FFCP PHASE1:Mm9::chr5:46247735..46247746,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=209707|HGNC=|UniProt=Q3U285|association_with_transcript=43bp_to_ENSMUST00000087164_5end|description=CAGE_peak_13_at_Lcorl_5end|id=chr5:46247735..46247746,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000192,4.56e-11,3;CL:0000359,4.56e-11,3;CL:0002539,4.56e-11,3;CL:0000514,4.56e-11,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0001135,4.56e-11,3;UBERON:0004237,4.56e-11,3;UBERON:0004695,4.56e-11,3;UBERON:0002111,4.56e-11,3;UBERON:0004178,4.56e-11,3;UBERON:0000947,1.23e-08,4;UBERON:0001637,1.23e-08,4;UBERON:0004573,1.23e-08,4;UBERON:0003509,1.23e-08,4;UBERON:0004571,1.23e-08,4;UBERON:0010191,1.23e-08,4;UBERON:0004572,1.23e-08,4;UBERON:0000055,3.64e-07,5;UBERON:0007500,3.64e-07,5;UBERON:0001981,3.64e-07,5;UBERON:0002049,3.64e-07,5;UBERON:0007798,3.64e-07,5;UBERON:0004537,3.64e-07,5;UBERON:0006965,3.64e-07,5|phase1_expression=0,0.348975407639361,0.909998478779072,0,0,0.16787927191189,0.233612640595526,0,0.140788722151667,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22940928106717,0,0,0,0.190023419456374,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485510353031154,0.377690453926732,0.506884656097573,3.85448179539531,0,0,0.219686182734472,0,0.139986421625363,0,0,0,0,0.257259436035947,0,0,0,0,0,0,0,0,0,0,0,0,0.622137673850866,0,0,0,0,0.122490799214954,0,0,0,0.127687338085188,0.307213066512487,0,0.0914876436024097,0,0,0,0,0,0.284743361598206,0.186399445825301,0.075726193333184,0.0755715601067855,0,0,0,0,0,0,0.140444420131752,0.170430322578058,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161766849947409,0.220841518460394,0,0,0,0,0,0.11981512450592,0,0,0,0,0.125654352112864,0,0.511430914660661,0,0,0,0.124406970610093,0,0,0,0.229902104433473,0,0.30140963567143,0.680364991513279,0.768682321709099,1.68663104207512,0.258703370739016,0,0,0,0,0,0,0.411564272815887,0,0,0,0.284163499395593,0,0,0,0,0,0.308534225774757,0.232533944750408,0,0,0.16455984991348,0,0.0810688095458557,0,0,0,0,0.102904612379284,0.991256348951394,0,0,0.232236671860439,0,0.201683524623343,0.22237804384487,0,0,0,0,0.198956472041151,0,0,0,0.199141273254367,0,0.114248512609729,0,0,0,0,0,0,0,0,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0.488894929326078,0.169745085775188,0.234690248288502,1.00503754465089,0.476087281772027,0.195133647857799,0.157635144106191,0.221464689648775,0.318909537314974,0,0,0,0,0,0,0.275936746304732,0,0.117211686592203,0.163934945376675,0,0.315508219416257,0.780877488593277,0.215423397732799,0,0.222798674082394,0,0,0.292255857911312,0,0,0.567760340833074,0,0.162886959353576,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0.129358683782755,0,0.354680467284547,0,0,0,0.469343416127421,0,0,0,0.322928853391811,0,0.119372344003136,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436725127492355,0.134864346384821,0,0.26175594198403,0.259229946583586,0,0,0,0,0.194451188344048,0,0,0.234714477291508,0,0,0.241584120826006,0,0,0,0,0.129920822977795,0,0,0,0,0.100966449948148,0,0,0,0,0.116876902181569,0,0,0,0,0,0.375364950902364,0,0,0,0,0.460325236507177,0,0.68741272937475,0,0,0,0,0,0,0.103787347584177,0,0.341467211508268,0.243106717068294,0,0,0,0,0.320919209591815,0,0,0.188626341386076,0.0936415074698824,0.128050304809739,0.17230640686684,0,0.115884325944855,0,0,0.147198920134397,0.342869252385415,0,0,0.290692833264657,0,0.169229215783353,0,0,0.271608227691724,0,0.118635018124174,0,0,0.309873682371932,0,0,0,0,0,0,0.231867835620421|short_description=p13@Lcorl}} | ||
|EntrezGene=209707 | |||
|HGNC= | |||
|UniProt=Q3U285 | |||
|association_with_transcript=43bp_to_ENSMUST00000087164_5end | |||
|description=CAGE_peak_13_at_Lcorl_5end | |||
|id=chr5:46247735..46247746,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000192,4.56e-11,3;CL:0000359,4.56e-11,3;CL:0002539,4.56e-11,3;CL:0000514,4.56e-11,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001135,4.56e-11,3;UBERON:0004237,4.56e-11,3;UBERON:0004695,4.56e-11,3;UBERON:0002111,4.56e-11,3;UBERON:0004178,4.56e-11,3;UBERON:0000947,1.23e-08,4;UBERON:0001637,1.23e-08,4;UBERON:0004573,1.23e-08,4;UBERON:0003509,1.23e-08,4;UBERON:0004571,1.23e-08,4;UBERON:0010191,1.23e-08,4;UBERON:0004572,1.23e-08,4;UBERON:0000055,3.64e-07,5;UBERON:0007500,3.64e-07,5;UBERON:0001981,3.64e-07,5;UBERON:0002049,3.64e-07,5;UBERON:0007798,3.64e-07,5;UBERON:0004537,3.64e-07,5;UBERON:0006965,3.64e-07,5 | |||
