FFCP PHASE1:Mm9::chr5:24606870..24606882,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=108099|HGNC=|MCL_coexpression_id=99|UniProt=Q91WG5,Q3U4D5|association_with_transcript=-410bp_to_ENSMUST00000030784,NM_145401,uc008wsm.2_5end|description=CAGE_peak_25_at_Prkag2_5end|id=chr5:24606870..24606882,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000182,1.16e-40,5;CL:0000223,1.32e-10,20;CL:0000066,1.43e-08,25|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.17e-14,22;UBERON:0007499,1.17e-14,22;UBERON:0006925,1.17e-14,22;UBERON:0009497,1.17e-14,22;UBERON:0000015,1.17e-14,22;UBERON:0002423,1.17e-14,22;UBERON:0006235,1.17e-14,22;UBERON:0008835,1.17e-14,22;UBERON:0003894,1.17e-14,22;UBERON:0004161,1.17e-14,22;UBERON:0008836,1.17e-14,22;UBERON:0009854,4.90e-14,23;UBERON:0009856,4.90e-14,23;UBERON:0002365,6.09e-13,25;UBERON:0002330,6.09e-13,25;UBERON:0005172,2.00e-09,49;UBERON:0005173,2.00e-09,49;UBERON:0002417,2.00e-09,49;UBERON:0000916,2.00e-09,49;UBERON:0003104,1.35e-07,61;UBERON:0009142,1.35e-07,61;UBERON:0001987,2.03e-07,2;UBERON:0003124,2.03e-07,2;UBERON:0004340,2.03e-07,2;UBERON:0005256,2.61e-07,45;UBERON:0009569,5.00e-07,66;UBERON:0003914,5.25e-07,47|phase1_expression=0,0,0,0,0,0,0,0.129123323441576,0.140788722151667,0.70219357896598,0.171217968225505,0.0797721589953364,0,0,0,0,0,0,0.137114433605739,0,0.255129870453209,0.198581902401771,0,0,0,0,0,0.215471232685889,0,0,0,0,0,0,0.288851619751275,0,0,0,0.7813353445238,0,0,0,0,0.125896817975577,0.101376931219515,0.183546752161682,0,0.218025156380447,0.219686182734472,0.194429899074283,0.279972843250725,0,0,0,0,0,0.286533439938757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255374676170375,0.153606533256243,0,0,0,0.279182999001381,0,0.30559649555362,0.294628585473668,0.142371680799103,0,0,0,0.289864488701678,0.860423876981386,48.2779646932503,3.2382191498269,1.94932925234301,1.34408066129201,0.280888840263504,0,0,0,0,0,0,0,0,0.253359865475099,0.505524445014783,0.79928715803342,0.776813650941515,0,0.173485326766136,0,0,0.150722640552623,0.23517741427141,0,0.247194967734374,0.289198713839823,0,0,0.220841518460394,0.484875253135222,0,0.292780797011547,0.83778682725382,0,0,0,0.381210681219194,0.299581278809645,0,0,0.347648640384553,0.255715457330331,0,0,0.101839363850316,0.622034853050465,0,0.210441855886474,0,0,0.180062129805349,0.452114453507145,0.136072998302656,0.12811372028485,0.0937017245597288,0.776110112217047,0,0,0,0.219195732427575,0,0.348252166522167,0.205782136407943,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0.16455984991348,0,0.243206428637567,0,0.219550115291051,0,0.841159794256509,0.102904612379284,0,0,0,0,0,0,0.22237804384487,0,0.474529061544512,0.164698954724011,0.251335208800269,0,0.38992817423824,0.898819408654221,0.216138049874694,0,0,0.114248512609729,1.1270773567308,0,0.387904974335251,0.280543279561274,0.252946148497029,0.590440591918409,0.627994911365499,0.370191491765402,0.592905254174298,0,0,0.224862112384854,0,0,0,0.575392274901621,0.648540907100142,0.549122826376163,0,1.86070473834252,0.312037673114561,0.252578877947112,0.538192240565737,0.482443521363367,0.184753190166605,0.189491411770485,0,0,0,0.167506257441816,0.238043640886014,0.195133647857799,0,0.221464689648775,0.159454768657487,0.327726629431476,0.172684981865896,0,0,0,0,0,0.160550589987792,0.117211686592203,0,0,0.315508219416257,0,0,0,0.445597348164788,0,0,0,0.395287777946524,0.642642632843614,0.425820255624806,0,0.488660878060728,0.494910368917606,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0,0,0,0.177340233642274,0.178368817602071,0,0.304