FFCP PHASE1:Hg19::chr9:131710317..131710335,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=22845|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=23406|TSSclassifier=S|UniProt=Q9UPQ8|association_with_transcript=-305bp_to_NM_014908,uc004bwr.2_5end|coexpression_cluster_id=C2759|description=CAGE_peak_3_at_DOLK_5end|id=chr9:131710317..131710335,-|ontology_enrichment_celltype=CL:0000738!6.07e-43!140;CL:0002031!1.14e-42!124;CL:0002087!7.24e-39!119;CL:0002057!4.29e-37!42;CL:0000860!1.15e-33!45;CL:0000557!8.00e-33!71;CL:0000988!4.25e-32!182;CL:0000037!5.49e-32!172;CL:0000566!5.49e-32!172;CL:0000766!1.10e-30!76;CL:0002032!6.15e-30!165;CL:0000837!6.15e-30!165;CL:0000839!8.28e-30!70;CL:0002009!1.40e-28!65;CL:0002194!2.66e-26!63;CL:0000576!2.66e-26!63;CL:0000040!2.66e-26!63;CL:0000559!2.66e-26!63;CL:0000763!1.43e-18!112;CL:0000049!1.43e-18!112;CL:0000134!1.15e-17!358;CL:0002320!1.05e-16!365;CL:0000034!1.17e-15!444;CL:0000048!2.28e-15!430;CL:0000219!8.12e-15!390;CL:0000723!1.11e-14!436;CL:0002393!3.65e-11!9;CL:0002397!3.65e-11!9;CL:0000838!4.85e-11!52;CL:0000542!1.12e-10!53;CL:0000051!1.12e-10!53;CL:0000236!3.65e-08!14;CL:0000080!6.10e-08!6;CL:0000840!1.13e-07!5;CL:0001029!1.13e-07!5;CL:0000144!3.92e-07!625;CL:0002371!5.10e-07!591;CL:0002274!5.30e-07!5;CL:0000457!5.30e-07!5;CL:0002191!5.30e-07!5;CL:0000097!5.30e-07!5;CL:0000831!5.30e-07!5;CL:0002028!5.30e-07!5|ontology_enrichment_celltype_v019=CL:0000860;1.13e-42;33!CL:0002057;1.13e-42;33!CL:0000473;1.43e-28;39!CL:0000234;1.43e-28;39!CL:0000576;2.54e-27;48!CL:0000766;9.51e-21;69!CL:0002087;6.16e-19;104!CL:0000097;1.84e-12;5!CL:0000623;1.04e-11;3!CL:0000738;1.16e-11;136!CL:0002393;9.93e-11;6!CL:0002397;9.93e-11;6!CL:0001014;2.17e-09;2!CL:0001016;2.17e-09;2!CL:0000988;5.05e-09;177!CL:0000542;8.44e-09;53!CL:0000763;1.43e-08;100!CL:0000236;3.12e-07;13!CL:0000163;6.15e-07;9|ontology_enrichment_celltype_v019_2=CL:0002031,7.00e-57,120;CL:0000738,4.48e-54,136;CL:0000860,9.41e-51,42;CL:0002057,9.41e-51,42;CL:0000557,9.49e-47,67;CL:0002087,1.15e-45,115;CL:0000473,1.34e-43,48;CL:0000234,1.34e-43,48;CL:0000988,3.17e-43,177;CL:0002032,5.36e-42,161;CL:0000837,5.36e-42,161;CL:0000037,6.69e-42,168;CL:0000839,8.87e-41,66;CL:0000766,1.30e-39,72;CL:0002009,1.45e-38,61;CL:0002194,1.37e-33,59;CL:0000576,1.37e-33,59;CL:0000040,1.37e-33,59;CL:0000559,1.37e-33,59;CL:0000763,3.45e-28,108;CL:0000049,3.45e-28,108;CL:0000134,1.94e-15,354;CL:0002320,6.15e-15,361;CL:0000219,3.62e-13,386;CL:0000034,7.55e-13,441;CL:0000838,1.38e-12,52;CL:0000097,2.31e-12,5;CL:0002028,2.31e-12,5;CL:0000542,2.77e-12,53;CL:0000051,2.77e-12,53;CL:0000048,8.35e-12,427;CL:0000623,1.17e-11,3;CL:0000825,1.17e-11,3;CL:0000723,1.71e-11,433;CL:0001014,2.09e-09,2;CL:0001016,2.09e-09,2;CL:0002393,4.03e-07,9;CL:0002397,4.03e-07,9;CL:0000163,6.93e-07,9;CL:0000236,8.73e-07,14|ontology_enrichment_development_v019=CL:0002057;5.31e-38;42!CL:0000051;8.44e-09;53|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!2.95e-29!102;UBERON:0003061!2.95e-29!102;UBERON:0002371!1.17e-28!80;UBERON:0001474!1.55e-26!86;UBERON:0002193!5.34e-26!112;UBERON:0004765!4.56e-20!101;UBERON:0001434!4.56e-20!101;UBERON:0002405!4.60e-19!115;UBERON:0002384!6.45e-16!375;UBERON:0002204!5.05e-12!167;UBERON:0