FFCP PHASE1:Mm9::chr6:114266639..114266658,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=42|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr6:114266639..114266658,+|id=chr6:114266639..114266658,+|ontology_enrichment_celltype=CL:0002612!8.29e-09!3;CL:0000117!2.15e-07!23;CL:0000337!2.15e-07!23|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!2.64e-20!52;UBERON:0005068!2.64e-20!52;UBERON:0006241!2.64e-20!52;UBERON:0007135!2.64e-20!52;UBERON:0002346!5.00e-18!71;UBERON:0003075!5.00e-18!71;UBERON:0007284!5.00e-18!71;UBERON:0001017!1.27e-17!73;UBERON:0005743!1.27e-17!73;UBERON:0000073!5.27e-17!75;UBERON:0001016!5.27e-17!75;UBERON:0002020!1.22e-16!34;UBERON:0000033!2.01e-15!63;UBERON:0000955!3.72e-15!50;UBERON:0006238!3.72e-15!50;UBERON:0004121!1.50e-14!102;UBERON:0000924!1.50e-14!102;UBERON:0006601!1.50e-14!102;UBERON:0002616!1.13e-13!49;UBERON:0003076!2.66e-13!12;UBERON:0003057!2.66e-13!12;UBERON:0003056!1.05e-11!49;UBERON:0002240!4.16e-11!6;UBERON:0005174!4.16e-11!6;UBERON:0001137!4.16e-11!6;UBERON:0002791!8.02e-11!29;UBERON:0003528!8.02e-11!29;UBERON:0001893!8.02e-11!29;UBERON:0003080!3.85e-10!40;UBERON:0007811!5.59e-10!86;UBERON:0002780!6.77e-09!39;UBERON:0001890!6.77e-09!39;UBERON:0006240!6.77e-09!39;UBERON:0002257!8.29e-09!3;UBERON:0001948!8.62e-09!5;UBERON:0002315!8.62e-09!5;UBERON:0000153!1.02e-08!94;UBERON:0000956!3.23e-07!21;UBERON:0001869!3.23e-07!21;UBERON:0000203!3.23e-07!21;UBERON:0002619!5.26e-07!17;UBERON:0002298!7.00e-07!6;UBERON:0002021!8.69e-07!10;UBERON:0000411!8.69e-07!10;UBERON:0001950!8.69e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0002037,6.52e-23,4;UBERON:0002680,6.52e-23,4;UBERON:0001895,6.52e-23,4;UBERON:0010092,6.52e-23,4;UBERON:0006215,6.52e-23,4;UBERON:0004733,8.02e-16,6;UBERON:0004732,8.02e-16,6;UBERON:0002028,8.02e-16,6;UBERON:0007277,8.02e-16,6;UBERON:0003076,1.13e-08,12;UBERON:0003057,1.13e-08,12|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202316460859598,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220868540951614,0,0,0,0,0.127687338085188,0,0,0.0914876436024097,0,0.279182999001381,0,0.15279824777681,0.589257170947335,0.711858403995515,0.186399445825301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.585561594023094,9.84399522023239,0,0,0,0,0.299581278809645,0,0.251308704225729,0.869121600961382,0.255715457330331,0.62336413367868,0,0,0,0,0,0,0,0,0,0.0680364991513279,0.12811372028485,0.187403449119458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.841159794256509,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160550589987792,0,0,0,0,0,0,0,0,0,0,0,0,0.642642632843614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.556275906031529,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.460325236507177,0.572895513439397,0,0.685082519770642,0,0.675022500231806,0,0,0.51776031175182,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192075457214608,0,0.952587382566147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118635018124174,0,0,0,0,0.249810577937946,0.233931608445408,0,0,0,0|short_description=p@chr6:114266639..114266658,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=42 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr6:114266639..114266658,+ | |||
|id=chr6:114266639..114266658,+ | |||
