FFCP PHASE1:Mm9::chr5:149076477..149076494,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=77521|HGNC=|MCL_coexpression_id=45|UniProt=Q3UHD3,D3YY58|association_with_transcript=-298bp_to_ENSMUST00000110515,uc009aop.2,uc012ehc.1_5end|description=CAGE_peak_9_at_Mtus2_5end|id=chr5:149076477..149076494,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007100!4.50e-16!18;UBERON:0000948!4.50e-16!18;UBERON:0005498!4.50e-16!18;UBERON:0004140!4.50e-16!18;UBERON:0009881!4.50e-16!18;UBERON:0004141!4.50e-16!18;UBERON:0003084!4.50e-16!18;UBERON:0007005!4.50e-16!18;UBERON:0004139!4.50e-16!18;UBERON:0004291!4.50e-16!18;UBERON:0004535!2.72e-11!23;UBERON:0001009!2.72e-11!23;UBERON:0003103!1.71e-07!43|ontology_enrichment_uberon_v019_2=UBERON:0007100,1.23e-43,18;UBERON:0000948,1.23e-43,18;UBERON:0005498,1.23e-43,18;UBERON:0004140,1.23e-43,18;UBERON:0009881,1.23e-43,18;UBERON:0004141,1.23e-43,18;UBERON:0003084,1.23e-43,18;UBERON:0007005,1.23e-43,18;UBERON:0004139,1.23e-43,18;UBERON:0004291,1.23e-43,18;UBERON:0004535,7.47e-34,23;UBERON:0001009,7.47e-34,23;UBERON:0004872,3.71e-23,33;UBERON:0003103,2.03e-17,43;UBERON:0003914,8.35e-16,47;UBERON:0010314,1.24e-08,92;UBERON:0000013,5.02e-08,3;UBERON:0003081,8.83e-08,87|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286533439938757,0,0.202316460859598,0,0.633831403506179,0,0,0,0,0,0,0,0,0,0,0,0.220868540951614,0.244981598429908,0.0958454710182364,0,0,0.127687338085188,0,0.791317726381163,0.274462930807229,0,0,0.56276261003168,0,0,0.142371680799103,0.186399445825301,0,0,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0,0,0,0.304465478312141,0,0.150722640552623,0.117588707135705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149790639404823,0,0.251308704225729,0,0.255715457330331,0,0.486723789203273,0,0,0,0,0.130120442962704,0.689706313300419,0.540186389416048,0.150704817835715,0.544291993210623,0.512454881139399,0.468508622798644,0,0.215567992932842,0,0,0,0,0,0,0,0,0,0,2.07125772535502,4.69052119962192,3.06105504483725,4.26140524053378,6.49321964766433,6.47921874126989,4.41814495025775,4.82892122519315,5.13767506415546,3.78487654801005,2.13417703302824,0.648550476366846,0.730999937126662,1.3173006917463,0.671032093801859,0,0,0,0,0,1.16118335930219,0.128867461322093,0.201683524623343,0,0.190225626112559,0,0.164698954724011,0.502670417600539,0,0,0,0,0,0.189667900953082,0,0,0.203651327845314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0.162964976442026,0.169745085775188,0,0,0,0.195133647857799,0,0,0,0,0,0,0,0,0,0,0,0.35163505977661,0,0,0,0.780877488593277,0.646270193198397,0,0,0,0.404810701674894,1.46127928955656,1.18586333383957,0,0,0,0.162886959353576,0,0,0.242780636154981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354680467284547,0.178368817602071,0,0,0,0,0,0,0,0,0,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0,0.216010681643603,0,0.218362563746178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14579102687879,0,0.685082519770642,0.755393897389701,0,0,0,0.51776031175182,0.103787347584177,0.798049746802062,0.341467211508268,0,0.209613162627982,0.183843508450014,0.222246727801615,0,0.320919209591815,0,0.25347929989024,0,0.0936415074698824,0.0640251524048693,0.114870937911227,0,0,0.38581844092741,0.412085900803307,0.147198920134397,0.685738504770831,0.177475806159338,0,0.290692833264657,0,0.338458431566706,0,0.526139422875686,0,0.561142271657738,0,0,0,0,0,0,0,0.214871054048298,0.382576664137687,0,0|short_description=p9@Mtus2}} | ||
|EntrezGene=77521 | |||
|HGNC= | |||
|MCL_coexpression_id=45 | |||
|UniProt=Q3UHD3,D3YY58 | |||
|association_with_transcript=-298bp_to_ENSMUST00000110515,uc009aop.2,uc012ehc.1_5end | |||
|description=CAGE_peak_9_at_Mtus2_5end | |||
