FFCP PHASE1:Mm9::chr5:22892703..22892742,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=421|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr5:22892703..22892742,-|id=chr5:22892703..22892742,-|ontology_enrichment_celltype=CL:0002320!3.36e-14!46;CL:0000134!3.36e-14!46;CL:0000988!5.74e-14!32;CL:0002032!5.74e-14!32;CL:0000037!5.74e-14!32;CL:0000566!5.74e-14!32;CL:0000837!5.74e-14!32;CL:0000219!3.95e-13!54;CL:0000838!3.45e-10!12;CL:0000063!4.30e-10!66;CL:0000542!3.36e-09!13;CL:0000051!3.36e-09!13;CL:0000084!4.15e-09!11;CL:0000827!4.15e-09!11;CL:0002031!9.09e-09!25;CL:0000034!1.48e-08!97;CL:0000738!7.25e-08!17;CL:0002087!7.25e-08!17;CL:0000144!3.31e-07!121;CL:0000012!3.31e-07!121;CL:0000723!3.36e-07!91;CL:0000048!3.36e-07!91;CL:0000791!5.04e-07!9;CL:0000789!5.04e-07!9;CL:0002420!5.04e-07!9;CL:0002419!5.04e-07!9;CL:0000790!5.04e-07!9|ontology_enrichment_celltype_v019_2=CL:0002320,7.66e-09,46;CL:0000134,7.66e-09,46;CL:0000624,1.90e-08,8;CL:0000815,2.16e-08,1;CL:0000792,2.16e-08,1;CL:0000213,3.50e-08,1;CL:0002078,3.50e-08,1;CL:0000115,3.50e-08,1;CL:0002262,3.50e-08,1;CL:1000398,3.50e-08,1;CL:0000791,1.45e-07,9;CL:0000789,1.45e-07,9;CL:0002420,1.45e-07,9;CL:0002419,1.45e-07,9;CL:0000790,1.45e-07,9;CL:0000219,2.03e-07,54;CL:0000034,2.06e-07,97|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002384!3.36e-14!46;UBERON:0002204!9.40e-07!32|ontology_enrichment_uberon_v019_2=UBERON:0002384,7.66e-09,46;UBERON:0002394,3.50e-08,1;UBERON:0001281,3.50e-08,1;UBERON:0000353,3.50e-08,1;UBERON:0003497,3.50e-08,1;UBERON:0003909,3.50e-08,1;UBERON:0003928,3.50e-08,1;UBERON:0003835,3.50e-08,1;UBERON:0003513,3.50e-08,1;UBERON:0001280,3.50e-08,1;UBERON:0004647,3.50e-08,1;UBERON:0002294,3.50e-08,1;UBERON:0001173,3.50e-08,1;UBERON:0004912,3.50e-08,1;UBERON:0005171,3.50e-08,1;UBERON:0001374,1.05e-07,1;UBERON:0004252,1.05e-07,1;UBERON:0003663,1.05e-07,1;UBERON:0005090,1.05e-07,1;UBERON:0001630,1.05e-07,1;UBERON:0003661,1.05e-07,1;UBERON:0010890,1.05e-07,1;UBERON:0001383,1.05e-07,1|phase1_expression=0.480446541314382,0,0,0,0,0,0,2.45334314538995,0.563154888606667,0.468129052643987,0,0.0797721589953364,1.36960583944965,2.53519167015092,0,0.202475267389826,0,0.157731082679119,0.411343300817216,0.42438965179803,0.0850432901510698,0.397163804803541,0.522399578277871,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.7813353445238,0.523523743973798,2.35292595212406,0,0.485510353031154,0,0.101376931219515,0,0,0,0,0,0,0,0.503347818173209,0,0.336093799142464,0.514518872071894,0,0,0,0,0,0,0,0,0.988866362566974,0,0,0.384218305321555,0,0,0,0.285650984403804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.302904773332736,0.226714680320357,1.44932244350839,0,0,0,0,0,0.280888840263504,1.02258193546835,1.29893002301434,0.70667914902068,0.14084341977668,0,0,0,0,0.253359865475099,0,0,0,0,0,0,0.230615497256059,0,0,0,0,0,0,0,0,0,0,0,0,0,0.599075622529601,2.39961092397363,0.635351135365324,0,0,0,0.173824320192276,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0.0680364991513279,0,0,0,0,0,0.175951124163949,0,0,0,0,0,1.40442637462647,0.257347907114715,0.284163499395593,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0,0.219550115291051,0.134206418760372,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369506380333209,0,0,0,0,0.167506257441816,0,0,0,0,0,0,0.172684