FFCP PHASE1:Mm9::chr6:129541773..129541785,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=16643|HGNC=|MCL_coexpression_id=187|UniProt=E9Q3T9,O54707|association_with_transcript=-14bp_to_ENSMUST00000032268,ENSMUST00000112063_5end|description=CAGE_peak_3_at_Klrd1_5end|id=chr6:129541773..129541785,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000084,2.92e-24,11;CL:0000827,2.92e-24,11;CL:0000838,3.13e-22,12;CL:0000542,1.64e-20,13;CL:0000051,1.64e-20,13;CL:0002031,2.38e-18,25;CL:0000738,1.19e-15,17;CL:0002087,1.19e-15,17;CL:0000988,3.24e-14,32;CL:0002032,3.24e-14,32;CL:0000037,3.24e-14,32;CL:0000837,3.24e-14,32;CL:0000791,1.11e-13,9;CL:0000789,1.11e-13,9;CL:0002420,1.11e-13,9;CL:0002419,1.11e-13,9;CL:0000790,1.11e-13,9;CL:0002320,1.06e-09,46;CL:0000134,1.06e-09,46;CL:0000625,5.23e-09,1;CL:0000624,5.24e-09,8;CL:0000219,3.65e-08,54|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!8.50e-12!48;UBERON:0002405!2.55e-11!70;UBERON:0002390!1.38e-10!45;UBERON:0003061!1.38e-10!45;UBERON:0004177!2.66e-10!29;UBERON:0005057!4.46e-09!51;UBERON:0006562!1.50e-07!24;UBERON:0001557!1.50e-07!24;UBERON:0001042!1.50e-07!24;UBERON:0008814!1.50e-07!24;UBERON:0009145!1.50e-07!24;UBERON:0000077!5.19e-07!97;UBERON:0004119!5.30e-07!130;UBERON:0000925!5.30e-07!130;UBERON:0006595!5.30e-07!130;UBERON:0002370!7.18e-07!23;UBERON:0000974!7.18e-07!23;UBERON:0004807!7.18e-07!23;UBERON:0005058!7.18e-07!23;UBERON:0003351!7.18e-07!23;UBERON:0009113!7.18e-07!23;UBERON:0003295!7.18e-07!23;UBERON:0009722!7.18e-07!23;UBERON:0005562!7.18e-07!23;UBERON:0007690!7.18e-07!23|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.06e-09,46;UBERON:0000029,4.39e-09,1;UBERON:0001097,4.39e-09,1;UBERON:0003968,4.39e-09,1;UBERON:0001467,4.39e-09,1|phase1_expression=0,0,0,0,0,0,0,0,0,0,0.34243593645101,0,2.56801094896809,1.31130603628496,0.333109761815663,0.202475267389826,0,1.26184866143295,1.09691546884591,0.42438965179803,0.0850432901510698,1.78723712161594,1.82839852397255,0,0.22940928106717,0,0,0,0.190023419456374,0,0.443461021310609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.90144856804538,9.41062637598899,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,9.83963957859253,0.148442139064825,0,0,0,0,0,0,0,0.144599356919912,0.884610551949874,0,0.220841518460394,0,0,0,0,1.02182822083437,0.239630249011841,0,0.254140454146129,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257347907114715,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0.146199987425332,0,0,0,0,1.32167513193519,0,0,0,0,0,0,0,0.474529061544512,0,0,0,0,0,0.216138049874694,0.199141273254367,0,0,0,0,0,0,0,0,0,0.123397163921801,0,0,0.196558995113203,0,0.202860121388503,0,0.25462585178142,0.287696137450811,0,0,0,0.372140947668503,0,0,0.179397413521912,0.964887042726734,0.369506380333209,0,0,0,0,0,0,0,0.157635144106191,0,0.159454768657487,0.491589944147214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0,0,0,0.494910368917606,0,0,0.302323556964751,0,0,0,0,0,0,0.316036757935816,0,0,0,0,0,0,0,0,0,0,0.704015124191131,0,0.220528398054962,0.16488625294148,0,0.0603129249281559,0.238744688006273,0,0,0,1.02522528478712,0,0.185194527369712,0.188368457004691,0.546776910884101,0.686334519619568,0.339956859987711,0.139951452323658,0.138199973804424,0,0,0,0,0,0,0,0,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,0,0.205421914329655,0.129920822977795,0.179026695667481,0.39736270956253,0,0.147689527174577,0,0.0762068066549998,0.100826185136841,0.292373642219257,0.288635524920988,0.584384510907845,0.226730383615211,0,0,0,0.19318959403219,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0.45032120322422,0,0,0,0,0,0,0,0,0,0.206035057238894,0,0.252697211763798,0,0,0,0.0640251524048693,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p3@Klrd1}} | ||
|EntrezGene=16643 | |||
|HGNC= | |||
|MCL_coexpression_id=187 | |||
|UniProt=E9Q3T9,O54707 | |||
|association_with_transcript=-14bp_to_ENSMUST00000032268,ENSMUST00000112063_5end | |||
|description=CAGE_peak_3_at_Klrd1_5end | |||
