FFCP PHASE1:Mm9::chr5:147396403..147396456,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=14738|HGNC=|MCL_coexpression_id=1|UniProt=P35412|association_with_transcript=358bp_to_ENSMUST00000036211,NM_001010941,uc009ani.1,uc012ehb.1_5end|description=CAGE_peak_1_at_Gpr12_5end|id=chr5:147396403..147396456,-|ontology_enrichment_celltype=CL:0000117!4.49e-18!23;CL:0000337!4.49e-18!23;CL:0000540!1.96e-11!33;CL:0000047!1.96e-11!33;CL:0000031!1.96e-11!33;CL:0000404!1.96e-11!33;CL:0000221!1.67e-10!44;CL:0000133!1.67e-10!44;CL:0002319!2.86e-10!43;CL:0000393!2.79e-08!39;CL:0000211!2.79e-08!39;CL:0000055!1.92e-07!50|ontology_enrichment_celltype_v019_2=CL:0000117,1.89e-22,23;CL:0000337,1.89e-22,23;CL:0000540,3.19e-13,33;CL:0000047,3.19e-13,33;CL:0000031,3.19e-13,33;CL:0000404,3.19e-13,33;CL:0002319,3.48e-10,43;CL:0000393,4.80e-10,39;CL:0000211,4.80e-10,39;CL:0000221,8.87e-10,44;CL:0000133,8.87e-10,44|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!3.52e-34!52;UBERON:0005068!3.52e-34!52;UBERON:0006241!3.52e-34!52;UBERON:0007135!3.52e-34!52;UBERON:0000955!1.01e-32!50;UBERON:0006238!1.01e-32!50;UBERON:0000033!1.05e-32!63;UBERON:0001017!1.05e-32!73;UBERON:0005743!1.05e-32!73;UBERON:0002616!8.55e-32!49;UBERON:0000073!3.57e-31!75;UBERON:0001016!3.57e-31!75;UBERON:0002346!3.29e-28!71;UBERON:0003075!3.29e-28!71;UBERON:0007284!3.29e-28!71;UBERON:0003056!8.25e-28!49;UBERON:0002020!1.85e-27!34;UBERON:0003080!8.73e-27!40;UBERON:0002780!6.66e-26!39;UBERON:0001890!6.66e-26!39;UBERON:0006240!6.66e-26!39;UBERON:0004121!1.12e-23!102;UBERON:0000924!1.12e-23!102;UBERON:0006601!1.12e-23!102;UBERON:0002791!2.71e-23!29;UBERON:0003528!2.71e-23!29;UBERON:0001893!2.71e-23!29;UBERON:0007811!9.94e-19!86;UBERON:0000956!9.04e-17!21;UBERON:0001869!9.04e-17!21;UBERON:0000203!9.04e-17!21;UBERON:0000153!4.85e-16!94;UBERON:0002619!6.30e-14!17;UBERON:0002021!2.84e-10!10;UBERON:0000411!2.84e-10!10;UBERON:0001950!2.84e-10!10;UBERON:0003076!1.17e-07!12;UBERON:0003057!1.17e-07!12;UBERON:0002420!1.23e-07!8;UBERON:0007245!1.23e-07!8;UBERON:0010009!1.23e-07!8;UBERON:0010011!1.23e-07!8;UBERON:0000454!1.23e-07!8|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.37e-36,54;UBERON:0001049,7.15e-34,52;UBERON:0005068,7.15e-34,52;UBERON:0006241,7.15e-34,52;UBERON:0007135,7.15e-34,52;UBERON:0002020,1.72e-31,34;UBERON:0001017,1.74e-31,73;UBERON:0001016,3.55e-30,75;UBERON:0002346,2.61e-29,64;UBERON:0003075,2.61e-29,64;UBERON:0007284,2.61e-29,64;UBERON:0000955,7.89e-29,47;UBERON:0006238,7.89e-29,47;UBERON:0002616,9.45e-28,46;UBERON:0003528,2.90e-26,29;UBERON:0002791,2.90e-26,29;UBERON:0001893,2.90e-26,29;UBERON:0003080,1.31e-24,40;UBERON:0004121,8.53e-24,95;UBERON:0000924,8.53e-24,95;UBERON:0006601,8.53e-24,95;UBERON:0010371,1.00e-23,73;UBERON:0002780,1.44e-23,39;UBERON:0001890,1.44e-23,39;UBERON:0006240,1.44e-23,39;UBERON:0003056,2.03e-22,49;UBERON:0000956,4.19e-18,21;UBERON:0001869,4.19e-18,21;UBERON:0000203,4.19e-18,21;UBERON:0010314,1.21e-15,92;UBERON:0002619,1.56e-14,17;UBERON:0002021,1.41e-12,10;UBERON:0000411,1.41e-12,10;UBERON:0001950,1.41e-12,10;UBERON:0003076,1.89e-09,12;UBERON:0003057,1.89e-09,12;UBERON:0002420,3.02e-09,8;UBERON:0007245,3.02e-09,8;UBERON:0010009,3.02e-09,8;UBERON:0010011,3.02e-09,8;UBERON:0000454,3.02e-09,8;UBERON:0000025,8.24e-08,114;UBERON:0002240,4.80e-07,6;UBERON:0005174,4.80e-07,6;UBERON:0001137,4.80e-07,6|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.04103896362567,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.70642765846759,0.219686