FFCP PHASE1:Mm9::chr6:122576436..122576438,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=73708|HGNC=|MCL_coexpression_id=391|UniProt=Q8QZY3|association_with_transcript=-3bp_to_NM_139218,uc009dpn.1_5end|description=CAGE_peak_1_at_Dppa3_5end|id=chr6:122576436..122576438,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000991!2.46e-16!18;UBERON:0005564!2.46e-16!18;UBERON:0005156!2.72e-15!26;UBERON:0000990!2.72e-15!26;UBERON:0003133!3.46e-14!24;UBERON:0004176!5.76e-14!17;UBERON:0009196!5.76e-14!17;UBERON:0009117!5.76e-14!17;UBERON:0002370!1.30e-13!23;UBERON:0000974!1.30e-13!23;UBERON:0004807!1.30e-13!23;UBERON:0005058!1.30e-13!23;UBERON:0003351!1.30e-13!23;UBERON:0009113!1.30e-13!23;UBERON:0003295!1.30e-13!23;UBERON:0009722!1.30e-13!23;UBERON:0005562!1.30e-13!23;UBERON:0007690!1.30e-13!23;UBERON:0006562!5.87e-13!24;UBERON:0003408!5.87e-13!24;UBERON:0001557!5.87e-13!24;UBERON:0001042!5.87e-13!24;UBERON:0008814!5.87e-13!24;UBERON:0009145!5.87e-13!24;UBERON:0000072!2.74e-11!27;UBERON:0000992!1.19e-10!3;UBERON:0004177!2.29e-10!29;UBERON:0000474!1.62e-08!9;UBERON:0000063!3.06e-08!35;UBERON:0000065!3.87e-08!41;UBERON:0001004!6.85e-08!42;UBERON:0000473!1.18e-07!14;UBERON:0003135!4.25e-07!15;UBERON:0002323!5.78e-07!37;UBERON:0004458!5.78e-07!37;UBERON:0003100!6.59e-07!11;UBERON:0003886!9.87e-07!38|ontology_enrichment_uberon_v019_2=UBERON:0000992,1.12e-29,3;UBERON:0000991,1.36e-26,18;UBERON:0005564,1.36e-26,18;UBERON:0004176,8.88e-21,17;UBERON:0009196,8.88e-21,17;UBERON:0009117,8.88e-21,17;UBERON:0003133,6.06e-20,24;UBERON:0005156,2.09e-18,26;UBERON:0000990,2.09e-18,26;UBERON:0002323,6.63e-13,37;UBERON:0004458,6.63e-13,37;UBERON:0003886,1.46e-12,38;UBERON:0002553,3.10e-12,39;UBERON:0003134,1.35e-11,8;UBERON:0000474,2.23e-10,9;UBERON:0003100,1.33e-08,11;UBERON:0000473,5.04e-07,14|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.916554274652847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,19.9034266818493,0,0,0,0,0.703578179943289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.568474235311454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.67118400478862,4.45164009168138,8.79589580509311,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.49465875882444,0,0,0.119372344003136,1.80554989719567,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,45.6025465434135,59.5650565645551,5.44463327363333,0.904118764344118,0,0.117357238645754,0,0,0,0,0.948033361884535,0,0,0,0.358053391334963,0.39736270956253,0.360586348559907,0.295379054349154,0.908698049533329,0.609654453239999,0.302478555410522,1.65678397257579,0.769694733122636,0.350630706544707,0,0,0,0,0,0,0.36630324853453,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135804113845862,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p1@Dppa3}} | ||
|EntrezGene=73708 | |||
|HGNC= | |||
|MCL_coexpression_id=391 | |||
|UniProt=Q8QZY3 | |||
|association_with_transcript=-3bp_to_NM_139218,uc009dpn.1_5end | |||
|description=CAGE_peak_1_at_Dppa3_5end | |||
