FFCP PHASE1:Hg19::chr9:37025731..37025750,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=W|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C651|description=CAGE_peak_at_chr9:37025731..37025750,-|id=chr9:37025731..37025750,-|ontology_enrichment_celltype=CL:0000945!1.25e-57!24;CL:0000826!1.25e-57!24;CL:0000236!6.97e-33!14;CL:0000542!1.82e-30!53;CL:0000051!1.82e-30!53;CL:0000838!1.34e-28!52;CL:0002087!1.30e-15!119;CL:0000738!3.22e-13!140;CL:0000037!3.96e-11!172;CL:0000566!3.96e-11!172;CL:0002031!3.07e-10!124;CL:0000988!4.28e-10!182;CL:0000842!5.28e-10!3;CL:0002032!3.44e-09!165;CL:0000837!3.44e-09!165;CL:0000224!1.33e-07!4|ontology_enrichment_celltype_v019=CL:0000945;4.63e-95;24!CL:0000236;8.17e-59;13!CL:0000542;1.63e-31;53!CL:0002087;3.87e-08;104!CL:0000946;5.16e-08;1!CL:0000786;5.16e-08;1|ontology_enrichment_celltype_v019_2=CL:0000945,5.29e-95,24;CL:0000826,5.29e-95,24;CL:0000236,4.69e-65,14;CL:0000838,1.76e-51,52;CL:0000542,1.97e-50,53;CL:0000051,1.97e-50,53;CL:0002087,8.95e-21,115;CL:0002031,9.66e-20,120;CL:0000738,6.08e-17,136;CL:0002032,1.12e-13,161;CL:0000837,1.12e-13,161;CL:0000037,6.20e-13,168;CL:0000988,4.57e-12,177;CL:0000946,4.99e-08,1;CL:0000786,4.99e-08,1;CL:0000980,4.99e-08,1|ontology_enrichment_development_v019=CL:0000051;1.63e-31;53!UBERON:0004872;6.56e-09;7!UBERON:0001045;1.59e-07;1|ontology_enrichment_disease=DOID:0060058!4.37e-08!10|ontology_enrichment_disease_v019=DOID:0060058;1.55e-10;10!DOID:630;3.32e-08;1!DOID:0050177;3.32e-08;1!DOID:0050427;3.32e-08;1!DOID:0060060;1.59e-07;1!DOID:0060061;1.59e-07;1!DOID:8691;1.59e-07;1!DOID:2355;1.59e-07;1|ontology_enrichment_disease_v019_2=DOID:0060058,1.74e-10,10;DOID:630,3.32e-08,1;DOID:0050177,3.32e-08,1;DOID:0050427,3.32e-08,1;DOID:0060060,1.54e-07,1;DOID:0060061,1.54e-07,1;DOID:8691,1.54e-07,1;DOID:2355,1.87e-07,1|ontology_enrichment_uberon=UBERON:0000178!4.34e-19!15;UBERON:0000179!4.34e-19!15;UBERON:0000463!4.34e-19!15;UBERON:0004177!3.50e-11!7;UBERON:0002106!8.85e-11!3;UBERON:0004854!8.85e-11!3;UBERON:0009034!8.85e-11!3;UBERON:0002095!8.85e-11!3;UBERON:0004782!8.85e-11!3;UBERON:0003281!8.85e-11!3;UBERON:0009664!8.85e-11!3;UBERON:0002296!8.85e-11!3;UBERON:0005602!8.85e-11!3;UBERON:0001179!8.85e-11!3;UBERON:0006293!8.85e-11!3;UBERON:0007023!2.15e-07!115;UBERON:0001829!3.70e-07!2|ontology_enrichment_uberon_v019=UBERON:0002106;7.98e-10;3!UBERON:0002372;1.00e-07;1!UBERON:0001961;1.00e-07;1!UBERON:0001744;1.00e-07;1!UBERON:0001042;1.00e-07;1!UBERON:0001735;1.00e-07;1!UBERON:0000029;1.59e-07;1!UBERON:0001154;1.59e-07;1!UBERON:0001153;1.59e-07;1!UBERON:0009854;1.59e-07;1|ontology_enrichment_uberon_v019_2=UBERON:0002106,8.16e-10,3;UBERON:0004854,8.16e-10,3;UBERON:0009034,8.16e-10,3;UBERON:0002095,8.16e-10,3;UBERON:0004782,8.16e-10,3;UBERON:0003281,8.16e-10,3;UBERON:0009664,8.16e-10,3;UBERON:0002296,8.16e-10,3;UBERON:0005602,8.16e-10,3;UBERON:0001179,8.16e-10,3;UBERON:0006293,8.16e-10,3;UBERON:0002372,9.10e-08,1;UBERON:0001961,9.10e-08,1;UBERON:0001744,9.10e-08,1;UBERON:0001735,9.10e-08,1;UBERON:0000029,1.26e-07,1;UBERON:0001154,1.35e-07,1;UBERON:0001153,1.35e-07,1;UBERON:0001045,1.35e-07,1|