FFCP PHASE1:Mm9::chr5:29895978..29895988,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=100763|HGNC=|MCL_coexpression_id=60|UniProt=Q80U95|association_with_transcript=196bp_to_ENSMUST00000049453,NM_133907,uc008wul.1,uc008wum.1,uc008wun.1_5end|description=CAGE_peak_6_at_Ube3c_5end|id=chr5:29895978..29895988,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002610,3.73e-07,3;CL:0000117,9.50e-07,23;CL:0000337,9.50e-07,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!1.97e-10!75;UBERON:0001016!1.97e-10!75;UBERON:0000025!3.63e-10!114;UBERON:0004111!4.71e-10!122;UBERON:0001017!7.33e-10!73;UBERON:0005743!7.33e-10!73;UBERON:0001049!1.76e-09!52;UBERON:0005068!1.76e-09!52;UBERON:0006241!1.76e-09!52;UBERON:0007135!1.76e-09!52;UBERON:0000955!4.97e-09!50;UBERON:0006238!4.97e-09!50;UBERON:0002616!1.67e-08!49;UBERON:0004121!7.35e-08!102;UBERON:0000924!7.35e-08!102;UBERON:0006601!7.35e-08!102;UBERON:0000033!2.42e-07!63;UBERON:0002346!2.59e-07!71;UBERON:0003075!2.59e-07!71;UBERON:0007284!2.59e-07!71;UBERON:0002020!2.86e-07!34|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.72e-17,54;UBERON:0001049,1.13e-14,52;UBERON:0005068,1.13e-14,52;UBERON:0006241,1.13e-14,52;UBERON:0007135,1.13e-14,52;UBERON:0001017,1.23e-13,73;UBERON:0001016,4.35e-13,75;UBERON:0002020,5.20e-13,34;UBERON:0002346,6.98e-12,64;UBERON:0003075,6.98e-12,64;UBERON:0007284,6.98e-12,64;UBERON:0000955,8.30e-11,47;UBERON:0006238,8.30e-11,47;UBERON:0004121,1.00e-09,95;UBERON:0000924,1.00e-09,95;UBERON:0006601,1.00e-09,95;UBERON:0002616,1.07e-09,46;UBERON:0010371,1.11e-09,73;UBERON:0002021,2.21e-09,10;UBERON:0000411,2.21e-09,10;UBERON:0001950,2.21e-09,10;UBERON:0003080,5.54e-09,40;UBERON:0003528,8.26e-09,29;UBERON:0002791,8.26e-09,29;UBERON:0001893,8.26e-09,29;UBERON:0010314,9.16e-09,92;UBERON:0002240,3.53e-08,6;UBERON:0005174,3.53e-08,6;UBERON:0001137,3.53e-08,6;UBERON:0002780,3.93e-08,39;UBERON:0001890,3.93e-08,39;UBERON:0006240,3.93e-08,39;UBERON:0000025,5.11e-08,114;UBERON:0003056,1.51e-07,49;UBERON:0003076,3.06e-07,12;UBERON:0003057,3.06e-07,12;UBERON:0004684,3.73e-07,3;UBERON:0002275,3.73e-07,3;UBERON:0004111,4.91e-07,122|phase1_expression=0.640595388419176,0,0,0,0,0.503637815735669,0.934450562382103,0.387369970324729,0.140788722151667,0,0.34243593645101,0.957265907944037,0,0.174840804837995,0,0.607425802169478,0,0,0.137114433605739,0,2.29616883407888,0.0992909512008853,0,0.159992422793407,0,0,0.430761996159075,0.215471232685889,0.380046838912748,0.252030129759931,0.221730510655305,0,0,0,0.577703239502549,0.332469290716985,0,0,0,0.523523743973798,0,0,0,0.503587271902309,0.506884656097573,0.183546752161682,0,0.65407546914134,0.659058548203415,0.194429899074283,0,0,0.167782606057736,0,0,0.771778308107841,1.14613375975503,0,0.606949382578793,0.528990979272033,0.633831403506179,0,0,0,0,0.7104801149461,0.898800331555214,0,0.207379224616955,0.270011876663381,0,0.571301968807607,1.76694832761291,0.244981598429908,0.575072826109418,0,2.20231761998777,3.83062014255563,2.15049146558741,0.527545150920775,1.37231465403614,0,1.95428099300967,0.56276261003168,1.37518422999129,1.76777151284201,2.98980529678116,1.4911955666024,0.757261933331841,0.755715601067855,0.289864488701678,0,0,1.07940638327563