FFCP PHASE1:Mm9::chr5:150214673..150214713,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=70717|HGNC=|MCL_coexpression_id=20|UniProt=|association_with_transcript=326bp_to_ENSMUST00000146189_5end|description=CAGE_peak_2_at_6330406I15Rik_5end|id=chr5:150214673..150214713,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000680,2.60e-10,6;CL:0000187,2.60e-10,6;CL:0000056,2.60e-10,6;CL:0000222,1.05e-08,7;CL:0002610,9.78e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000033!2.17e-12!63;UBERON:0004121!1.95e-11!102;UBERON:0000924!1.95e-11!102;UBERON:0006601!1.95e-11!102;UBERON:0000955!2.42e-11!50;UBERON:0006238!2.42e-11!50;UBERON:0002616!9.31e-11!49;UBERON:0001049!1.22e-10!52;UBERON:0005068!1.22e-10!52;UBERON:0006241!1.22e-10!52;UBERON:0007135!1.22e-10!52;UBERON:0002346!3.87e-10!71;UBERON:0003075!3.87e-10!71;UBERON:0007284!3.87e-10!71;UBERON:0001017!2.17e-09!73;UBERON:0005743!2.17e-09!73;UBERON:0000073!5.88e-09!75;UBERON:0001016!5.88e-09!75;UBERON:0003056!9.55e-09!49;UBERON:0004111!1.78e-08!122;UBERON:0007023!1.16e-07!51;UBERON:0003080!1.17e-07!40;UBERON:0002780!3.95e-07!39;UBERON:0001890!3.95e-07!39;UBERON:0006240!3.95e-07!39;UBERON:0000025!4.94e-07!114;UBERON:0002021!6.76e-07!10;UBERON:0000411!6.76e-07!10;UBERON:0001950!6.76e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.18e-14,54;UBERON:0000955,2.41e-14,47;UBERON:0006238,2.41e-14,47;UBERON:0002616,3.01e-13,46;UBERON:0007023,3.98e-13,51;UBERON:0001049,1.93e-12,52;UBERON:0005068,1.93e-12,52;UBERON:0006241,1.93e-12,52;UBERON:0007135,1.93e-12,52;UBERON:0001017,2.80e-11,73;UBERON:0002346,7.56e-11,64;UBERON:0003075,7.56e-11,64;UBERON:0007284,7.56e-11,64;UBERON:0001016,8.74e-11,75;UBERON:0003080,1.11e-09,40;UBERON:0010371,1.18e-09,73;UBERON:0002021,1.47e-09,10;UBERON:0000411,1.47e-09,10;UBERON:0001950,1.47e-09,10;UBERON:0004121,2.67e-09,95;UBERON:0000924,2.67e-09,95;UBERON:0006601,2.67e-09,95;UBERON:0003056,6.07e-09,49;UBERON:0002780,1.03e-08,39;UBERON:0001890,1.03e-08,39;UBERON:0006240,1.03e-08,39;UBERON:0004111,1.05e-08,122;UBERON:0010314,1.17e-08,92;UBERON:0003528,3.17e-08,29;UBERON:0002791,3.17e-08,29;UBERON:0001893,3.17e-08,29;UBERON:0000025,9.36e-08,114;UBERON:0002950,2.06e-07,4;UBERON:0001891,2.06e-07,4;UBERON:0009616,2.06e-07,4;UBERON:0010286,2.06e-07,4;UBERON:0000947,4.74e-07,4;UBERON:0001637,4.74e-07,4;UBERON:0004573,4.74e-07,4;UBERON:0003509,4.74e-07,4;UBERON:0004571,4.74e-07,4;UBERON:0010191,4.74e-07,4;UBERON:0004572,4.74e-07,4;UBERON:0004684,9.78e-07,3;UBERON:0002275,9.78e-07,3|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27564935226605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.78407908307194,4.66333883609767,3.12029478674859,0,0,0.219686182734472,0.777719596297134,0.279972843250725,0,0,0,0,5.14518872071894,10.8882707176728,1.54701627683233,0,0,0.633831403506179,0.338844532069132,0.889294796111139,0.449949858640699,0,0.7104801149461,0.299600110518405,0,0.103689612308478,0.135005938331691,0,0.285650984403804,0.883474163806454,0,0,0,6.60695285996332,8.42736431362239,13.5173749265494,0.131886287730194,0.365950574409639,0,9.77140496504833,1.68828783009504,3.36156145108982,0.883885756421003,0.427115042397309,0.186399445825301,0,0.0755715601067855,0.579728977403356,0,0,0.539703191637817,0,0,0.280888840263504,1.02258193546835,1