981865896,0.144649058581512,0,0,0,0,0,0.117211686592203,0.163934945376675,1.00988370881749,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188605079755898,0,0,0,0,0,0,0,0,0,0,0,0.214337035031592,0,0,0,0,0,0,0,0.65954501176592,0.161464426695906,0.0603129249281559,0,0,0,0,0,0,0,0,0,0,1.18984900995699,2.6590775941495,1.10559979043539,0,0,0,0,0,0,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102710957164827,0,0,0.198681354781265,0,0,0.100966449948148,0.0762068066549998,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188626341386076,0,0.0640251524048693,0,0,0,0,0,0,0,0,0.238436189947321,0,0,0.0846146078916765,0,0,0,0,0,0,0,0,0,0,0,0,0.191288332068843,0.220591419119515,0.695603506861264|short_description=p@chr5:22892703..22892742,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=421 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr5:22892703..22892742,- | |||
|id=chr5:22892703..22892742,- | |||
|ontology_enrichment_celltype=CL:0002320!3.36e-14!46;CL:0000134!3.36e-14!46;CL:0000988!5.74e-14!32;CL:0002032!5.74e-14!32;CL:0000037!5.74e-14!32;CL:0000566!5.74e-14!32;CL:0000837!5.74e-14!32;CL:0000219!3.95e-13!54;CL:0000838!3.45e-10!12;CL:0000063!4.30e-10!66;CL:0000542!3.36e-09!13;CL:0000051!3.36e-09!13;CL:0000084!4.15e-09!11;CL:0000827!4.15e-09!11;CL:0002031!9.09e-09!25;CL:0000034!1.48e-08!97;CL:0000738!7.25e-08!17;CL:0002087!7.25e-08!17;CL:0000144!3.31e-07!121;CL:0000012!3.31e-07!121;CL:0000723!3.36e-07!91;CL:0000048!3.36e-07!91;CL:0000791!5.04e-07!9;CL:0000789!5.04e-07!9;CL:0002420!5.04e-07!9;CL:0002419!5.04e-07!9;CL:0000790!5.04e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002320,7.66e-09,46;CL:0000134,7.66e-09,46;CL:0000624,1.90e-08,8;CL:0000815,2.16e-08,1;CL:0000792,2.16e-08,1;CL:0000213,3.50e-08,1;CL:0002078,3.50e-08,1;CL:0000115,3.50e-08,1;CL:0002262,3.50e-08,1;CL:1000398,3.50e-08,1;CL:0000791,1.45e-07,9;CL:0000789,1.45e-07,9;CL:0002420,1.45e-07,9;CL:0002419,1.45e-07,9;CL:0000790,1.45e-07,9;CL:0000219,2.03e-07,54;CL:0000034,2.06e-07,97 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!3.36e-14!46;UBERON:0002204!9.40e-07!32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,7.66e-09,46;UBERON:0002394,3.50e-08,1;UBERON:0001281,3.50e-08,1;UBERON:0000353,3.50e-08,1;UBERON:0003497,3.50e-08,1;UBERON:0003909,3.50e-08,1;UBERON:0003928,3.50e-08,1;UBERON:0003835,3.50e-08,1;UBERON:0003513,3.50e-08,1;UBERON:0001280,3.50e-08,1;UBERON:0004647,3.50e-08,1;UBERON:0002294,3.50e-08,1;UBERON:0001173,3.50e-08,1;UBERON:0004912,3.50e-08,1;UBERON:0005171,3.50e-08,1;UBERON:0001374,1.05e-07,1;UBERON:0004252,1.05e-07,1;UBERON:0003663,1.05e-07,1;UBERON:0005090,1.05e-07,1;UBERON:0001630,1.05e-07,1;UBERON:0003661,1.05e-07,1;UBERON:0010890,1.05e-07,1;UBERON:0001383,1.05e-07,1 | |||
|phase1_expression=0.480446541314382,0,0,0,0,0,0,2.45334314538995,0.563154888606667,0.468129052643987,0,0.0797721589953364,1.36960583944965,2.53519167015092,0,0.202475267389826,0,0.157731082679119,0.411343300817216,0.42438965179803,0.0850432901510698,0.397163804803541,0.522399578277871,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.7813353445238,0.523523743973798,2.35292595212406,0,0.485510353031154,0,0.101376931219515,0,0,0,0,0,0,0,0.503347818173209,0,0.336093799142464,0.514518872071894,0,0,0,0,0,0,0,0,0.988866362566974,0,0,0.384218305321555,0,0,0,0.285650