FFCP PHASE1:Hg19::chr9:131447342..131447360,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=6418|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=10760|TSSclassifier=S|UniProt=Q5VXV2|association_with_transcript=-1bp_to_ENST00000409104_5end|description=CAGE_peak_10_at_SET_5end|id=chr9:131447342..131447360,+|ontology_enrichment_celltype=CL:0000066!1.83e-11!254;CL:0002076!4.91e-08!43;CL:0000063!9.09e-08!578;CL:0000223!2.58e-07!59|ontology_enrichment_celltype_v019=CL:0000990;9.69e-09;8!CL:0000235;8.00e-08;6!CL:0000840;8.00e-08;5!CL:0002573;3.20e-07;2!CL:0000451;3.67e-07;10|ontology_enrichment_celltype_v019_2=CL:0000990,7.14e-09,8;CL:0000840,7.66e-08,5;CL:0001029,7.66e-08,5;CL:0000235,7.84e-08,6;CL:0000451,2.87e-07,10;CL:0002573,6.59e-07,2|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:0050687!1.01e-17!143;DOID:305!1.51e-17!106;DOID:14566!1.08e-16!239;DOID:162!8.36e-16!235;DOID:299!1.31e-07!25;DOID:1749!1.83e-07!14|ontology_enrichment_disease_v019=DOID:1749;1.49e-08;14|ontology_enrichment_disease_v019_2=DOID:0050687,4.20e-09,143;DOID:1749,1.26e-08,14;DOID:305,4.00e-07,106|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0.866364470720326,0,0,0,0,0,0,0,0,0.286235987131057,0.136874425072884,0,0.229240217243854,0.164201178899891,0.472264687882075,0,0.383829398097213,0.154816123316076,0.919421224478927,0.30120591877825,0.739508020333575,0,0.426507697462265,0,0,0,0,0.671746422719773,0,0.515151135268373,0.145398238779565,0.377875943688809,0,0,0,0,0,0.512321413058201,0.236482229888585,0,0.645484683583826,0,0,0.272906150057846,0.224723484445085,0.306083892370903,0,0,0.329851300186716,0.398927315243264,1.27867425159808,0,0,0,0.251248665256743,0,0.434377689410233,0,0,0,0.422510572623884,0.425208599930087,0.838634582033504,0.44931452458598,0.150176892841506,0.64290234678832,0.285012743741249,0.79566670879636,1.46131323011707,0,0,0,0,0,0,0,0,0,0,0,0,0,0.526768169550154,0,0,0,0.167186495390678,0,0,0,0,0,0,0,0.128091319725675,0.130059347559878,0,0,0,0.14828656316206,0,0,0.226618685395132,0,0,0,0,0,0,0,0,0,0,0.821127996921047,0,0,0,0,0,0,0.361439152384566,0,0.144846518960824,0,0,0.189069634328136,0.443458794925128,0.175669571386252,0.0654895377488563,0,0,1.29818957461873,2.43781632218974,1.32957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0.25326102332916,0,0.286836620748814,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0.23486899728753,0.161872944368132,0.140450806702248,0.408308342509787,0.368502951935304,0.413303124703062,0,0,0,0,0.168336113954066,0.250237039743928,0,0,0,0,0,0,0,0.211931901159562,0.600182192168805,0.206105058476878,0,0.37223371266318,0,0.389748020644795,0,0,0,0,0.10075209822764,0,1.15956511897978,0,0.286804595389004,0,0,0.116193942869518,0,0,0,0,0.643240938192885,0,0,0,0.354920400119532,0.168584690078102,0.241011029883482,0.330881918197182,0,0.71181185733329,0.269662616320329,0.588664395376038,1.15424147083917,0,0,0,0,0,0,0,0,0,0.343135620597051,0.109750285408626,0,0.603173834469785,2.31471112896324,0,0,0,0.231860809950154,0.587043471179108,0,0,0,0,0,1.23108503043699,0,0.743155811443641,0,0.839910640994298,0.283550194484773,0.716468181622786,0.871901815541886,0,0,0.176096868026452,0,0,0,0.126995788584338,0,0,0,0.205654985406647,0,0,0.112131084345361,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0.904318131178758,0,0.099972991182057,0,1.50677127429638,2.10833939483032,0,0,0,0,0,0,0.112085143993527,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.415941723061614,0.178428988797162,0.630