.29893002301434,1.06001872353102,0.14084341977668,0,0,0,2.59789249213457,2.28023878927589,1.51657333504435,0.34255163915718,0,1.48442139064825,0,0,0,0.452167921657868,0.117588707135705,0.125666591329675,0.247194967734374,1.73519228303894,0.884610551949874,0.647067399789637,1.32504911076236,0.484875253135222,0,7.90508151931177,5.02672096352292,0,0,0,0,5.24267237916879,2.74500361691176,0,5.38855392596057,5.62574006126727,9.97382613885888,6.97637431191358,0.101839363850316,0.373220911830279,0,1.26265113531884,0,0.459804208866946,0,0.30140963567143,0.816437989815934,0.512454881139399,0.468508622798644,1.55222022443409,0,0,0,0,0,0.696504333044333,0.823128545631774,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16455984991348,0,0.243206428637567,0.730999937126662,0.439100230582101,0.268412837520744,2.10289948564127,0,0,0,0,0,0,0,0,0,0,0,0,0.198956472041151,0.19496408711912,0,0,0.199141273254367,0,0,0,0,0,0,0,0,0,0,0,0,0.196558995113203,0.224862112384854,0,0,0,0.287696137450811,0.162135226775035,0,0,0,0,0,0,0,2.77129785249907,0.189491411770485,0.162964976442026,0,0,0,0.238043640886014,0,0.315270288212382,0.8858587585951,0.478364305972461,0.327726629431476,1.03610989119537,0.867894351489069,0,0,0.491764273019036,0.551873492609465,13.8073507389501,8.43924143463863,2.45902418065013,0.252470927204373,0,0,0.215423397732799,0,0.222798674082394,0.283076530788832,0,0,0,5.14114106274891,0.567760340833074,0,0.325773918707152,0.329940245945071,0,0.242780636154981,0,0.188605079755898,0,0,0.258428293168221,0,0,0,0,0,5.10659408630682,0,0,0.428674070063185,0.354680467284547,0.713475270408282,0.329098041204242,0.304464949114599,1.64270195644597,1.90648863777438,1.10264199027481,2.80306630000516,0.645857706783622,0.663442174209714,0.954978752025092,0,0.291480836629851,10.7546675166096,0.170870880797853,0,0,0,0,0,0,0,0,0.954670618015114,0.158167996790568,0,0.108005340821801,0.209088296014469,0,0.134864346384821,0.165306911450672,0.26175594198403,0.648074866458964,0.621339313086926,0,0.149516546043979,0,0,0,0.168956125490778,0,0,0.104859344425711,0.483168241652012,0,0,0.202725215290164,0,0.25984164595559,0,0,0,0,0,0.0762068066549998,0,0,0,0.116876902181569,0,0,0,0,1.9318959403219,3.56596703357246,0.36630324853453,0.643105137237198,1.50471631210609,1.12950368523413,0.920650473014354,0.572895513439397,2.23409137046794,2.05524755931193,3.7769694869485,4.05013500139084,4.95353323546643,5.43770890781046,3.10656187051092,0.103787347584177,0,0,0.243106717068294,0,0,0.44449345560323,0.412070114477788,0.320919209591815,0,0.25347929989024,0.565879024158229,0,0.256100609619477,0.229741875822453,0.476293691283074,0.231768651889711,0,0,0,0.342869252385415,0.177475806159338,0.238436189947321,0.726732083161643,0.0941093804153306,0.25384382367503,0.182927972872773,0.263069711437843,0.135804113845862,0.561142271657738,0.474540072496697,0.197008964751127,0,0.154936841185966,0,0.499621155875892,0,0,0.382576664137687,0.661774257358546,0.695603506861264|short_description=p2@6330406I15Rik}} | ||
|EntrezGene=70717 | |||
|HGNC= | |||
|MCL_coexpression_id=20 | |||
|UniProt= | |||
|association_with_transcript=326bp_to_ENSMUST00000146189_5end | |||
|description=CAGE_peak_2_at_6330406I15Rik_5end | |||