984403804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.302904773332736,0.226714680320357,1.44932244350839,0,0,0,0,0,0.280888840263504,1.02258193546835,1.29893002301434,0.70667914902068,0.14084341977668,0,0,0,0,0.253359865475099,0,0,0,0,0,0,0.230615497256059,0,0,0,0,0,0,0,0,0,0,0,0,0,0.599075622529601,2.39961092397363,0.635351135365324,0,0,0,0.173824320192276,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0.0680364991513279,0,0,0,0,0,0.175951124163949,0,0,0,0,0,1.40442637462647,0.257347907114715,0.284163499395593,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0,0.219550115291051,0.134206418760372,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369506380333209,0,0,0,0,0.167506257441816,0,0,0,0,0,0,0.172684981865896,0.144649058581512,0,0,0,0,0,0.117211686592203,0.163934945376675,1.00988370881749,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188605079755898,0,0,0,0,0,0,0,0,0,0,0,0.214337035031592,0,0,0,0,0,0,0,0.65954501176592,0.161464426695906,0.0603129249281559,0,0,0,0,0,0,0,0,0,0,1.18984900995699,2.6590775941495,1.10559979043539,0,0,0,0,0,0,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102710957164827,0,0,0.198681354781265,0,0,0.100966449948148,0.0762068066549998,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188626341386076,0,0.0640251524048693,0,0,0,0,0,0,0,0,0.238436189947321,0,0,0.0846146078916765,0,0,0,0,0,0,0,0,0,0,0,0,0.191288332068843,0.220591419119515,0.695603506861264 | |||
|short_description=p@chr5:22892703..22892742,- | |||
}} |
Revision as of 07:14, 14 September 2013
Short description: | p@chr5:22892703..22892742, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr5:22892703..22892742, - |
Coexpression cluster: | MCL_coexpression_mm9:421 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
connective tissue cell | 7.66e-09 | 46 |
mesenchymal cell | 7.66e-09 | 46 |
CD4-positive, alpha-beta T cell | 1.90e-08 | 8 |
regulatory T cell | 2.16e-08 | 1 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 2.16e-08 | 1 |
lining cell | 3.50e-08 | 1 |
meso-epithelial cell | 3.50e-08 | 1 |
endothelial cell | 3.50e-08 | 1 |
endothelial cell of sinusoid | 3.50e-08 | 1 |
endothelial cell of hepatic sinusoid | 3.50e-08 | 1 |
mature alpha-beta T cell | 1.45e-07 | 9 |
alpha-beta T cell | 1.45e-07 | 9 |
immature T cell | 1.45e-07 | 9 |
mature T cell | 1.45e-07 | 9 |
immature alpha-beta T cell | 1.45e-07 | 9 |
motile cell | 2.03e-07 | 54 |
stem cell | 2.06e-07 | 97 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 7.66e-09 | 46 |
bile duct | 3.50e-08 | 1 |
hepatic sinusoid | 3.50e-08 | 1 |
parenchyma | 3.50e-08 | 1 |
abdomen blood vessel | 3.50e-08 | 1 |
sinusoid | 3.50e-08 | 1 |
digestive system duct | 3.50e-08 | 1 |
abdominal segment blood vessel | 3.50e-08 | 1 |
trunk blood vessel | 3.50e-08 | 1 |
liver parenchyma | 3.50e-08 | 1 |
liver lobule | 3.50e-08 | 1 |
biliary system | 3.50e-08 | 1 |
biliary tree | 3.50e-08 | 1 |
biliary bud | 3.50e-08 | 1 |
hepatic duct | 3.50e-08 | 1 |
biceps femoris | 1.05e-07 | 1 |
hindlimb stylopod muscle | 1.05e-07 | 1 |
hindlimb muscle | 1.05e-07 | 1 |
muscle structure | 1.05e-07 | 1 |
muscle organ | 1.05e-07 | 1 |
limb muscle | 1.05e-07 | 1 |
pelvic complex muscle | 1.05e-07 | 1 |
muscle of leg | 1.05e-07 | 1 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.