|ontology_enrichment_celltype=CL:0002612!8.29e-09!3;CL:0000117!2.15e-07!23;CL:0000337!2.15e-07!23 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.64e-20!52;UBERON:0005068!2.64e-20!52;UBERON:0006241!2.64e-20!52;UBERON:0007135!2.64e-20!52;UBERON:0002346!5.00e-18!71;UBERON:0003075!5.00e-18!71;UBERON:0007284!5.00e-18!71;UBERON:0001017!1.27e-17!73;UBERON:0005743!1.27e-17!73;UBERON:0000073!5.27e-17!75;UBERON:0001016!5.27e-17!75;UBERON:0002020!1.22e-16!34;UBERON:0000033!2.01e-15!63;UBERON:0000955!3.72e-15!50;UBERON:0006238!3.72e-15!50;UBERON:0004121!1.50e-14!102;UBERON:0000924!1.50e-14!102;UBERON:0006601!1.50e-14!102;UBERON:0002616!1.13e-13!49;UBERON:0003076!2.66e-13!12;UBERON:0003057!2.66e-13!12;UBERON:0003056!1.05e-11!49;UBERON:0002240!4.16e-11!6;UBERON:0005174!4.16e-11!6;UBERON:0001137!4.16e-11!6;UBERON:0002791!8.02e-11!29;UBERON:0003528!8.02e-11!29;UBERON:0001893!8.02e-11!29;UBERON:0003080!3.85e-10!40;UBERON:0007811!5.59e-10!86;UBERON:0002780!6.77e-09!39;UBERON:0001890!6.77e-09!39;UBERON:0006240!6.77e-09!39;UBERON:0002257!8.29e-09!3;UBERON:0001948!8.62e-09!5;UBERON:0002315!8.62e-09!5;UBERON:0000153!1.02e-08!94;UBERON:0000956!3.23e-07!21;UBERON:0001869!3.23e-07!21;UBERON:0000203!3.23e-07!21;UBERON:0002619!5.26e-07!17;UBERON:0002298!7.00e-07!6;UBERON:0002021!8.69e-07!10;UBERON:0000411!8.69e-07!10;UBERON:0001950!8.69e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002037,6.52e-23,4;UBERON:0002680,6.52e-23,4;UBERON:0001895,6.52e-23,4;UBERON:0010092,6.52e-23,4;UBERON:0006215,6.52e-23,4;UBERON:0004733,8.02e-16,6;UBERON:0004732,8.02e-16,6;UBERON:0002028,8.02e-16,6;UBERON:0007277,8.02e-16,6;UBERON:0003076,1.13e-08,12;UBERON:0003057,1.13e-08,12 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202316460859598,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220868540951614,0,0,0,0,0.127687338085188,0,0,0.0914876436024097,0,0.279182999001381,0,0.15279824777681,0.589257170947335,0.711858403995515,0.186399445825301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.585561594023094,9.84399522023239,0,0,0,0,0.299581278809645,0,0.251308704225729,0.869121600961382,0.255715457330331,0.62336413367868,0,0,0,0,0,0,0,0,0,0.0680364991513279,0.12811372028485,0.187403449119458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.841159794256509,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160550589987792,0,0,0,0,0,0,0,0,0,0,0,0,0.642642632843614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.556275906031529,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.460325236507177,0.572895513439397,0,0.685082519770642,0,0.675022500231806,0,0,0.51776031175182,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192075457214608,0,0.952587382566147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118635018124174,0,0,0,0,0.249810577937946,0.233931608445408,0,0,0,0 | |||
|short_description=p@chr6:114266639..114266658,+ | |||
}} |
Revision as of 08:34, 14 September 2013
Short description: | p@chr6:114266639..114266658, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr6:114266639..114266658, + |
Coexpression cluster: | MCL_coexpression_mm9:42 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cerebellum | 6.52e-23 | 4 |
regional part of metencephalon | 6.52e-23 | 4 |
metencephalon | 6.52e-23 | 4 |
future metencephalon | 6.52e-23 | 4 |
rhombic lip | 6.52e-23 | 4 |
segmental subdivision of hindbrain | 8.02e-16 | 6 |
segmental subdivision of nervous system | 8.02e-16 | 6 |
hindbrain | 8.02e-16 | 6 |
presumptive hindbrain | 8.02e-16 | 6 |
posterior neural tube | 1.13e-08 | 12 |
chordal neural plate | 1.13e-08 | 12 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.