|id=chr6:122576436..122576438,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000991!2.46e-16!18;UBERON:0005564!2.46e-16!18;UBERON:0005156!2.72e-15!26;UBERON:0000990!2.72e-15!26;UBERON:0003133!3.46e-14!24;UBERON:0004176!5.76e-14!17;UBERON:0009196!5.76e-14!17;UBERON:0009117!5.76e-14!17;UBERON:0002370!1.30e-13!23;UBERON:0000974!1.30e-13!23;UBERON:0004807!1.30e-13!23;UBERON:0005058!1.30e-13!23;UBERON:0003351!1.30e-13!23;UBERON:0009113!1.30e-13!23;UBERON:0003295!1.30e-13!23;UBERON:0009722!1.30e-13!23;UBERON:0005562!1.30e-13!23;UBERON:0007690!1.30e-13!23;UBERON:0006562!5.87e-13!24;UBERON:0003408!5.87e-13!24;UBERON:0001557!5.87e-13!24;UBERON:0001042!5.87e-13!24;UBERON:0008814!5.87e-13!24;UBERON:0009145!5.87e-13!24;UBERON:0000072!2.74e-11!27;UBERON:0000992!1.19e-10!3;UBERON:0004177!2.29e-10!29;UBERON:0000474!1.62e-08!9;UBERON:0000063!3.06e-08!35;UBERON:0000065!3.87e-08!41;UBERON:0001004!6.85e-08!42;UBERON:0000473!1.18e-07!14;UBERON:0003135!4.25e-07!15;UBERON:0002323!5.78e-07!37;UBERON:0004458!5.78e-07!37;UBERON:0003100!6.59e-07!11;UBERON:0003886!9.87e-07!38 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000992,1.12e-29,3;UBERON:0000991,1.36e-26,18;UBERON:0005564,1.36e-26,18;UBERON:0004176,8.88e-21,17;UBERON:0009196,8.88e-21,17;UBERON:0009117,8.88e-21,17;UBERON:0003133,6.06e-20,24;UBERON:0005156,2.09e-18,26;UBERON:0000990,2.09e-18,26;UBERON:0002323,6.63e-13,37;UBERON:0004458,6.63e-13,37;UBERON:0003886,1.46e-12,38;UBERON:0002553,3.10e-12,39;UBERON:0003134,1.35e-11,8;UBERON:0000474,2.23e-10,9;UBERON:0003100,1.33e-08,11;UBERON:0000473,5.04e-07,14 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.916554274652847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,19.9034266818493,0,0,0,0,0.703578179943289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.568474235311454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.67118400478862,4.45164009168138,8.79589580509311,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.49465875882444,0,0,0.119372344003136,1.80554989719567,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,45.6025465434135,59.5650565645551,5.44463327363333,0.904118764344118,0,0.117357238645754,0,0,0,0,0.948033361884535,0,0,0,0.358053391334963,0.39736270956253,0.360586348559907,0.295379054349154,0.908698049533329,0.609654453239999,0.302478555410522,1.65678397257579,0.769694733122636,0.350630706544707,0,0,0,0,0,0,0.36630324853453,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135804113845862,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p1@Dppa3 | |||
}} |
Revision as of 08:47, 14 September 2013
Short description: | p1@Dppa3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Dppa3_5end |
Coexpression cluster: | MCL_coexpression_mm9:391 |
Association with transcript: | -3bp_to_NM_139218, uc009dpn.1_5end |
EntrezGene: | Dppa3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
female gonad | 1.12e-29 | 3 |
gonad | 1.36e-26 | 18 |
gonad primordium | 1.36e-26 | 18 |
external genitalia | 8.88e-21 | 17 |
indifferent external genitalia | 8.88e-21 | 17 |
indifferent gonad | 8.88e-21 | 17 |
reproductive organ | 6.06e-20 | 24 |
reproductive structure | 2.09e-18 | 26 |
reproductive system | 2.09e-18 | 26 |
body cavity | 6.63e-13 | 37 |
body cavity or lining | 6.63e-13 | 37 |
body cavity precursor | 1.46e-12 | 38 |
anatomical cavity | 3.10e-12 | 39 |
female reproductive organ | 1.35e-11 | 8 |
female reproductive system | 2.23e-10 | 9 |
female organism | 1.33e-08 | 11 |
testis | 5.04e-07 | 14 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.