464949114599,1.17335854031855,0.63549621259146,0.441056796109924,0,0.484393280087717,0.0603129249281559,0.119372344003136,0,0,0.370850604021019,0,0,0,0,0,0,0.339956859987711,0.139951452323658,0,0,0,0,0.216010681643603,0.209088296014469,0.218362563746178,0.269728692769641,0.165306911450672,0,0,0,0,0,0,0.194451188344048,0,0,0.234714477291508,0,0,0.241584120826006,0,0,0,0,0,0,0,0.120195449519969,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0.386379188064381,0.93841237725591,0.549454872801795,0.214368379079066,0,0,0,0,0.343706364687375,0,0,0,0.45032120322422,0,0,0,0,0,0,0.209613162627982,0,0.222246727801615,0.206035057238894,0,0.252697211763798,0,0.188626341386076,0.187283014939765,0.128050304809739,0.17230640686684,0.476293691283074,0.115884325944855,0,0,0.294397840268795,0.342869252385415,0.177475806159338,0.238436189947321,0.290692833264657,0.188218760830661,0.169229215783353,0,0,0.135804113845862,0,0.118635018124174,0,0,0,0,0.499621155875892,0,0,0.382576664137687,0.220591419119515,0.231867835620421|short_description=p25@Prkag2}} | ||
|EntrezGene=108099 | |||
|HGNC= | |||
|MCL_coexpression_id=99 | |||
|UniProt=Q91WG5,Q3U4D5 | |||
|association_with_transcript=-410bp_to_ENSMUST00000030784,NM_145401,uc008wsm.2_5end | |||
|description=CAGE_peak_25_at_Prkag2_5end | |||
|id=chr5:24606870..24606882,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.16e-40,5;CL:0000223,1.32e-10,20;CL:0000066,1.43e-08,25 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.17e-14,22;UBERON:0007499,1.17e-14,22;UBERON:0006925,1.17e-14,22;UBERON:0009497,1.17e-14,22;UBERON:0000015,1.17e-14,22;UBERON:0002423,1.17e-14,22;UBERON:0006235,1.17e-14,22;UBERON:0008835,1.17e-14,22;UBERON:0003894,1.17e-14,22;UBERON:0004161,1.17e-14,22;UBERON:0008836,1.17e-14,22;UBERON:0009854,4.90e-14,23;UBERON:0009856,4.90e-14,23;UBERON:0002365,6.09e-13,25;UBERON:0002330,6.09e-13,25;UBERON:0005172,2.00e-09,49;UBERON:0005173,2.00e-09,49;UBERON:0002417,2.00e-09,49;UBERON:0000916,2.00e-09,49;UBERON:0003104,1.35e-07,61;UBERON:0009142,1.35e-07,61;UBERON:0001987,2.03e-07,2;UBERON:0003124,2.03e-07,2;UBERON:0004340,2.03e-07,2;UBERON:0005256,2.61e-07,45;UBERON:0009569,5.00e-07,66;UBERON:0003914,5.25e-07,47 | |||
|phase1_expression=0,0,0,0,0,0,0,0.129123323441576,0.140788722151667,0.70219357896598,0.171217968225505,0.0797721589953364,0,0,0,0,0,0,0.137114433605739,0,0.255129870453209,0.198581902401771,0,0,0,0,0,0.215471232685889,0,0,0,0,0,0,0.288851619751275,0,0,0,0.7813353445238,0,0,0,0,0.125896817975577,0.101376931219515,0.183546752161682,0,0.218025156380447,0.219686182734472,0.194429899074283,0.279972843250725,0,0,0,0,0,0.286533439938757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255374676170375,0.153606533256243,0,0,0,0.279182999001381,0,0.30559649555362,0.294628585473668,0.142371680799103,0,0,0,0.289864488701678,0.860423876981386,48.2779646932503,3.2382191498269,1.94932925234301,1.34408066129201,0.280888840263504,0,0,0,0,0,0,0,0,0.253359865475099,0.505524445014783,0.79928715803342,0.776813650941515,0,0.173485326766136,0,0,0.150722640552623,0.23517741427141,0,0.247194967734374,0.289198713839823,0,0,0.220841518460394,0.484875253135222,0,0.292780797011547,0.83778682725382,0,0,0,0.381210681219194,0.299581278809645,0,0,0.347648640384553,0.255715457330331,0,0,0.101839363850316,0.622034853050465,0,0.210441855886474,0,0,0.180062129805349,0.452114453507145,0.136072998302656,0.12811372028485,0.0937017245597288,0.776110112217047,0,0,0,0.219195732427575,0,0.348252166522167,0.205782136407943,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0.16455984991348,