FFCP PHASE1:Mm9::chr6:117124077..117124090,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=134|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr6:117124077..117124090,+|id=chr6:117124077..117124090,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000192,9.32e-23,3;CL:0000359,9.32e-23,3;CL:0002539,9.32e-23,3;CL:0000514,9.32e-23,3;CL:0000680,1.04e-11,6;CL:0000187,1.04e-11,6;CL:0000056,1.04e-11,6;CL:0000222,4.03e-10,7;CL:0000355,5.41e-08,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0001135,9.32e-23,3;UBERON:0004237,9.32e-23,3;UBERON:0004695,9.32e-23,3;UBERON:0002111,9.32e-23,3;UBERON:0004178,9.32e-23,3;UBERON:0000947,3.02e-17,4;UBERON:0001637,3.02e-17,4;UBERON:0004573,3.02e-17,4;UBERON:0003509,3.02e-17,4;UBERON:0004571,3.02e-17,4;UBERON:0010191,3.02e-17,4;UBERON:0004572,3.02e-17,4;UBERON:0000055,6.28e-14,5;UBERON:0007500,6.28e-14,5;UBERON:0001981,6.28e-14,5;UBERON:0002049,6.28e-14,5;UBERON:0007798,6.28e-14,5;UBERON:0004537,6.28e-14,5;UBERON:0006965,6.28e-14,5;UBERON:0001134,5.41e-08,9;UBERON:0002036,5.41e-08,9;UBERON:0002385,5.41e-08,9;UBERON:0000486,5.41e-08,9;UBERON:0007503,5.41e-08,9;UBERON:0001015,5.41e-08,9;UBERON:0002329,5.41e-08,9;UBERON:0003082,5.41e-08,9;UBERON:0003059,5.41e-08,9;UBERON:0007282,5.41e-08,9;UBERON:0004290,5.41e-08,9;UBERON:0009618,5.41e-08,9;UBERON:0000383,3.03e-07,10|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.89562681343828,2.33166941804883,2.75320128242522,1.56478268869608,0,0,0,0.419959264876088,0,0,0,0,0,0,0,0,0,0,0,0.889294796111139,0,1.97773272513395,0.7104801149461,0,0,0.103689612308478,0.405017814995072,0,0,0,0,0,0,0,0.127687338085188,0,0,0,0,0,0,0.30559649555362,0,0.142371680799103,0,0,0,0.289864488701678,0.860423876981386,0.679971333707751,0,0,0.448026887097336,0,20.1107780642108,32.2134645707557,22.9670723431721,0,2.56652954828636,0,0,0,0,0,0,0.776813650941515,0,0,0,0.230615497256059,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.509196819251581,0.124406970610093,0.252722758433675,0,0,0,0,0,0,0,0.0937017245597288,0,0,0.189106080167819,0,0,0,0,0,0,0,0,0,0,0.938104239924385,0.540186184383045,0.23674473558521,0,0.154267112887378,0.232533944750408,0.804820204198858,0,0,0.164167464079095,0,0.146199987425332,0,0.134206418760372,0,0,0,0,0.213288250535234,0,0,0,0,0,0,0.164698954724011,0,0,0,0,0.216138049874694,0.199141273254367,0,0,0,0,0.193952487167626,0.0701358198903186,0.252946148497029,0.295220295959204,0.31399745568275,0.123397163921801,0,0,0.196558995113203,0,0,0,0,0,0.162135226775035,0.274561413188081,2.87536413054709,1.11642284300551,0,0,0.179397413521912,0,0,0,0,0,0,0,0,0,0.157635144106191,0,0,0,0.172684981865896,0.144649058581512,0,0,0,0,0,0,0.163934945376675,0,0,0,0,0,0,0,0,0,0,0,0,0.35613120733451,0.162886959353576,0,0,0,0.302323556964751,0.188605079755898,0.590603785761546,0,0,0.363533729477506,0,0,0,0,0,0.36012218806262,0.517434735131018,0.214337035031592,0,0.178368817602071,0.164549020602121,0,0,0,0,0,0,0,0,0,0.291480836629851,0.18542530201051,0,0.206386867963223,0.925972636848558,0.188368457004691,0,0,0,0,0,0.954670618015114,0,0,0,0,0.218362563746178,0.134864346384821,0,0,0.129614973291793,0,0,0.149516546043979,0.496375471