|id=chr5:150214673..150214713,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000680,2.60e-10,6;CL:0000187,2.60e-10,6;CL:0000056,2.60e-10,6;CL:0000222,1.05e-08,7;CL:0002610,9.78e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!2.17e-12!63;UBERON:0004121!1.95e-11!102;UBERON:0000924!1.95e-11!102;UBERON:0006601!1.95e-11!102;UBERON:0000955!2.42e-11!50;UBERON:0006238!2.42e-11!50;UBERON:0002616!9.31e-11!49;UBERON:0001049!1.22e-10!52;UBERON:0005068!1.22e-10!52;UBERON:0006241!1.22e-10!52;UBERON:0007135!1.22e-10!52;UBERON:0002346!3.87e-10!71;UBERON:0003075!3.87e-10!71;UBERON:0007284!3.87e-10!71;UBERON:0001017!2.17e-09!73;UBERON:0005743!2.17e-09!73;UBERON:0000073!5.88e-09!75;UBERON:0001016!5.88e-09!75;UBERON:0003056!9.55e-09!49;UBERON:0004111!1.78e-08!122;UBERON:0007023!1.16e-07!51;UBERON:0003080!1.17e-07!40;UBERON:0002780!3.95e-07!39;UBERON:0001890!3.95e-07!39;UBERON:0006240!3.95e-07!39;UBERON:0000025!4.94e-07!114;UBERON:0002021!6.76e-07!10;UBERON:0000411!6.76e-07!10;UBERON:0001950!6.76e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.18e-14,54;UBERON:0000955,2.41e-14,47;UBERON:0006238,2.41e-14,47;UBERON:0002616,3.01e-13,46;UBERON:0007023,3.98e-13,51;UBERON:0001049,1.93e-12,52;UBERON:0005068,1.93e-12,52;UBERON:0006241,1.93e-12,52;UBERON:0007135,1.93e-12,52;UBERON:0001017,2.80e-11,73;UBERON:0002346,7.56e-11,64;UBERON:0003075,7.56e-11,64;UBERON:0007284,7.56e-11,64;UBERON:0001016,8.74e-11,75;UBERON:0003080,1.11e-09,40;UBERON:0010371,1.18e-09,73;UBERON:0002021,1.47e-09,10;UBERON:0000411,1.47e-09,10;UBERON:0001950,1.47e-09,10;UBERON:0004121,2.67e-09,95;UBERON:0000924,2.67e-09,95;UBERON:0006601,2.67e-09,95;UBERON:0003056,6.07e-09,49;UBERON:0002780,1.03e-08,39;UBERON:0001890,1.03e-08,39;UBERON:0006240,1.03e-08,39;UBERON:0004111,1.05e-08,122;UBERON:0010314,1.17e-08,92;UBERON:0003528,3.17e-08,29;UBERON:0002791,3.17e-08,29;UBERON:0001893,3.17e-08,29;UBERON:0000025,9.36e-08,114;UBERON:0002950,2.06e-07,4;UBERON:0001891,2.06e-07,4;UBERON:0009616,2.06e-07,4;UBERON:0010286,2.06e-07,4;UBERON:0000947,4.74e-07,4;UBERON:0001637,4.74e-07,4;UBERON:0004573,4.74e-07,4;UBERON:0003509,4.74e-07,4;UBERON:0004571,4.74e-07,4;UBERON:0010191,4.74e-07,4;UBERON:0004572,4.74e-07,4;UBERON:0004684,9.78e-07,3;UBERON:0002275,9.78e-07,3 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27564935226605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.78407908307194,4.66333883609767,3.12029478674859,0,0,0.219686182734472,0.777719596297134,0.279972843250725,0,0,0,0,5.14518872071894,10.8882707176728,1.54701627683233,0,0,0.633831403506179,0.338844532069132,0.889294796111139,0.449949858640699,0,0.7104801149461,0.299600110518405,0,0.103689612308478,0.135005938331691,0,0.285650984403804,0.883474163806454,0,0,0,6.60695285996332,8.42736431362239,13.5173749265494,0.131886287730194,0.365950574409639,0,9.77140496504833,1.68828783009504,3.36156145108982,0.883885756421003,0.427115042397309,0.186399445825301,0,0.0755715601067855,0.579728977403356,0,0,0.539703191637817,0,0,0.280888840263504,1.02258193546835,1.29893002301434,1.06001872353102,0.14084341977668,0,0,0,2.59789249213457,2.28023878927589,1.51657333504435,0.34255163915718,0,1.48442139064825,0,0,0,0.452167921657868,0.117588707135705,0.125666591329675,0.247194967734374,1.73519228303894,0.884610551949874,0.647067399789637,1.32504911076236,0.484875253135222,0,7