0,0.243206428637567,0,0.219550115291051,0,0.841159794256509,0.102904612379284,0,0,0,0,0,0,0.22237804384487,0,0.474529061544512,0.164698954724011,0.251335208800269,0,0.38992817423824,0.898819408654221,0.216138049874694,0,0,0.114248512609729,1.1270773567308,0,0.387904974335251,0.280543279561274,0.252946148497029,0.590440591918409,0.627994911365499,0.370191491765402,0.592905254174298,0,0,0.224862112384854,0,0,0,0.575392274901621,0.648540907100142,0.549122826376163,0,1.86070473834252,0.312037673114561,0.252578877947112,0.538192240565737,0.482443521363367,0.184753190166605,0.189491411770485,0,0,0,0.167506257441816,0.238043640886014,0.195133647857799,0,0.221464689648775,0.159454768657487,0.327726629431476,0.172684981865896,0,0,0,0,0,0.160550589987792,0.117211686592203,0,0,0.315508219416257,0,0,0,0.445597348164788,0,0,0,0.395287777946524,0.642642632843614,0.425820255624806,0,0.488660878060728,0.494910368917606,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0,0,0,0.177340233642274,0.178368817602071,0,0.304464949114599,1.17335854031855,0.63549621259146,0.441056796109924,0,0.484393280087717,0.0603129249281559,0.119372344003136,0,0,0.370850604021019,0,0,0,0,0,0,0.339956859987711,0.139951452323658,0,0,0,0,0.216010681643603,0.209088296014469,0.218362563746178,0.269728692769641,0.165306911450672,0,0,0,0,0,0,0.194451188344048,0,0,0.234714477291508,0,0,0.241584120826006,0,0,0,0,0,0,0,0.120195449519969,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0.386379188064381,0.93841237725591,0.549454872801795,0.214368379079066,0,0,0,0,0.343706364687375,0,0,0,0.45032120322422,0,0,0,0,0,0,0.209613162627982,0,0.222246727801615,0.206035057238894,0,0.252697211763798,0,0.188626341386076,0.187283014939765,0.128050304809739,0.17230640686684,0.476293691283074,0.115884325944855,0,0,0.294397840268795,0.342869252385415,0.177475806159338,0.238436189947321,0.290692833264657,0.188218760830661,0.169229215783353,0,0,0.135804113845862,0,0.118635018124174,0,0,0,0,0.499621155875892,0,0,0.382576664137687,0.220591419119515,0.231867835620421 | |||
|short_description=p25@Prkag2 | |||
}} |
Revision as of 07:18, 14 September 2013
Short description: | p25@Prkag2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_25_at_Prkag2_5end |
Coexpression cluster: | MCL_coexpression_mm9:99 |
Association with transcript: | -410bp_to_ENSMUST00000030784, NM_145401, uc008wsm.2_5end |
EntrezGene: | Prkag2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.16e-40 | 5 |
endodermal cell | 1.32e-10 | 20 |
epithelial cell | 1.43e-08 | 25 |
Ontology term | p-value | n |
---|---|---|
liver | 1.17e-14 | 22 |
epithelial sac | 1.17e-14 | 22 |
digestive gland | 1.17e-14 | 22 |
epithelium of foregut-midgut junction | 1.17e-14 | 22 |
anatomical boundary | 1.17e-14 | 22 |
hepatobiliary system | 1.17e-14 | 22 |
foregut-midgut junction | 1.17e-14 | 22 |
hepatic diverticulum | 1.17e-14 | 22 |
liver primordium | 1.17e-14 | 22 |
septum transversum | 1.17e-14 | 22 |
liver bud | 1.17e-14 | 22 |
digestive tract diverticulum | 4.90e-14 | 23 |
sac | 4.90e-14 | 23 |
exocrine gland | 6.09e-13 | 25 |
exocrine system | 6.09e-13 | 25 |
abdomen element | 2.00e-09 | 49 |
abdominal segment element | 2.00e-09 | 49 |
abdominal segment of trunk | 2.00e-09 | 49 |
abdomen | 2.00e-09 | 49 |
mesenchyme | 1.35e-07 | 61 |
entire embryonic mesenchyme | 1.35e-07 | 61 |
placenta | 2.03e-07 | 2 |
chorion | 2.03e-07 | 2 |
allantois | 2.03e-07 | 2 |
trunk mesenchyme | 2.61e-07 | 45 |
subdivision of trunk | 5.00e-07 | 66 |
epithelial tube | 5.25e-07 | 47 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.