371293,0.194451188344048,0.387479470433193,0.844780627453891,0,0,0.104859344425711,0,0,0,0,0.205421914329655,0.129920822977795,0,0.198681354781265,0.120195449519969,0,0.100966449948148,0,0,0,0.192423683280659,0,0,0,0,0,0.386379188064381,0,0.183151624267265,0.214368379079066,0,0,0,0,0.171853182343688,0,0.755393897389701,0,0.45032120322422,0,0,0,0,0,0.243106717068294,0,0,0,0,0,0,0,0,0.0936415074698824,0.0640251524048693,0,0,0,0,0,0.294397840268795,1.02860775715625,0,0,0,0.0941093804153306,0.0846146078916765,0,0.263069711437843,0.135804113845862,0,0,0.29551344712669,0,0,0,0,0.233931608445408,0,0,0,0.231867835620421|short_description=p@chr6:117124077..117124090,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=134 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr6:117124077..117124090,+ | |||
|id=chr6:117124077..117124090,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000192,9.32e-23,3;CL:0000359,9.32e-23,3;CL:0002539,9.32e-23,3;CL:0000514,9.32e-23,3;CL:0000680,1.04e-11,6;CL:0000187,1.04e-11,6;CL:0000056,1.04e-11,6;CL:0000222,4.03e-10,7;CL:0000355,5.41e-08,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001135,9.32e-23,3;UBERON:0004237,9.32e-23,3;UBERON:0004695,9.32e-23,3;UBERON:0002111,9.32e-23,3;UBERON:0004178,9.32e-23,3;UBERON:0000947,3.02e-17,4;UBERON:0001637,3.02e-17,4;UBERON:0004573,3.02e-17,4;UBERON:0003509,3.02e-17,4;UBERON:0004571,3.02e-17,4;UBERON:0010191,3.02e-17,4;UBERON:0004572,3.02e-17,4;UBERON:0000055,6.28e-14,5;UBERON:0007500,6.28e-14,5;UBERON:0001981,6.28e-14,5;UBERON:0002049,6.28e-14,5;UBERON:0007798,6.28e-14,5;UBERON:0004537,6.28e-14,5;UBERON:0006965,6.28e-14,5;UBERON:0001134,5.41e-08,9;UBERON:0002036,5.41e-08,9;UBERON:0002385,5.41e-08,9;UBERON:0000486,5.41e-08,9;UBERON:0007503,5.41e-08,9;UBERON:0001015,5.41e-08,9;UBERON:0002329,5.41e-08,9;UBERON:0003082,5.41e-08,9;UBERON:0003059,5.41e-08,9;UBERON:0007282,5.41e-08,9;UBERON:0004290,5.41e-08,9;UBERON:0009618,5.41e-08,9;UBERON:0000383,3.03e-07,10 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.89562681343828,2.33166941804883,2.75320128242522,1.56478268869608,0,0,0,0.419959264876088,0,0,0,0,0,0,0,0,0,0,0,0.889294796111139,0,1.97773272513395,0.7104801149461,0,0,0.103689612308478,0.405017814995072,0,0,0,0,0,0,0,0.127687338085188,0,0,0,0,0,0,0.30559649555362,0,0.142371680799103,0,0,0,0.289864488701678,0.860423876981386,0.679971333707751,0,0,0.448026887097336,0,20.1107780642108,32.2134645707557,22.9670723431721,0,2.56652954828636,0,0,0,0,0,0,0.776813650941515,0,0,0,0.230615497256059,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.509196819251581,0.124406970610093,0.252722758433675,0,0,0,0,0,0,0,0.0937017245597288,0,0,0.189106080167819,0,0,0,0,0,0,0,0,0,0,0.938104239924385,0.540186184383045,0.23674473558521,0,0.154267112887378,0.232533944750408,0.804820204198858,0,0,0.164167464079095,0,0.146199987425332,0,0.134206418760372,0,0,0,0,0.213288250535234,0,0,0,0,0,0,0.164698954724011,0,0,0,0,0.216138049874694,0.199141273254367,0,0,0,0,0.193952487167626,0.0701358198903186,0.252946148497029,0.295220295959204,0.31399745568275,0.123397163921801,0,0,0.196558995113203,0,0,0,0,0,0.162135226775035,0.274561413188081,2.87536413054709