,0,0.448026887097336,0.561777680527007,0.852151612890289,0,0.70667914902068,0.704217098883403,0,2.54805239706646,0,0.432982082022428,0.506719730950197,0.505524445014783,0.79928715803342,0,0.29688427812965,0.346970653532272,0.304465478312141,0.691846491768175,0.452167921657868,0.823120949949934,0.376999773989026,0.741584903203122,0.289198713839823,0,0.647067399789637,0.220841518460394,0.969750506270444,0,0.292780797011547,0.628340120440365,0.255457055208591,0.239630249011841,0,0.254140454146129,1.19832511523858,0.915001205637253,1.50785222535437,2.08589184230732,2.55715457330331,2.90903262383384,1.62241263067758,0.305518091550949,0.870848794270651,0.758168275301024,1.05220927943237,0.130120442962704,0,0.180062129805349,0.30140963567143,0.476255494059295,0.384341160854549,0.187403449119458,0.258703370739016,0.215567992932842,0.378212160335639,0.175951124163949,0,0,0.348252166522167,0,0.199034266818493,0,0,0,0.621377317606506,0.234526059981096,0,0.710234206755631,0,0.771335564436891,0.465067889500816,1.07309360559848,0.350296027101508,0.822799249567402,0.656669856316381,1.13496333364198,0.292399974850665,0.658650345873152,0.805238512562231,2.3131894342054,0.514523061896422,0,0.264450566663544,0.213288250535234,0,0.515469845288373,0.201683524623343,0.22237804384487,0.190225626112559,0.949058123089023,0.494096864172033,0.502670417600539,0.596869416123452,0.38992817423824,0,0.432276099749388,0.199141273254367,0.189667900953082,0.342745537829186,1.1270773567308,0.203651327845314,0.193952487167626,0.701358198903186,0.442655759869801,0.295220295959204,0.156998727841375,0.493588655687202,0.296452627087149,0.667380422864376,0.196558995113203,0,0.608580364165509,0,0.50925170356284,0.287696137450811,0.486405680325106,0.823684239564244,1.43768206527355,0.372140947668503,0.624075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| ||
|EntrezGene=100763 | |||
|HGNC= | |||
|MCL_coexpression_id=60 | |||
|UniProt=Q80U95 | |||
|association_with_transcript=196bp_to_ENSMUST00000049453,NM_133907,uc008wul.1,uc008wum.1,uc008wun.1_5end | |||
|description=CAGE_peak_6_at_Ube3c_5end | |||
|id=chr5:29895978..29895988,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002610,3.73e-07,3;CL:0000117,9.50e-07,23;CL:0000337,9.50e-07,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.97e-10!75;UBERON:0001016!1.97e-10!75;UBERON:0000025!3.63e-10!114;UBERON:0004111!4.71e-10!122;UBERON:0001017!7.33e-10!73;UBERON:0005743!7.33e-10!73;UBERON:0001049!1.76e-09!52;UBERON:0005068!1.76e-09!52;UBERON:0006241!1.76e-09!52;UBERON:0007135!1.76e-09!52;UBERON:0000955!4.97e-09!50;UBERON:0006238!4.97e-09!50;UBERON:0002616!1.67e-08!49;UBERON:0004121!7.35e-08!102;UBERON:0000924!7.35e-08!102;UBERON:0006601!7.35e-08!102;UBERON:0000033!2.42e-07!63;UBERON:0002346!2.59e-07!71;UBERON:0003075!2.59e-07!71;UBERON:0007284!2.59e-07!71;UBERON:0002020!2.86e-07!34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.72e-17,54;UBERON:0001049,1.13e-14,52;UBERON:0005068,1.13e-14,52;UBERON:0006241,1.13e-14,52;UBERON:0007135,1.13e-14,52;UBERON:0001017,1.23e-13,73;UBERON:0001016,4.35e-13,75;UBERON:0002020,5.20e-13,34;UBERON:0002346,6.98e-12,64;UBERON:0003075,6.98e-12,64;UBERON:0007284,6.98e-12,64;UBERON:0000955,8.30e-11