2.60741459210101,1.52032191293582,1.81619850790011,0.736555271975129,1.58231193720442,0.845021145247767,1.70083439972035,1.25795187305026,1.46027220490444,1.65194582125657,2.08943262706204,3.13514018115373,1.79025009479181,2.73996230646951,0,1.63841583378639,0.889509253863555,2.56038133539904,0.400395987036012,2.29900975981793,0,2.86216126360609,0.569212969109448,0.587237189370939,0.382273228125229,2.64342657158052,0,0.790152254325231,0.393419540227666,0.393010762749165,0,0.668745981562712,0,0.473447805734733,0,0.779873198196215,0.294605907474837,0.664601683750863,0.541607727530031,0.640456598628376,1.69077151827842,0.822189523018381,2.76350017785848,2.31842468588042,0.14828656316206,0,0,1.0197840842781,0.383220493601921,1.03088233644789,0.759059076058509,0.637130828648193,0,0,0.451725357233318,0.511946444617674,0,0.473554504088034,0.821127996921047,1.41124720257313,0.802320587350522,0.144824403882799,0,0,0,1.44575660953827,1.50401373190767,0.579386075843295,0,0.973269740605272,1.22895262313288,0.443458794925128,0.702678285545008,0.523916301990851,0,0.370784442784429,0.649094787309367,0.174129737299267,0.398873881556595,1.66943437013739,0,2.22874500797739,0,0,0.347140501607594,0.56530794192401,0,0,0,0.516833518338658,0.35576626268671,0.33472061276467,0,0,0,0,0,0.17859945656816,0.22452937262617,0.337834441449967,0,0,0.549605231791222,0,0,0.436094052142534,0,0.25326102332916,0.529636723252875,0.286836620748814,0.354668382198357,0,0,0,0.311211035399766,1.21239604862719,0.326923806226917,0.454072282934794,0.576175924479999,0,0.312160076830321,0,0,0,0.647491777472526,0.140450806702248,0,0.122834317311768,0.206651562351531,0,0.247266929278557,0,0,0.168336113954066,0,0.554128230968366,0,0.30648779579902,0.300476117813194,0.226864366320042,0.358779271377724,0.213557388818567,0,0,0.103052529238439,0.257640540045629,0.744467425326359,0.506328996723799,0.389748020644795,0.504867548488229,0.276149695926898,0.161646056818812,0.355009592516614,0,0,0.193260853163297,0.272746120590835,0.286804595389004,0,0.132529768321485,0.116193942869518,0.207322110030741,0.252320850875628,0,0,0,0,0,0.721879481669586,0.236613600079688,0.337169380156203,0,0.330881918197182,0,0,0.269662616320329,0.196221465125346,0.38474715694639,0,0,0,0,0,1.96565443335525,0,0,0,0.171567810298526,0.109750285408626,0,0,0.277765335475589,0.325808305310325,0,0,0.231860809950154,0.469634776943287,0.144366447761074,0.462985512576611,0.190254152234598,0,0.858486162094873,0.246217006087397,0.234004265139238,0.297262324577456,0,0,0.141775097242386,0,0,0,0.985326475791887,0.616339038092582,1.24396869324463,1.00883967391873,1.00993946741104,0.126995788584338,0,0,0,0,0.300343057843917,0.285826432630578,0.112131084345361,0,0.2933531432838,0.258543431515556,0,0,0.26593811658487,0,0,0,0,0.285955987316295,0,0,0,1.42156779497018,0,0,0,0.099972991182057,0,1.00451418286425,0,0,0,0,0.144781306667579,0,0.179060963239896,0.112085143993527,1.18218456121156,0.431255149719035,0.513372145118994,0.508189248444927,0,0.773288812777695,0,0,2.99602809578873,0,7.45947924184864,0.736148950314839,1.00034104211935,0.542530047399471,0,0,0,0,0.300946099727719,0,0,0.664225598535437,0.184369168541703,0.0868836144680828,0.195801157462741,1.37257369524342,1.24060815673732,0.647142602455851,1.38745825144478,0,1.66435439510497,0.604780586659361,0,0.460385919864187,0,0.256278298511402,0,0.321707842287215,0,0.154209693802656,0.177561725313127,0.0821271560138091,0.519254429183621,0.232420756919918,0,0.40101294060657,0.0920809889358963,0,0,0.262248829918848,0,0.15403067420883,0,0,0,0,0,0,0,0,0,0.254876273045038,0,0,1.53481913652154,1.0457418040996,0,0,0,0.721287081534056,0.366277859273374,0,0,0,0,0,0,0.15350367472613,0,0.322260734604821,0.290033387828457,0.340906509664404,0.267096106940212,0.165284915360978,0.768760269460425,0.638063562472921,1.4162089319777,0,0,0,0.308033580176089,0,0,0.37064843820784,0.429374660225974,0.372158369359667,0.949138274156178,0.571890581771475,0.511795582622668,1.28381696410176,0,0,0.179872457583315,0.274537029736055,0.589062011728432,0.202182481573316,0,0,0,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| |||
|short_description=p5@JAK2 | |||
}} |
Revision as of 09:07, 14 September 2013
Short description: | p5@JAK2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_JAK2_5end |
Coexpression cluster: | NA |
Association with transcript: | 98bp_to_ENST00000381652, NM_004972, uc003ziw.2_5end |
EntrezGene: | JAK2 |
HGNC: | 6192 |
UniProt: | O60674 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid cell | 1.32e-26 | 108 |
common myeloid progenitor | 1.32e-26 | 108 |
classical monocyte | 4.43e-24 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.43e-24 | 42 |
hematopoietic stem cell | 9.44e-23 | 168 |
hematopoietic cell | 1.23e-21 | 177 |
defensive cell | 1.80e-21 | 48 |
phagocyte | 1.80e-21 | 48 |
hematopoietic oligopotent progenitor cell | 2.38e-21 | 161 |
hematopoietic multipotent progenitor cell | 2.38e-21 | 161 |
myeloid lineage restricted progenitor cell | 2.99e-20 | 66 |
myeloid leukocyte | 1.98e-19 | 72 |
granulocyte monocyte progenitor cell | 1.00e-18 | 67 |
monopoietic cell | 7.65e-17 | 59 |
monocyte | 7.65e-17 | 59 |
monoblast | 7.65e-17 | 59 |
promonocyte | 7.65e-17 | 59 |
macrophage dendritic cell progenitor | 5.15e-16 | 61 |
leukocyte | 1.48e-14 | 136 |
hematopoietic lineage restricted progenitor cell | 4.70e-14 | 120 |
nongranular leukocyte | 1.06e-12 | 115 |
intermediate monocyte | 2.32e-09 | 9 |
CD14-positive, CD16-positive monocyte | 2.32e-09 | 9 |
connective tissue cell | 7.73e-08 | 361 |
mesenchymal cell | 1.69e-07 | 354 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.63e-20 | 98 |
blood island | 1.63e-20 | 98 |
hemolymphoid system | 1.11e-18 | 108 |
bone marrow | 9.87e-17 | 76 |
bone element | 8.57e-15 | 82 |
skeletal element | 1.73e-13 | 90 |
immune system | 5.45e-13 | 93 |
skeletal system | 3.47e-11 | 100 |
lateral plate mesoderm | 4.69e-08 | 203 |
blood | 6.69e-08 | 15 |
haemolymphatic fluid | 6.69e-08 | 15 |
organism substance | 6.69e-08 | 15 |
connective tissue | 1.39e-07 | 371 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.