|id=chr6:129541773..129541785,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000084,2.92e-24,11;CL:0000827,2.92e-24,11;CL:0000838,3.13e-22,12;CL:0000542,1.64e-20,13;CL:0000051,1.64e-20,13;CL:0002031,2.38e-18,25;CL:0000738,1.19e-15,17;CL:0002087,1.19e-15,17;CL:0000988,3.24e-14,32;CL:0002032,3.24e-14,32;CL:0000037,3.24e-14,32;CL:0000837,3.24e-14,32;CL:0000791,1.11e-13,9;CL:0000789,1.11e-13,9;CL:0002420,1.11e-13,9;CL:0002419,1.11e-13,9;CL:0000790,1.11e-13,9;CL:0002320,1.06e-09,46;CL:0000134,1.06e-09,46;CL:0000625,5.23e-09,1;CL:0000624,5.24e-09,8;CL:0000219,3.65e-08,54 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!8.50e-12!48;UBERON:0002405!2.55e-11!70;UBERON:0002390!1.38e-10!45;UBERON:0003061!1.38e-10!45;UBERON:0004177!2.66e-10!29;UBERON:0005057!4.46e-09!51;UBERON:0006562!1.50e-07!24;UBERON:0001557!1.50e-07!24;UBERON:0001042!1.50e-07!24;UBERON:0008814!1.50e-07!24;UBERON:0009145!1.50e-07!24;UBERON:0000077!5.19e-07!97;UBERON:0004119!5.30e-07!130;UBERON:0000925!5.30e-07!130;UBERON:0006595!5.30e-07!130;UBERON:0002370!7.18e-07!23;UBERON:0000974!7.18e-07!23;UBERON:0004807!7.18e-07!23;UBERON:0005058!7.18e-07!23;UBERON:0003351!7.18e-07!23;UBERON:0009113!7.18e-07!23;UBERON:0003295!7.18e-07!23;UBERON:0009722!7.18e-07!23;UBERON:0005562!7.18e-07!23;UBERON:0007690!7.18e-07!23 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.06e-09,46;UBERON:0000029,4.39e-09,1;UBERON:0001097,4.39e-09,1;UBERON:0003968,4.39e-09,1;UBERON:0001467,4.39e-09,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0.34243593645101,0,2.56801094896809,1.31130603628496,0.333109761815663,0.202475267389826,0,1.26184866143295,1.09691546884591,0.42438965179803,0.0850432901510698,1.78723712161594,1.82839852397255,0,0.22940928106717,0,0,0,0.190023419456374,0,0.443461021310609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.90144856804538,9.41062637598899,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,9.83963957859253,0.148442139064825,0,0,0,0,0,0,0,0.144599356919912,0.884610551949874,0,0.220841518460394,0,0,0,0,1.02182822083437,0.239630249011841,0,0.254140454146129,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257347907114715,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0.146199987425332,0,0,0,0,1.32167513193519,0,0,0,0,0,0,0,0.474529061544512,0,0,0,0,0,0.216138049874694,0.199141273254367,0,0,0,0,0,0,0,0,0,0.123397163921801,0,0,0.196558995113203,0,0.202860121388503,0,0.25462585178142,0.287696137450811,0,0,0,0.372140947668503,0,0,0.179397413521912,0.964887042726734,0.369506380333209,0,0,0,0,0,0,0,0.157635144106191,0,0.159454768657487,0.491589944147214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0,0,0,0.494910368917606,0,0,0.302323556964751,0,0,0,0,0,0,0.316036757935816,0,0,0,0,0,0,0,0,0,0,0.704015124191131,0,0.220528398054962,0.16488625294148,0,0.0603129249281559,0.238744688006273,0,0,0,1.02522528478712,0,0.185194527369712,0.188368457004691,0.546776910884101,0.686334519619568,0.339956859987711,0.139951452323658,0.138199973804424,0,0,0,0,0,0,0,0,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,0,0.205421914329655,0.129920822977795,0.179026695667481,0.39736270956253,0,0.147689527174577,0,0.0762068066549998,0.100826185136841,0.292373642219257,0.288635524920988,0.584384510907845,0.226730383615211,0,0,0,0.19318959403219,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0.45032120322422,0,0,0,0,0,0,0,0,0,0.206035057238894,0,0.252697211763798,0,0,0,0.0640251524048693,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p3@Klrd1 | |||
}} |
Revision as of 09:07, 14 September 2013
Short description: | p3@Klrd1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Klrd1_5end |
Coexpression cluster: | MCL_coexpression_mm9:187 |
Association with transcript: | -14bp_to_ENSMUST00000032268, ENSMUST00000112063_5end |
EntrezGene: | Klrd1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
T cell | 2.92e-24 | 11 |
pro-T cell | 2.92e-24 | 11 |
lymphoid lineage restricted progenitor cell | 3.13e-22 | 12 |
lymphocyte | 1.64e-20 | 13 |
common lymphoid progenitor | 1.64e-20 | 13 |
hematopoietic lineage restricted progenitor cell | 2.38e-18 | 25 |
leukocyte | 1.19e-15 | 17 |
nongranular leukocyte | 1.19e-15 | 17 |
hematopoietic cell | 3.24e-14 | 32 |
hematopoietic oligopotent progenitor cell | 3.24e-14 | 32 |
hematopoietic stem cell | 3.24e-14 | 32 |
hematopoietic multipotent progenitor cell | 3.24e-14 | 32 |
mature alpha-beta T cell | 1.11e-13 | 9 |
alpha-beta T cell | 1.11e-13 | 9 |
immature T cell | 1.11e-13 | 9 |
mature T cell | 1.11e-13 | 9 |
immature alpha-beta T cell | 1.11e-13 | 9 |
connective tissue cell | 1.06e-09 | 46 |
mesenchymal cell | 1.06e-09 | 46 |
CD8-positive, alpha-beta T cell | 5.23e-09 | 1 |
CD4-positive, alpha-beta T cell | 5.24e-09 | 8 |
motile cell | 3.65e-08 | 54 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 1.06e-09 | 46 |
lymph node | 4.39e-09 | 1 |
axillary lymph node | 4.39e-09 | 1 |
peripheral lymph node | 4.39e-09 | 1 |
shoulder | 4.39e-09 | 1 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.