,47;UBERON:0006238,8.30e-11,47;UBERON:0004121,1.00e-09,95;UBERON:0000924,1.00e-09,95;UBERON:0006601,1.00e-09,95;UBERON:0002616,1.07e-09,46;UBERON:0010371,1.11e-09,73;UBERON:0002021,2.21e-09,10;UBERON:0000411,2.21e-09,10;UBERON:0001950,2.21e-09,10;UBERON:0003080,5.54e-09,40;UBERON:0003528,8.26e-09,29;UBERON:0002791,8.26e-09,29;UBERON:0001893,8.26e-09,29;UBERON:0010314,9.16e-09,92;UBERON:0002240,3.53e-08,6;UBERON:0005174,3.53e-08,6;UBERON:0001137,3.53e-08,6;UBERON:0002780,3.93e-08,39;UBERON:0001890,3.93e-08,39;UBERON:0006240,3.93e-08,39;UBERON:0000025,5.11e-08,114;UBERON:0003056,1.51e-07,49;UBERON:0003076,3.06e-07,12;UBERON:0003057,3.06e-07,12;UBERON:0004684,3.73e-07,3;UBERON:0002275,3.73e-07,3;UBERON:0004111,4.91e-07,122 | |||
|phase1_expression=0.640595388419176,0,0,0,0,0.503637815735669,0.934450562382103,0.387369970324729,0.140788722151667,0,0.34243593645101,0.957265907944037,0,0.174840804837995,0,0.607425802169478,0,0,0.137114433605739,0,2.29616883407888,0.0992909512008853,0,0.159992422793407,0,0,0.430761996159075,0.215471232685889,0.380046838912748,0.252030129759931,0.221730510655305,0,0,0,0.577703239502549,0.332469290716985,0,0,0,0.523523743973798,0,0,0,0.503587271902309,0.506884656097573,0.183546752161682,0,0.65407546914134,0.659058548203415,0.194429899074283,0,0,0.167782606057736,0,0,0.771778308107841,1.14613375975503,0,0.606949382578793,0.528990979272033,0.633831403506179,0,0,0,0,0.7104801149461,0.898800331555214,0,0.207379224616955,0.270011876663381,0,0.571301968807607,1.76694832761291,0.244981598429908,0.575072826109418,0,2.20231761998777,3.83062014255563,2.15049146558741,0.527545150920775,1.37231465403614,0,1.95428099300967,0.56276261003168,1.37518422999129,1.76777151284201,2.98980529678116,1.4911955666024,0.757261933331841,0.755715601067855,0.289864488701678,0,0,1.07940638327563,0,0.448026887097336,0.561777680527007,0.852151612890289,0,0.70667914902068,0.704217098883403,0,2.54805239706646,0,0.432982082022428,0.506719730950197,0.505524445014783,0.79928715803342,0,0.29688427812965,0.346970653532272,0.304465478312141,0.691846491768175,0.452167921657868,0.823120949949934,0.376999773989026,0.741584903203122,0.289198713839823,0,0.647067399789637,0.220841518460394,0.969750506270444,0,0.292780797011547,0.628340120440365,0.255457055208591,0.239630249011841,0,0.254140454146129,1.19832511523858,0.915001205637253,1.50785222535437,2.08589184230732,2.55715457330331,2.90903262383384,1.62241263067758,0.305518091550949,0.870848794270651,0.758168275301024,1.05220927943237,0.130120442962704,0,0.180062129805349,0.30140963567143,0.476255494059295,0.384341160854549,0.187403449119458,0.258703370739016,0.215567992932842,0.378212160335639,0.175951124163949,0,0,0.348252166522167,0,0.199034266818493,0,0,0,0.621377317606506,0.234526059981096,0,0.710234206755631,0,0.771335564436891,0.465067889500816,1.07309360559848,0.350296027101508,0.822799249567402,0.656669856316381,1.13496333364198,0.292399974850665,0.658650345873152,0.805238512562231,2.3131894342054,0.514523061896422,0,0.264450566663544,0.213288250535234,0,0.515469845288373,0.201683524623343,0.22237804384487,0.190225626112559,0.949058123089023,0.494096864172033,0.502670417600539,0.596869416123452,0.38992817423824,