|id=chr5:149076477..149076494,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007100!4.50e-16!18;UBERON:0000948!4.50e-16!18;UBERON:0005498!4.50e-16!18;UBERON:0004140!4.50e-16!18;UBERON:0009881!4.50e-16!18;UBERON:0004141!4.50e-16!18;UBERON:0003084!4.50e-16!18;UBERON:0007005!4.50e-16!18;UBERON:0004139!4.50e-16!18;UBERON:0004291!4.50e-16!18;UBERON:0004535!2.72e-11!23;UBERON:0001009!2.72e-11!23;UBERON:0003103!1.71e-07!43 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007100,1.23e-43,18;UBERON:0000948,1.23e-43,18;UBERON:0005498,1.23e-43,18;UBERON:0004140,1.23e-43,18;UBERON:0009881,1.23e-43,18;UBERON:0004141,1.23e-43,18;UBERON:0003084,1.23e-43,18;UBERON:0007005,1.23e-43,18;UBERON:0004139,1.23e-43,18;UBERON:0004291,1.23e-43,18;UBERON:0004535,7.47e-34,23;UBERON:0001009,7.47e-34,23;UBERON:0004872,3.71e-23,33;UBERON:0003103,2.03e-17,43;UBERON:0003914,8.35e-16,47;UBERON:0010314,1.24e-08,92;UBERON:0000013,5.02e-08,3;UBERON:0003081,8.83e-08,87 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286533439938757,0,0.202316460859598,0,0.633831403506179,0,0,0,0,0,0,0,0,0,0,0,0.220868540951614,0.244981598429908,0.0958454710182364,0,0,0.127687338085188,0,0.791317726381163,0.274462930807229,0,0,0.56276261003168,0,0,0.142371680799103,0.186399445825301,0,0,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0,0,0,0.304465478312141,0,0.150722640552623,0.117588707135705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149790639404823,0,0.251308704225729,0,0.255715457330331,0,0.486723789203273,0,0,0,0,0.130120442962704,0.689706313300419,0.540186389416048,0.150704817835715,0.544291993210623,0.512454881139399,0.468508622798644,0,0.215567992932842,0,0,0,0,0,0,0,0,0,0,2.07125772535502,4.69052119962192,3.06105504483725,4.26140524053378,6.49321964766433,6.47921874126989,4.41814495025775,4.82892122519315,5.13767506415546,3.78487654801005,2.13417703302824,0.648550476366846,0.730999937126662,1.3173006917463,0.671032093801859,0,0,0,0,0,1.16118335930219,0.128867461322093,0.201683524623343,0,0.190225626112559,0,0.164698954724011,0.502670417600539,0,0,0,0,0,0.189667900953082,0,0,0.203651327845314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0.162964976442026,0.169745085775188,0,0,0,0.195133647857799,0,0,0,0,0,0,0,0,0,0,0,0.35163505977661,0,0,0,0.780877488593277,0.646270193198397,0,0,0,0.404810701674894,1.46127928955656,1.18586333383957,0,0,0,0.162886959353576,0,0,0.242780636154981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354680467284547,0.178368817602071,0,0,0,0,0,0,0,0,0,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0,0.216010681643603,0,0.218362563746178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14579102687879,0,0.685082519770642,0.755393897389701,0,0,0,0.51776031175182,0.103787347584177,0.798049746802062,0.341467211508268,0,0.209613162627982,0.183843508450014,0.222246727801615,0,0.320919209591815,0,0.25347929989024,0,0.0936415074698824,0.0640251524048693,0.114870937911227,0,0,0.38581844092741,0.412085900803307,0.147198920134397,0.685738504770831,0.177475806159338,0,0.290692833264657,0,0.338458431566706,0,0.526139422875686,0,0.561142271657738,0,0,0,0,0,0,0,0.214871054048298,0.382576664137687,0,0 | |||
|short_description=p9@Mtus2 | |||
}} |
Revision as of 07:04, 14 September 2013
Short description: | p9@Mtus2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_9_at_Mtus2_5end |
Coexpression cluster: | MCL_coexpression_mm9:45 |
Association with transcript: | -298bp_to_ENSMUST00000110515, uc009aop.2, uc012ehc.1_5end |
EntrezGene: | Mtus2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
primary circulatory organ | 1.23e-43 | 18 |
heart | 1.23e-43 | 18 |
primitive heart tube | 1.23e-43 | 18 |
primary heart field | 1.23e-43 | 18 |
anterior lateral plate mesoderm | 1.23e-43 | 18 |
heart tube | 1.23e-43 | 18 |
heart primordium | 1.23e-43 | 18 |
cardiac mesoderm | 1.23e-43 | 18 |
cardiogenic plate | 1.23e-43 | 18 |
heart rudiment | 1.23e-43 | 18 |
cardiovascular system | 7.47e-34 | 23 |
circulatory system | 7.47e-34 | 23 |
splanchnic layer of lateral plate mesoderm | 3.71e-23 | 33 |
compound organ | 2.03e-17 | 43 |
epithelial tube | 8.35e-16 | 47 |
structure with developmental contribution from neural crest | 1.24e-08 | 92 |
sympathetic nervous system | 5.02e-08 | 3 |
lateral plate mesoderm | 8.83e-08 | 87 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.