809660135739,0.468565659970853,0,0,0,0.664225598535437,0.184369168541703,0.0868836144680828,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0.160853921143607,0,0.154209693802656,0,0.574890092096664,0,0.348631135379878,0,0.200506470303285,0.920809889358963,0,0.182091168006717,0,0,0.539107359730903,0,0,0.422206515571503,0,0,0,0,0,0,0.254876273045038,0,0,0,0,2.82095137628028,0,0,0,0.0915694648183434,0,0,0,0,0,0.308097234229289,0.307007349452259,0,0.322260734604821,0.145016693914229,0.0852266274161009,0,0.165284915360978,0.192190067365106,0.255225424989168,0,0.464845549297286,0.62962469366128,0,0.308033580176089,0,0,0,0.143124886741991,0,0,0,0,0,0.318203247925937,0,0,0,0,0.202182481573316,0,0,0,0.243713489631284,0,0,0,0,0,0,0,0,0.655894752046633,0,0,0.281695602532241,0,0.0982490410131212,0,1.06428319221179,0,0,0,0,0.962221127255121,0,0,0,0,0,0.886860307073351,1.37834040124176,0,0.764637207142375,0,0.238231775457789,0,0,0,0,0.534120355637366,0,0.735120647943095,0,0,0,0,0,0.191505370132367,0.211673582723883,0.324621940274555,0.842391534340376,0.228234679033192,0.313359791546046,0,0.169291777801603,0.321176150207399,0,0,0,0,0.223676107892416,0,0,0,0,0.270455678475983,0,0,2.05854594449042,0.293016358543788,1.33496573924465,0.66866030566487,0,0,0.296964680832639,0.614321404198464,0,0,0.111308705022906,0.329607748453519,4.01138275443188,0,0,0,0,0.123084805461069,0,0.449341755736634,0,0,0,0,1.11136990144637,0,0,0,0,0.43729999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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=6418 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10760 | |||
|TSSclassifier=S | |||
|UniProt=Q5VXV2 | |||
|association_with_transcript=-1bp_to_ENST00000409104_5end | |||
|description=CAGE_peak_10_at_SET_5end | |||
|id=chr9:131447342..131447360,+ | |||
|ontology_enrichment_celltype=CL:0000066!1.83e-11!254;CL:0002076!4.91e-08!43;CL:0000063!9.09e-08!578;CL:0000223!2.58e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:0000990;9.69e-09;8!CL:0000235;8.00e-08;6!CL:0000840;8.00e-08;5!CL:0002573;3.20e-07;2!CL:0000451;3.67e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000990,7.14e-09,8;CL:0000840,7.66e-08,5;CL:0001029,7.66e-08,5;CL:0000235,7.84e-08,6;CL:0000451,2.87e-07,10;CL:0002573,6.59e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0050687!1.01e-17!143;DOID:305!1.51e-17!106;DOID:14566!1.08e-16!239;DOID:162!8.36e-16!235;DOID:299!1.31e-07!25;DOID:1749!1.83e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:1749;1.49e-08;14 | |||
|ontology_enrichment_disease_v019_2=DOID:0050687,4.20e-09,143;DOID:1749,1.26e-08,14;DOID:305,4.00e-07,106 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| |||
|short_description=p10@SET | |||
}} |
Revision as of 07:42, 14 September 2013
Short description: | p10@SET |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_10_at_SET_5end |
Coexpression cluster: | NA |
Association with transcript: | -1bp_to_ENST00000409104_5end |
EntrezGene: | SET |
HGNC: | 10760 |
UniProt: | Q5VXV2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
conventional dendritic cell | 7.14e-09 | 8 |
immature conventional dendritic cell | 7.66e-08 | 5 |
common dendritic progenitor | 7.66e-08 | 5 |
macrophage | 7.84e-08 | 6 |
dendritic cell | 2.87e-07 | 10 |
Schwann cell | 6.59e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
cell type cancer | 4.20e-09 | 143 |
squamous cell carcinoma | 1.26e-08 | 14 |
carcinoma | 4.00e-07 | 106 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.