|phase1_expression=0,0.348975407639361,0.909998478779072,0,0,0.16787927191189,0.233612640595526,0,0.140788722151667,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22940928106717,0,0,0,0.190023419456374,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485510353031154,0.377690453926732,0.506884656097573,3.85448179539531,0,0,0.219686182734472,0,0.139986421625363,0,0,0,0,0.257259436035947,0,0,0,0,0,0,0,0,0,0,0,0,0.622137673850866,0,0,0,0,0.122490799214954,0,0,0,0.127687338085188,0.307213066512487,0,0.0914876436024097,0,0,0,0,0,0.284743361598206,0.186399445825301,0.075726193333184,0.0755715601067855,0,0,0,0,0,0,0.140444420131752,0.170430322578058,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161766849947409,0.220841518460394,0,0,0,0,0,0.11981512450592,0,0,0,0,0.125654352112864,0,0.511430914660661,0,0,0,0.124406970610093,0,0,0,0.229902104433473,0,0.30140963567143,0.680364991513279,0.768682321709099,1.68663104207512,0.258703370739016,0,0,0,0,0,0,0.411564272815887,0,0,0,0.284163499395593,0,0,0,0,0,0.308534225774757,0.232533944750408,0,0,0.16455984991348,0,0.0810688095458557,0,0,0,0,0.102904612379284,0.991256348951394,0,0,0.232236671860439,0,0.201683524623343,0.22237804384487,0,0,0,0,0.198956472041151,0,0,0,0.199141273254367,0,0.114248512609729,0,0,0,0,0,0,0,0,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0.488894929326078,0.169745085775188,0.234690248288502,1.00503754465089,0.476087281772027,0.195133647857799,0.157635144106191,0.221464689648775,0.318909537314974,0,0,0,0,0,0,0.275936746304732,0,0.117211686592203,0.163934945376675,0,0.315508219416257,0.780877488593277,0.215423397732799,0,0.222798674082394,0,0,0.292255857911312,0,0,0.567760340833074,0,0.162886959353576,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0.129358683782755,0,0.354680467284547,0,0,0,0.469343416127421,0,0,0,0.322928853391811,0,0.119372344003136,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436725127492355,0.134864346384821,0,0.26175594198403,0.259229946583586,0,0,0,0,0.194451188344048,0,0,0.234714477291508,0,0,0.241584120826006,0,0,0,0,0.129920822977795,0,0,0,0,0.100966449948148,0,0,0,0,0.116876902181569,0,0,0,0,0,0.375364950902364,0,0,0,0,0.460325236507177,0,0.68741272937475,0,0,0,0,0,0,0.103787347584177,0,0.341467211508268,0.243106717068294,0,0,0,0,0.320919209591815,0,0,0.188626341386076,0.0936415074698824,0.128050304809739,0.17230640686684,0,0.115884325944855,0,0,0.147198920134397,0.342869252385415,0,0,0.290692833264657,0,0.169229215783353,0,0,0.271608227691724,0,0.118635018124174,0,0,0.309873682371932,0,0,0,0,0,0,0.231867835620421 | |||
|short_description=p13@Lcorl | |||
}} |
Revision as of 07:41, 14 September 2013
Short description: | p13@Lcorl |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_13_at_Lcorl_5end |
Coexpression cluster: | NA |
Association with transcript: | 43bp_to_ENSMUST00000087164_5end |
EntrezGene: | Lcorl |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell | 4.56e-11 | 3 |
vascular associated smooth muscle cell | 4.56e-11 | 3 |
aortic smooth muscle cell | 4.56e-11 | 3 |
smooth muscle myoblast | 4.56e-11 | 3 |
Ontology term | p-value | n |
---|---|---|
smooth muscle tissue | 4.56e-11 | 3 |
blood vessel smooth muscle | 4.56e-11 | 3 |
arterial system smooth muscle | 4.56e-11 | 3 |
artery smooth muscle tissue | 4.56e-11 | 3 |
aorta smooth muscle tissue | 4.56e-11 | 3 |
aorta | 1.23e-08 | 4 |
artery | 1.23e-08 | 4 |
systemic artery | 1.23e-08 | 4 |
arterial blood vessel | 1.23e-08 | 4 |
systemic arterial system | 1.23e-08 | 4 |
aortic system | 1.23e-08 | 4 |
arterial system | 1.23e-08 | 4 |
vessel | 3.64e-07 | 5 |
epithelial tube open at both ends | 3.64e-07 | 5 |
blood vessel | 3.64e-07 | 5 |
vasculature | 3.64e-07 | 5 |
vascular system | 3.64e-07 | 5 |
blood vasculature | 3.64e-07 | 5 |
vascular cord | 3.64e-07 | 5 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.