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.0931952840062,6.73224833489555,7.00525953691745,0,0,0.154816123316076,0,0,0,0,0.568676929949686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290209238628584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.51992488922645,2.18455444504853,3.55803701545422,3.84057200309856,6.80673177961221,4.02326707968138,3.30522436392431,2.86216126360609,2.27685187643779,3.52342313622563,11.4681968437569,1.32171328579026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.82707210449155,0.862856803274467,0.320182673410333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01489521846434,0.764637207142375,0,0.476463550915578,0.411362273086194,1.29694662238543,0.540031437238115,0,0,0,0,0.185803175125719,0,0,0,0,0,0,0,0,0,0,0,0,0.321176150207399,0.201799707191048,0,0,0,0.223676107892416,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211125408127993,0,1.93398740871803,0,0,6.52349468943668,0,0.0898683511473268,0,0,0.0986434056369336,2.3948309234694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=W | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C651 | |||
|description=CAGE_peak_at_chr9:37025731..37025750,- | |||
|id=chr9:37025731..37025750,- | |||
|ontology_enrichment_celltype=CL:0000945!1.25e-57!24;CL:0000826!1.25e-57!24;CL:0000236!6.97e-33!14;CL:0000542!1.82e-30!53;CL:0000051!1.82e-30!53;CL:0000838!1.34e-28!52;CL:0002087!1.30e-15!119;CL:0000738!3.22e-13!140;CL:0000037!3.96e-11!172;CL:0000566!3.96e-11!172;CL:0002031!3.07e-10!124;CL:0000988!4.28e-10!182;CL:0000842!5.28e-10!3;CL:0002032!3.44e-09!165;CL:0000837!3.44e-09!165;CL:0000224!1.33e-07!4 | |||
|ontology_enrichment_celltype_v019=CL:0000945;4.63e-95;24!CL:0000236;8.17e-59;13!CL:0000542;1.63e-31;53!CL:0002087;3.87e-08;104!CL:0000946;5.16e-08;1!CL:0000786;5.16e-08;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,5.29e-95,24;CL:0000826,5.29e-95,24;CL:0000236,4.69e-65,14;CL:0000838,1.76e-51,52;CL:0000542,1.97e-50,53;CL:0000051,1.97e-50,53;CL:0002087,8.95e-21,115;CL:0002031,9.66e-20,120;CL:0000738,6.08e-17,136;CL:0002032,1.12e-13,161;CL:0000837,1.12e-13,161;CL:0000037,6.20e-13,168;CL:0000988,4.57e-12,177;CL:0000946,4.99e-08,1;CL:0000786,4.99e-08,1;CL:0000980,4.99e-08,1 | |||
|ontology_enrichment_development_v019=CL:0000051;1.63e-31;53!UBERON:0004872;6.56e-09;7!UBERON:0001045;1.59e-07;1 | |||
|ontology_enrichment_disease=DOID:0060058!4.37e-08!10 | |||
|ontology_enrichment_disease_v019=DOID:0060058;1.55e-10;10!DOID:630;3.32e-08;1!DOID:0050177;3.32e-08;1!DOID:0050427;3.32e-08;1!DOID:0060060;1.59e-07;1!DOID:0060061;1.59e-07;1!DOID:8691;1.59e-07;1!DOID:2355;1.59e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,1.74e-10,10;DOID:630,3.32e-08,1;DOID:0050177,3.32e-08,1;DOID:0050427,3.32e-08,1;DOID:0060060,1.54e-07,1;DOID:0060061,1.54e-07,1;DOID:8691,1.54e-07,1;DOID:2355,1.87e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0000178!4.34e-19!15;UBERON:0000179!4.34e-19!15;UBERON:0000463!4.34e-19!15;UBERON:0004177!3.50e-11!7;UBERON:0002106!8.85e-11!3;UBERON:0004854!8.85e-11!3;UBERON:0009034!8.85e-11!3;UBERON:0002095!8.85e-11!3;UBERON:0004782!8.85e-11!3;UBERON:0003281!8