FFCP PHASE1:Hg19::chr9:131872928..131873088,-: Difference between revisions
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{{FFCP | 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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=1384 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2342 | |||
|TSSclassifier=S | |||
|UniProt=P43155,C9JBD1,A6PVN3,F2Z2C5,B7ZBP5 | |||
|association_with_transcript=0bp_to_ENST00000318080,ENST00000351352,ENST00000393384,ENST00000441796,ENST00000455830,ENST00000458362,NM_000755,NR_028048,uc004bxh.2,uc004bxk.3_5end | |||
|description=CAGE_peak_1_at_CRAT_5end | |||
|id=chr9:131872928..131873088,- | |||
|ontology_enrichment_celltype=CL:0000055!1.09e-18!180;CL:0000183!6.35e-11!59;CL:0000057!2.63e-10!75;CL:0000192!3.12e-10!42;CL:0000514!3.12e-10!42;CL:0000222!1.88e-09!119;CL:0000680!4.70e-09!57;CL:0000056!4.70e-09!57;CL:0000355!4.70e-09!57;CL:0000187!6.49e-09!54;CL:0000359!8.97e-09!32;CL:0000393!5.27e-07!60;CL:0000211!5.27e-07!60 | |||
|ontology_enrichment_celltype_v019=CL:0000359;2.20e-08;32!CL:0000192;4.54e-08;43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000192,1.81e-10,43;CL:0000514,1.81e-10,43;CL:0000057,2.14e-10,76;CL:0000222,7.31e-10,121;CL:0000680,2.79e-09,58;CL:0000056,2.79e-09,58;CL:0000355,2.79e-09,58;CL:0000187,3.85e-09,55;CL:0000359,8.96e-09,32;CL:0000393,3.26e-07,61;CL:0000211,3.26e-07,61 | |||
|ontology_enrichment_development_v019=CL:0000514;4.54e-08;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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| |||
|short_description=p1@CRAT | |||
}} |
Revision as of 07:44, 14 September 2013
Short description: | p1@CRAT |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_CRAT_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000318080, ENST00000351352, ENST00000393384, ENST00000441796, ENST00000455830, ENST00000458362, NM_000755, NR_028048, uc004bxh.2, uc004bxk.3_5end |
EntrezGene: | CRAT |
HGNC: | 2342 |
UniProt: | P43155C9JBD1A6PVN3F2Z2C5B7ZBP5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell | 1.81e-10 | 43 |
smooth muscle myoblast | 1.81e-10 | 43 |
fibroblast | 2.14e-10 | 76 |
mesodermal cell | 7.31e-10 | 121 |
muscle precursor cell | 2.79e-09 | 58 |
myoblast | 2.79e-09 | 58 |
multi-potent skeletal muscle stem cell | 2.79e-09 | 58 |
muscle cell | 3.85e-09 | 55 |
vascular associated smooth muscle cell | 8.96e-09 | 32 |
electrically responsive cell | 3.26e-07 | 61 |
electrically active cell | 3.26e-07 | 61 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.