003081!2.69e-10!216|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.28e-40,76;UBERON:0002390,8.29e-39,98;UBERON:0003061,8.29e-39,98;UBERON:0001474,6.93e-37,82;UBERON:0002193,1.84e-34,108;UBERON:0002405,6.73e-34,93;UBERON:0004765,5.87e-33,90;UBERON:0001434,6.33e-29,100;UBERON:0003081,1.33e-15,203;UBERON:0002204,1.54e-15,167;UBERON:0002384,2.98e-14,371;UBERON:0000926,3.67e-07,315;UBERON:0004120,3.67e-07,315;UBERON:0006603,3.67e-07,315|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.328402357799783,0.157421562627358,0.786728553697808,0.383829398097213,1.54816123316076,0,0,0,0.154934401160603,0,0.587200878669695,6.09394949385065,4.01088894940283,6.72733699219141,0,0,0,0,0.377875943688809,0.242584061187816,1.39457422143411,2.05583944010913,3.40677007984614,1.1507695692886,1.2808035326455,2.36482229888585,4.13694816883942,5.16387746867061,8.12558919566051,0,1.09162460023138,0.449446968890169,1.53041946185451,2.56743221660875,7.03270838378945,0,0,0.426224750532694,2.61188314765726,7.37600792098482,4.35975574296902,0,2.08593167368081,1.52032191293582,3.63239701580021,4.78760926783834,3.48108626184973,0.845021145247767,0.425208599930087,1.25795187305026,0.44931452458598,0.450530678524519,0.48217676009124,0.285012743741249,0.19891667719909,0.547992461293902,1.75996244461323,0.546138611262131,0.889509253863555,2.56038133539904,0.400395987036012,0,0,0.954053754535364,6.83055562931338,5.28513470433845,3.82273228125229,5.28685314316103,6.72610275577843,0.263384084775077,2.360517241366,0.393010762749165,1.64481199199607,0.167186495390678,0.32592226663359,0.473447805734733,0,0,0,0,0.812411591295047,0,0,0,0.276350017785848,0,0.14828656316206,0.535081656179426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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=22845 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23406 | |||
|TSSclassifier=S | |||
|UniProt=Q9UPQ8 | |||
|association_with_transcript=-305bp_to_NM_014908,uc004bwr.2_5end | |||
|coexpression_cluster_id=C2759 | |||
|description=CAGE_peak_3_at_DOLK_5end | |||
|id=chr9:131710317..131710335,- | |||
|ontology_enrichment_celltype=CL:0000738!6.07e-43!140;CL:0002031!1.14e-42!124;CL:0002087!7.24e-39!119;CL:0002057!4.29e-37!42;CL:0000860!1.15e-33!45;CL:0000557!8.00e-33!71;CL:0000988!4.25e-32!182;CL:0000037!5.49e-32!172;CL:0000566!5.49e-32!172;CL:0000766!1.10e-30!76;CL:0002032!6.15e-30!165;CL:0000837!6.15e-30!165;CL:0000839!8.28e-30!70;CL:0002009!1.40e-28!65;CL:0002194!2.66e-26!63;CL:0000576!2.66e-26!63;CL:0000040!2.66e-26!63;CL:0000559!2.66e-26!63;CL:0000763!1.43e-18!112;CL:0000049!1.43e-18!112;CL:0000134!1.15e-17!358;CL:0002320!1.05e-16!365;CL:0000034!1.17e-15!444;CL:0000048!2.28e-15!430;CL:0000219!8.12e-15!390;CL:0000723!1.11e-14!436;CL:0002393!3.65e-11!9;CL:0002397!3.65e-11!9;CL:0000838!4.85e-11!52;CL:0000542!1.12e-10!53;CL:0000051!1.12e-10!53;CL:0000236!3.65e-08!14;CL:0000080!6.10e-08!6;CL:0000840!1.13e-07!5;CL:0001029!1.13e-07!5;CL:0000144!3.92e-07!625;CL:0002371!5.10e-07!591;CL:0002274!5.30e-07!5;CL:0000457!5.30e-07!5;CL:0002191!5.30e-07!5;CL:0000097!5.30e-07!5;CL:0000831!5.30e-07!5;CL:0002028!5.30e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.13e-42;33!CL:0002057;1.13e-42;33!CL:0000473;1.43e-28