.85e-11!3;UBERON:0009664!8.85e-11!3;UBERON:0002296!8.85e-11!3;UBERON:0005602!8.85e-11!3;UBERON:0001179!8.85e-11!3;UBERON:0006293!8.85e-11!3;UBERON:0007023!2.15e-07!115;UBERON:0001829!3.70e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0002106;7.98e-10;3!UBERON:0002372;1.00e-07;1!UBERON:0001961;1.00e-07;1!UBERON:0001744;1.00e-07;1!UBERON:0001042;1.00e-07;1!UBERON:0001735;1.00e-07;1!UBERON:0000029;1.59e-07;1!UBERON:0001154;1.59e-07;1!UBERON:0001153;1.59e-07;1!UBERON:0009854;1.59e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,8.16e-10,3;UBERON:0004854,8.16e-10,3;UBERON:0009034,8.16e-10,3;UBERON:0002095,8.16e-10,3;UBERON:0004782,8.16e-10,3;UBERON:0003281,8.16e-10,3;UBERON:0009664,8.16e-10,3;UBERON:0002296,8.16e-10,3;UBERON:0005602,8.16e-10,3;UBERON:0001179,8.16e-10,3;UBERON:0006293,8.16e-10,3;UBERON:0002372,9.10e-08,1;UBERON:0001961,9.10e-08,1;UBERON:0001744,9.10e-08,1;UBERON:0001735,9.10e-08,1;UBERON:0000029,1.26e-07,1;UBERON:0001154,1.35e-07,1;UBERON:0001153,1.35e-07,1;UBERON:0001045,1.35e-07,1 | |||
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|short_description=p@chr9:37025731..37025750,- | |||
}} |
Revision as of 09:01, 14 September 2013
Short description: | p@chr9:37025731..37025750, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr9:37025731..37025750, - |
Coexpression cluster: | C651_splenic_CD19_B_xeroderma_plasma_Burkitt_lymphoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 5.29e-95 | 24 |
pro-B cell | 5.29e-95 | 24 |
B cell | 4.69e-65 | 14 |
lymphoid lineage restricted progenitor cell | 1.76e-51 | 52 |
lymphocyte | 1.97e-50 | 53 |
common lymphoid progenitor | 1.97e-50 | 53 |
nongranular leukocyte | 8.95e-21 | 115 |
hematopoietic lineage restricted progenitor cell | 9.66e-20 | 120 |
leukocyte | 6.08e-17 | 136 |
hematopoietic oligopotent progenitor cell | 1.12e-13 | 161 |
hematopoietic multipotent progenitor cell | 1.12e-13 | 161 |
hematopoietic stem cell | 6.20e-13 | 168 |
hematopoietic cell | 4.57e-12 | 177 |
antibody secreting cell | 4.99e-08 | 1 |
plasma cell | 4.99e-08 | 1 |
plasmablast | 4.99e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
spleen | 8.16e-10 | 3 |
gastrointestinal system mesentery | 8.16e-10 | 3 |
stomach region | 8.16e-10 | 3 |
mesentery | 8.16e-10 | 3 |
gastrointestinal system serosa | 8.16e-10 | 3 |
mesentery of stomach | 8.16e-10 | 3 |
gut mesentery | 8.16e-10 | 3 |
dorsal mesentery | 8.16e-10 | 3 |
dorsal mesogastrium | 8.16e-10 | 3 |
peritoneal cavity | 8.16e-10 | 3 |
spleen primordium | 8.16e-10 | 3 |
tonsil | 9.10e-08 | 1 |
mucosa-associated lymphoid tissue | 9.10e-08 | 1 |
lymphoid tissue | 9.10e-08 | 1 |
tonsillar ring | 9.10e-08 | 1 |
lymph node | 1.26e-07 | 1 |
vermiform appendix | 1.35e-07 | 1 |
caecum | 1.35e-07 | 1 |
midgut | 1.35e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 1.74e-10 | 10 |
genetic disease | 3.32e-08 | 1 |
monogenic disease | 3.32e-08 | 1 |
xeroderma pigmentosum | 3.32e-08 | 1 |
non-Hodgkin lymphoma | 1.54e-07 | 1 |
cutaneous T cell lymphoma | 1.54e-07 | 1 |
mycosis fungoides | 1.54e-07 | 1 |
anemia | 1.87e-07 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.