.90508151931177,5.02672096352292,0,0,0,0,5.24267237916879,2.74500361691176,0,5.38855392596057,5.62574006126727,9.97382613885888,6.97637431191358,0.101839363850316,0.373220911830279,0,1.26265113531884,0,0.459804208866946,0,0.30140963567143,0.816437989815934,0.512454881139399,0.468508622798644,1.55222022443409,0,0,0,0,0,0.696504333044333,0.823128545631774,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16455984991348,0,0.243206428637567,0.730999937126662,0.439100230582101,0.268412837520744,2.10289948564127,0,0,0,0,0,0,0,0,0,0,0,0,0.198956472041151,0.19496408711912,0,0,0.199141273254367,0,0,0,0,0,0,0,0,0,0,0,0,0.196558995113203,0.224862112384854,0,0,0,0.287696137450811,0.162135226775035,0,0,0,0,0,0,0,2.77129785249907,0.189491411770485,0.162964976442026,0,0,0,0.238043640886014,0,0.315270288212382,0.8858587585951,0.478364305972461,0.327726629431476,1.03610989119537,0.867894351489069,0,0,0.491764273019036,0.551873492609465,13.8073507389501,8.43924143463863,2.45902418065013,0.252470927204373,0,0,0.215423397732799,0,0.222798674082394,0.283076530788832,0,0,0,5.14114106274891,0.567760340833074,0,0.325773918707152,0.329940245945071,0,0.242780636154981,0,0.188605079755898,0,0,0.258428293168221,0,0,0,0,0,5.10659408630682,0,0,0.428674070063185,0.354680467284547,0.713475270408282,0.329098041204242,0.304464949114599,1.64270195644597,1.90648863777438,1.10264199027481,2.80306630000516,0.645857706783622,0.663442174209714,0.954978752025092,0,0.291480836629851,10.7546675166096,0.170870880797853,0,0,0,0,0,0,0,0,0.954670618015114,0.158167996790568,0,0.108005340821801,0.209088296014469,0,0.134864346384821,0.165306911450672,0.26175594198403,0.648074866458964,0.621339313086926,0,0.149516546043979,0,0,0,0.168956125490778,0,0,0.104859344425711,0.483168241652012,0,0,0.202725215290164,0,0.25984164595559,0,0,0,0,0,0.0762068066549998,0,0,0,0.116876902181569,0,0,0,0,1.9318959403219,3.56596703357246,0.36630324853453,0.643105137237198,1.50471631210609,1.12950368523413,0.920650473014354,0.572895513439397,2.23409137046794,2.05524755931193,3.7769694869485,4.05013500139084,4.95353323546643,5.43770890781046,3.10656187051092,0.103787347584177,0,0,0.243106717068294,0,0,0.44449345560323,0.412070114477788,0.320919209591815,0,0.25347929989024,0.565879024158229,0,0.256100609619477,0.229741875822453,0.476293691283074,0.231768651889711,0,0,0,0.342869252385415,0.177475806159338,0.238436189947321,0.726732083161643,0.0941093804153306,0.25384382367503,0.182927972872773,0.263069711437843,0.135804113845862,0.561142271657738,0.474540072496697,0.197008964751127,0,0.154936841185966,0,0.499621155875892,0,0,0.382576664137687,0.661774257358546,0.695603506861264 | |||
|short_description=p2@6330406I15Rik | |||
}} |
Revision as of 07:08, 14 September 2013
Short description: | p2@6330406I15Rik |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_6330406I15Rik_5end |
Coexpression cluster: | MCL_coexpression_mm9:20 |
Association with transcript: | 326bp_to_ENSMUST00000146189_5end |
EntrezGene: | 6330406I15Rik |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
muscle precursor cell | 2.60e-10 | 6 |
muscle cell | 2.60e-10 | 6 |
myoblast | 2.60e-10 | 6 |
mesodermal cell | 1.05e-08 | 7 |
raphe nuclei neuron | 9.78e-07 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.