FFCP PHASE1:Mm9::chr5:27487166..27487179,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=234|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr5:27487166..27487179,+|id=chr5:27487166..27487179,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002614,3.46e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002298!2.02e-08!6|ontology_enrichment_uberon_v019_2=UBERON:0002950,5.18e-09,4;UBERON:0001891,5.18e-09,4;UBERON:0009616,5.18e-09,4;UBERON:0010286,5.18e-09,4;UBERON:0002038,3.46e-07,3;UBERON:0009663,3.46e-07,3;UBERON:0009661,3.46e-07,3;UBERON:0000125,3.46e-07,3;UBERON:0002308,3.46e-07,3|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606949382578793,0.528990979272033,1.26766280701236,0,0,0,0,0,0,0,0,0,0,0.285650984403804,0,0,0,0,0,1.27687338085188,1.22885226604995,0.263772575460388,0.182975287204819,0.52091337055676,2.51264699101243,11.2552522006336,7.02871939773326,0,0.142371680799103,5.21918448310842,1.06016670666458,2.49386148352392,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.99581278809645,0,0,0,0,2.70124457927428,1.29793010454206,0.203678727700633,0,0,1.05220927943237,0.130120442962704,0,0,0.30140963567143,0.136072998302656,0.384341160854549,0.374806898238915,5.43277078551933,0,0.567318240503458,0.175951124163949,0.43839146485515,0.278047249225598,0,0,0.398068533636986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.40825884981688,2.46144541843627,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325773918707152,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.428674070063185,1.24138163549592,2.67553226403106,4.77192159746151,1.8267896946876,0,0,0.441056796109924,0,0,0,0,0,0,0.927126510052548,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13020438484395,0,0,0,0,0,0,0,0,0,0.360586348559907,0,0,0.0762068066549998,0,0.292373642219257,0.288635524920988,0.584384510907845,0,0,0,0,0.386379188064381,0,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0.682934423016537,1.21553358534147,1.46729213839588,0.367687016900028,1.55572709461131,2.26638562962784,4.1719497246936,2.02157769411038,2.02783439912192,1.50901073108861,2.06011316433741,1.79270426733634,1.55075766180156,1.90517476513229,0.695305955669133,1.54327376370964,0.824171801606613,1.47198920134397,2.40008476669791,2.12970967391205,1.66905332963125,1.88950341622027,2.1645157495526,2.11536519729191,1.82927972872773,2.36762740294059,2.30866993537965,0.561142271657738,1.89816028998679,1.37906275325789,2.45538625901814,1.23949472948773,1.54325288784913,0.999242311751784,0.701794825336225,1.28922632428979,2.67803664896381,1.76473135295612,2.78241402744506|short_description=p@chr5:27487166..27487179,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=234 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr5:27487166..27487179,+ | |||
|id=chr5:27487166..27487179,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002614,3.46e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002298!2.02e-08!6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002950,5.18e-09,4;UBERON:0001891,5.18e-09,4;UBERON:0009616,5.18e-09,4;UBERON:0010286,5.18e-09,4;UBERON:0002038,3.46e-07,3;UBERON:0009663,3.46e-07,3;UBERON:0009661,3.46e-07,3;UBERON:0000125,3.46e-07,3;UBERON:0002308,3.46e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606949382578793,0.528990979272033,1.26766280701236,0,0,0,0,0,0,0,0,0,0,0.285650984403804,0,0,0,0,0,1.27687338085188,1.22885226604995,0.263772575460388,0.182975287204819,0.52091337055676,2.51264699101243,11.2552522006336,7.02871939773326,0,0.142371680799103,5.21918448310842,1.06016670666458,2.49386148352392,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.99581278809645,0,0,0,0,2.70124457927428,1.29793010454206,0.203678727700633,0,0,1.05220927943237,0.130120442962704,0,0,0.30140963567143,0.136072998302656,0.384341160854549,0.374806898238915,5.43277078551933,0,0.567318240503458,0.175951124163949,0.43839146485515,0.278047249225598,0,0,0.398068533636986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.40825884981688,2.46144541843627,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325773918707152,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.428674070063185,1.24138163549592,2.67553226403106,4.77192159746151,1.8267896946876,0,0,0.441056796109924,0,0,0,0,0,0,0.927126510052548,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13020438484395,0,0,0,0,0,0,0,0,0,0.360586348559907,0,0,0.0762068066549998,0,0.292373642219257,0.288635524920988,0.584384510907845,0,0,0,0,0.386379188064381,0,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0.682934423016537,1.21553358534147,1.46729213839588,0.367687016900028,1.55572709461131,2.26638562962784,4.1719497246936,2.02157769411038,2.02783439912192,1.50901073108861,2.06011316433741,1.79270426733634,1.55075766180156,1.90517476513229,0.695305955669133,1.54327376370964,0.824171801606613,1.47198920134397,2.40008476669791,2.12970967391205,1.66905332963125,1.88950341622027,2.1645157495526,2.11536519729191,1.82927972872773,2.36762740294059,2.30866993537965,0.561142271657738,1.89816028998679,1.37906275325789,2.45538625901814,1.23949472948773,1.54325288784913,0.999242311751784,0.701794825336225,1.28922632428979,2.67803664896381,1.76473135295612,2.78241402744506 | |||
|short_description=p@chr5:27487166..27487179,+ | |||
}} |
Revision as of 07:20, 14 September 2013
Short description: | p@chr5:27487166..27487179, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr5:27487166..27487179, + |
Coexpression cluster: | MCL_coexpression_mm9:234 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron of the substantia nigra | 3.46e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
regional part of midbrain | 5.18e-09 | 4 |
midbrain | 5.18e-09 | 4 |
presumptive midbrain | 5.18e-09 | 4 |
midbrain neural tube | 5.18e-09 | 4 |
substantia nigra | 3.46e-07 | 3 |
telencephalic nucleus | 3.46e-07 | 3 |
midbrain nucleus | 3.46e-07 | 3 |
neural nucleus | 3.46e-07 | 3 |
nucleus of brain | 3.46e-07 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.