,1.11642284300551,0,0,0.179397413521912,0,0,0,0,0,0,0,0,0,0.157635144106191,0,0,0,0.172684981865896,0.144649058581512,0,0,0,0,0,0,0.163934945376675,0,0,0,0,0,0,0,0,0,0,0,0,0.35613120733451,0.162886959353576,0,0,0,0.302323556964751,0.188605079755898,0.590603785761546,0,0,0.363533729477506,0,0,0,0,0,0.36012218806262,0.517434735131018,0.214337035031592,0,0.178368817602071,0.164549020602121,0,0,0,0,0,0,0,0,0,0.291480836629851,0.18542530201051,0,0.206386867963223,0.925972636848558,0.188368457004691,0,0,0,0,0,0.954670618015114,0,0,0,0,0.218362563746178,0.134864346384821,0,0,0.129614973291793,0,0,0.149516546043979,0.496375471371293,0.194451188344048,0.387479470433193,0.844780627453891,0,0,0.104859344425711,0,0,0,0,0.205421914329655,0.129920822977795,0,0.198681354781265,0.120195449519969,0,0.100966449948148,0,0,0,0.192423683280659,0,0,0,0,0,0.386379188064381,0,0.183151624267265,0.214368379079066,0,0,0,0,0.171853182343688,0,0.755393897389701,0,0.45032120322422,0,0,0,0,0,0.243106717068294,0,0,0,0,0,0,0,0,0.0936415074698824,0.0640251524048693,0,0,0,0,0,0.294397840268795,1.02860775715625,0,0,0,0.0941093804153306,0.0846146078916765,0,0.263069711437843,0.135804113845862,0,0,0.29551344712669,0,0,0,0,0.233931608445408,0,0,0,0.231867835620421 | |||
|short_description=p@chr6:117124077..117124090,+ | |||
}} |
Revision as of 08:38, 14 September 2013
Short description: | p@chr6:117124077..117124090, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr6:117124077..117124090, + |
Coexpression cluster: | MCL_coexpression_mm9:134 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell | 9.32e-23 | 3 |
vascular associated smooth muscle cell | 9.32e-23 | 3 |
aortic smooth muscle cell | 9.32e-23 | 3 |
smooth muscle myoblast | 9.32e-23 | 3 |
muscle precursor cell | 1.04e-11 | 6 |
muscle cell | 1.04e-11 | 6 |
myoblast | 1.04e-11 | 6 |
mesodermal cell | 4.03e-10 | 7 |
multi-potent skeletal muscle stem cell | 5.41e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
smooth muscle tissue | 9.32e-23 | 3 |
blood vessel smooth muscle | 9.32e-23 | 3 |
arterial system smooth muscle | 9.32e-23 | 3 |
artery smooth muscle tissue | 9.32e-23 | 3 |
aorta smooth muscle tissue | 9.32e-23 | 3 |
aorta | 3.02e-17 | 4 |
artery | 3.02e-17 | 4 |
systemic artery | 3.02e-17 | 4 |
arterial blood vessel | 3.02e-17 | 4 |
systemic arterial system | 3.02e-17 | 4 |
aortic system | 3.02e-17 | 4 |
arterial system | 3.02e-17 | 4 |
vessel | 6.28e-14 | 5 |
epithelial tube open at both ends | 6.28e-14 | 5 |
blood vessel | 6.28e-14 | 5 |
vasculature | 6.28e-14 | 5 |
vascular system | 6.28e-14 | 5 |
blood vasculature | 6.28e-14 | 5 |
vascular cord | 6.28e-14 | 5 |
skeletal muscle tissue | 5.41e-08 | 9 |
striated muscle tissue | 5.41e-08 | 9 |
muscle tissue | 5.41e-08 | 9 |
multilaminar epithelium | 5.41e-08 | 9 |
epithelial vesicle | 5.41e-08 | 9 |
musculature | 5.41e-08 | 9 |
somite | 5.41e-08 | 9 |
myotome | 5.41e-08 | 9 |
presomitic mesoderm | 5.41e-08 | 9 |
presumptive segmental plate | 5.41e-08 | 9 |
dermomyotome | 5.41e-08 | 9 |
trunk paraxial mesoderm | 5.41e-08 | 9 |
musculature of body | 3.03e-07 | 10 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.