;39!CL:0000234;1.43e-28;39!CL:0000576;2.54e-27;48!CL:0000766;9.51e-21;69!CL:0002087;6.16e-19;104!CL:0000097;1.84e-12;5!CL:0000623;1.04e-11;3!CL:0000738;1.16e-11;136!CL:0002393;9.93e-11;6!CL:0002397;9.93e-11;6!CL:0001014;2.17e-09;2!CL:0001016;2.17e-09;2!CL:0000988;5.05e-09;177!CL:0000542;8.44e-09;53!CL:0000763;1.43e-08;100!CL:0000236;3.12e-07;13!CL:0000163;6.15e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002031,7.00e-57,120;CL:0000738,4.48e-54,136;CL:0000860,9.41e-51,42;CL:0002057,9.41e-51,42;CL:0000557,9.49e-47,67;CL:0002087,1.15e-45,115;CL:0000473,1.34e-43,48;CL:0000234,1.34e-43,48;CL:0000988,3.17e-43,177;CL:0002032,5.36e-42,161;CL:0000837,5.36e-42,161;CL:0000037,6.69e-42,168;CL:0000839,8.87e-41,66;CL:0000766,1.30e-39,72;CL:0002009,1.45e-38,61;CL:0002194,1.37e-33,59;CL:0000576,1.37e-33,59;CL:0000040,1.37e-33,59;CL:0000559,1.37e-33,59;CL:0000763,3.45e-28,108;CL:0000049,3.45e-28,108;CL:0000134,1.94e-15,354;CL:0002320,6.15e-15,361;CL:0000219,3.62e-13,386;CL:0000034,7.55e-13,441;CL:0000838,1.38e-12,52;CL:0000097,2.31e-12,5;CL:0002028,2.31e-12,5;CL:0000542,2.77e-12,53;CL:0000051,2.77e-12,53;CL:0000048,8.35e-12,427;CL:0000623,1.17e-11,3;CL:0000825,1.17e-11,3;CL:0000723,1.71e-11,433;CL:0001014,2.09e-09,2;CL:0001016,2.09e-09,2;CL:0002393,4.03e-07,9;CL:0002397,4.03e-07,9;CL:0000163,6.93e-07,9;CL:0000236,8.73e-07,14 | |||
|ontology_enrichment_development_v019=CL:0002057;5.31e-38;42!CL:0000051;8.44e-09;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.95e-29!102;UBERON:0003061!2.95e-29!102;UBERON:0002371!1.17e-28!80;UBERON:0001474!1.55e-26!86;UBERON:0002193!5.34e-26!112;UBERON:0004765!4.56e-20!101;UBERON:0001434!4.56e-20!101;UBERON:0002405!4.60e-19!115;UBERON:0002384!6.45e-16!375;UBERON:0002204!5.05e-12!167;UBERON:0003081!2.69e-10!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.28e-40,76;UBERON:0002390,8.29e-39,98;UBERON:0003061,8.29e-39,98;UBERON:0001474,6.93e-37,82;UBERON:0002193,1.84e-34,108;UBERON:0002405,6.73e-34,93;UBERON:0004765,5.87e-33,90;UBERON:0001434,6.33e-29,100;UBERON:0003081,1.33e-15,203;UBERON:0002204,1.54e-15,167;UBERON:0002384,2.98e-14,371;UBERON:0000926,3.67e-07,315;UBERON:0004120,3.67e-07,315;UBERON:0006603,3.67e-07,315 | |||
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|short_description=p3@DOLK | |||
}} |
Revision as of 07:44, 14 September 2013
Short description: | p3@DOLK |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_DOLK_5end |
Coexpression cluster: | C2759_CD14_CD8_immature_Natural_CD34_CD19_Peripheral |
Association with transcript: | -305bp_to_NM_014908, uc004bwr.2_5end |
EntrezGene: | DOLK |
HGNC: | 23406 |
UniProt: | Q9UPQ8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.28e-40 | 76 |
hematopoietic system | 8.29e-39 | 98 |
blood island | 8.29e-39 | 98 |
bone element | 6.93e-37 | 82 |
hemolymphoid system | 1.84e-34 | 108 |
immune system | 6.73e-34 | 93 |
skeletal element | 5.87e-33 | 90 |
skeletal system | 6.33e-29 | 100 |
lateral plate mesoderm | 1.33e-15 | 203 |
musculoskeletal system | 1.54e-15 | 167 |
connective tissue | 2.98e-14 | 371 |
mesoderm | 3.67e-07 | 315 |
mesoderm-derived structure | 3.67e-07 | 315 |
presumptive mesoderm | 3.67e-07 | 315 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.