0,0.432276099749388,0.199141273254367,0.189667900953082,0.342745537829186,1.1270773567308,0.203651327845314,0.193952487167626,0.701358198903186,0.442655759869801,0.295220295959204,0.156998727841375,0.493588655687202,0.296452627087149,0.667380422864376,0.196558995113203,0,0.608580364165509,0,0.50925170356284,0.287696137450811,0.486405680325106,0.823684239564244,1.43768206527355,0.372140947668503,0.624075346229121,1.51547326768267,0.538192240565737,0.482443521363367,0.369506380333209,0.757965647081939,0.651859905768103,0.509235257325564,0.234690248288502,0,0.714130922658041,0.585400943573396,0.315270288212382,1.55025282754142,0.797273843287435,0,0.690739927463582,0.433947175744535,0,0,0,0,1.60550589987792,2.10981035865966,0.491804836130026,0.504941854408746,0.315508219416257,0,0.646270193198397,0.477937595905104,0.668396022247182,0.283076530788832,0.404810701674894,0.292255857911312,0.395287777946524,3.21321316421807,0.283880170416537,0,0.162886959353576,0.329940245945071,0,0.728341908464944,0.302323556964751,0.188605079755898,0,0,0.516856586336442,0.727067458955011,0,0,0,0,0.680879211507576,0,0.517434735131018,0.857348140126369,0.354680467284547,0.535106452806212,0.329098041204242,0.608929898229199,0.938686832254841,0.42366414172764,0,0.16488625294148,0.322928853391811,0.422190474497091,0.477489376012546,0.164140899745061,0.291480836629851,1.66882771809459,0,0.412773735926445,0.185194527369712,0.188368457004691,0.27338845544205,0.228778173206523,0.169978429993855,0.139951452323658,0.414599921413271,0,0,0,0.432021363287205,0.418176592028937,0.436725127492355,0.269728692769641,0.826534557253359,0,0.648074866458964,0,13.5286305284206,0.299033092087958,0.496375471371293,0.194451188344048,0,0,0.234714477291508,0.5208175393758,0.629156066554265,2.41584120826006,5.76060012515731,0.316011120628178,0.405450430580328,0.205421914329655,0.25984164595559,0.179026695667481,0.198681354781265,0.240390899039938,0.147689527174577,0.302899349844443,0.381034033274999,0,0.194915761479505,0,0,0.680191150845634,1.10992976687032,0.897138566094757,0.671538465456314,0.386379188064381,0.563047426353546,0.183151624267265,0.428736758158132,0.501572104035363,3.95326289831947,0.920650473014354,0.572895513439397,2.40594455281163,4.11049511862385,1.5107877947794,2.02506750069542,1.80128481289688,0.453142408984205,1.55328093525546,0.31136204275253,0.399024873401031,0.170733605754134,1.21553358534147,0.838452650511929,0.367687016900028,0.44449345560323,0,0.320919209591815,1.26348605881899,0.50695859978048,1.5090107310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| |||
|short_description=p6@Ube3c | |||
}} | |||
Revision as of 07:21, 14 September 2013
| Short description: | p6@Ube3c |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_6_at_Ube3c_5end |
| Coexpression cluster: | MCL_coexpression_mm9:60 |
| Association with transcript: | 196bp_to_ENSMUST00000049453, NM_133907, uc008wul.1, uc008wum.1, uc008wun.1_5end |
| EntrezGene: | Ube3c |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| raphe nuclei neuron | 3.73e-07 | 3 |
| CNS neuron (sensu Vertebrata) | 9.50e-07 | 23 |
| neuroblast (sensu Vertebrata) | 9.50e-07 | 23 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
