FFCP PHASE1:Mm9::chr5:93368946..93368957,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=132|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr5:93368946..93368957,+|id=chr5:93368946..93368957,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000213,2.98e-08,1;CL:0002078,2.98e-08,1;CL:0000115,2.98e-08,1;CL:0002262,2.98e-08,1;CL:1000398,2.98e-08,1|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000945!3.60e-08!16;UBERON:0010039!3.60e-08!16;UBERON:0005409!8.20e-07!59|ontology_enrichment_uberon_v019_2=UBERON:0001255,1.56e-08,1;UBERON:0001556,1.56e-08,1;UBERON:0002394,2.98e-08,1;UBERON:0001281,2.98e-08,1;UBERON:0000353,2.98e-08,1;UBERON:0003497,2.98e-08,1;UBERON:0003909,2.98e-08,1;UBERON:0003928,2.98e-08,1;UBERON:0003835,2.98e-08,1;UBERON:0003513,2.98e-08,1;UBERON:0001280,2.98e-08,1;UBERON:0004647,2.98e-08,1;UBERON:0002294,2.98e-08,1;UBERON:0001173,2.98e-08,1;UBERON:0004912,2.98e-08,1;UBERON:0005171,2.98e-08,1;UBERON:0000945,3.35e-07,16;UBERON:0010039,3.35e-07,16|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333109761815663,0,0,0,0,0,0.425216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.85592037554813,0.777719596297134,0.139986421625363,0,0,0,0,0.514518872071894,0,0,0,0,0,0.338844532069132,0,0.449949858640699,1.97773272513395,0.7104801149461,0,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0.151143120213571,2.02905142091174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0,0,0,0,0,0,0,0,0,1.44599356919912,0,0,0,0,0,0,0,1.78819938646014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0680364991513279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.660837565967596,1.85115396664481,0,0,0,0,0,0,1.89811624617805,0.494096864172033,0,0.198956472041151,0.58489226135736,0.898819408654221,0.648414149624083,0.995706366271836,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252578877947112,0,0,0.923765950833023,0,0,0,0,0,0,0,0.315270288212382,0.221464689648775,0,1.63863314715738,0.863424909329478,0.723245292907558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.709700426041343,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.661585194164886,0,0,0,0,0,0.874442509889552,0,0.170870880797853,0,0,0,0,0,0,0,0,1.90934123603023,0,0.203319467126849,0.216010681643603,0.209088296014469,0.655087691238533,2.02296519577231,2.47960367176008,3.14107130380836,0.777689839750757,0,0,0,0,0,0,0,0,0,0.209718688851422,0,0.288030006257865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.27310051354514,0.187682475451182,0,0.428736758158132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209613162627982,0.183843508450014,0,0.206035057238894,0,0,0,0,0,0.0640251524048693,0.0574354689556133,0,0,0,0,0.147198920134397,0,0.177475806159338,0,0,0.0941093804153306,0,0,0,0,0,0.118635018124174,0,0,0,0,0,0.233931608445408,0,0,0,0|short_description=p@chr5:93368946..93368957,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=132 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr5:93368946..93368957,+ | |||
|id=chr5:93368946..93368957,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000213,2.98e-08,1;CL:0002078,2.98e-08,1;CL:0000115,2.98e-08,1;CL:0002262,2.98e-08,1;CL:1000398,2.98e-08,1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000945!3.60e-08!16;UBERON:0010039!3.60e-08!16;UBERON:0005409!8.20e-07!59 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001255,1.56e-08,1;UBERON:0001556,1.56e-08,1;UBERON:0002394,2.98e-08,1;UBERON:0001281,2.98e-08,1;UBERON:0000353,2.98e-08,1;UBERON:0003497,2.98e-08,1;UBERON:0003909,2.98e-08,1;UBERON:0003928,2.98e-08,1;UBERON:0003835,2.98e-08,1;UBERON:0003513,2.98e-08,1;UBERON:0001280,2.98e-08,1;UBERON:0004647,2.98e-08,1;UBERON:0002294,2.98e-08,1;UBERON:0001173,2.98e-08,1;UBERON:0004912,2.98e-08,1;UBERON:0005171,2.98e-08,1;UBERON:0000945,3.35e-07,16;UBERON:0010039,3.35e-07,16 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333109761815663,0,0,0,0,0,0.425216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.85592037554813,0.777719596297134,0.139986421625363,0,0,0,0,0.514518872071894,0,0,0,0,0,0.338844532069132,0,0.449949858640699,1.97773272513395,0.7104801149461,0,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0.151143120213571,2.02905142091174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0,0,0,0,0,0,0,0,0,1.44599356919912,0,0,0,0,0,0,0,1.78819938646014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0680364991513279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.660837565967596,1.85115396664481,0,0,0,0,0,0,1.89811624617805,0.494096864172033,0,0.198956472041151,0.58489226135736,0.898819408654221,0.648414149624083,0.995706366271836,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252578877947112,0,0,0.923765950833023,0,0,0,0,0,0,0,0.315270288212382,0.221464689648775,0,1.63863314715738,0.863424909329478,0.723245292907558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.709700426041343,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.661585194164886,0,0,0,0,0,0.874442509889552,0,0.170870880797853,0,0,0,0,0,0,0,0,1.90934123603023,0,0.203319467126849,0.216010681643603,0.209088296014469,0.655087691238533,2.02296519577231,2.47960367176008,3.14107130380836,0.777689839750757,0,0,0,0,0,0,0,0,0,0.209718688851422,0,0.288030006257865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.27310051354514,0.187682475451182,0,0.428736758158132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209613162627982,0.183843508450014,0,0.206035057238894,0,0,0,0,0,0.0640251524048693,0.0574354689556133,0,0,0,0,0.147198920134397,0,0.177475806159338,0,0,0.0941093804153306,0,0,0,0,0,0.118635018124174,0,0,0,0,0,0.233931608445408,0,0,0,0 | |||
|short_description=p@chr5:93368946..93368957,+ | |||
}} |
Revision as of 08:21, 14 September 2013
Short description: | p@chr5:93368946..93368957, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr5:93368946..93368957, + |
Coexpression cluster: | MCL_coexpression_mm9:132 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lining cell | 2.98e-08 | 1 |
meso-epithelial cell | 2.98e-08 | 1 |
endothelial cell | 2.98e-08 | 1 |
endothelial cell of sinusoid | 2.98e-08 | 1 |
endothelial cell of hepatic sinusoid | 2.98e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
urinary bladder | 1.56e-08 | 1 |
lower urinary tract | 1.56e-08 | 1 |
bile duct | 2.98e-08 | 1 |
hepatic sinusoid | 2.98e-08 | 1 |
parenchyma | 2.98e-08 | 1 |
abdomen blood vessel | 2.98e-08 | 1 |
sinusoid | 2.98e-08 | 1 |
digestive system duct | 2.98e-08 | 1 |
abdominal segment blood vessel | 2.98e-08 | 1 |
trunk blood vessel | 2.98e-08 | 1 |
liver parenchyma | 2.98e-08 | 1 |
liver lobule | 2.98e-08 | 1 |
biliary system | 2.98e-08 | 1 |
biliary tree | 2.98e-08 | 1 |
biliary bud | 2.98e-08 | 1 |
hepatic duct | 2.98e-08 | 1 |
stomach | 3.35e-07 | 16 |
food storage organ | 3.35e-07 | 16 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.