182734472,0.194429899074283,1.1198913730029,0,0,0,0,0,0,0,8.29497489524351,12.6957835025288,10.1413024560989,0,0,0,0,0,0,0.768436610643109,6.22137673850866,6.88530285491622,6.73039876324422,12.8542942981712,8.83474163806454,6.24703075996266,6.13411014516713,4.5960939330501,9.91042928994498,16.98241596533,15.8214729253931,7.64940468835124,10.9785172322892,4.16730696445408,8.65467296904281,14.6318278608237,12.6822545654752,16.2045722010517,12.386336229522,9.87917062874093,0,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0.281686839553361,0,0,0,0,0,0,0.34255163915718,0,0,0,0,0,0,0,0,0,0,1.76922110389975,0,0,0,0,4.09893115816166,2.72280718857492,0,0,0,0,13.1815762676244,37.5150494311274,20.356005042284,15.8180131374972,12.7857728665165,21.4021685896347,17.6842976743856,0,0.124406970610093,0,0.420883711772948,0.130120442962704,0,0.180062129805349,0.30140963567143,1.08858398642125,1.0249097622788,1.03071897015702,1.55222022443409,0,0,0.351902248327898,0,0,0,0,0.398068533636986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0,0,19.1363853193356,19.8605901892019,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0,0.193952487167626,0,0.0632365371242573,0.147610147979602,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.26147300952389,4.33683240391152,0,0,0,0,0.215423397732799,0,0,0,0,0,0,14.1381379225595,0,0.178065603667255,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0,0,0,3.40439605753788,0.18006109403131,0.388076051348264,0,0.354680467284547,0.535106452806212,0.493647061806363,1.8267896946876,0,0,0,0,0,0,0,0,0,5.7481843623258,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0,0,0,0,0.269728692769641,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100826185136841,0,0,0,0,0,0,0,0,1.12609485270709,0.183151624267265,0,0,21.4605700194485,21.6352861158373,24.6345070778941,18.9038500578056,18.4972280338073,18.1294535373528,10.1253375034771,12.158672487054,15.8599843144472,19.1571315348173,0.103787347584177,0,0.682934423016537,1.45864030240976,1.25767897576789,2.38996560985018,0.888986911206461,1.85431551515005,3.20919209591815,2.77966932940177,3.54871019846336,2.82939512079114,1.31098110457835,2.68905640100451,2.81433797882505,3.33405583898152,2.31768651889711,1.92909220463705,2.06042950401653,3.38557516309114,2.05721551431249,2.8396128985494,1.90748951957857,2.0348498328526,1.97629698872194,1.77690676572521,2.37806364734604,2.63069711437843,2.58027816307137,1.12228454331548,3.2031454893527,1.67457620038458,1.22769312950907,2.01417893541756,1.54325288784913,6.74488560432454,2.10538447600868,0.859484216193193,0.57386499620653,0.220591419119515,0|short_description=p1@Gpr12}} | ||
|EntrezGene=14738 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|UniProt=P35412 | |||
|association_with_transcript=358bp_to_ENSMUST00000036211,NM_001010941,uc009ani.1,uc012ehb.1_5end | |||
|description=CAGE_peak_1_at_Gpr12_5end | |||
|id=chr5:147396403..147396456,- | |||
|ontology_enrichment_celltype=CL:0000117!4.49e-18!23;CL:0000337!4.49e-18!23;CL:0000540!1.96e-11!33;CL:0000047!1.96e-11!33;CL:0000031!1.96e-11!33;CL:0000404!1.96e-11!33;CL:0000221!1.67e-10!44;CL:0000133!1.67e-10!44;CL:0002319!2.86e-10!43;CL:0000393!2.79e-08!39;CL:0000211!2.79e-08!39;CL:0000055!1.92e-07!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.89e-22,23;CL:0000337,1.89e-22,23;CL:0000540,3.19e-13,33;CL:0000047,3.19e-13,33;CL:0000031,3.19e-13,33;CL:0000404,3.19e-13,33;CL:0002319,3.48e-10,43;CL:0000393,4.80e-10,39;CL:0000211,4.80e-10,39;CL:0000221,8.87e-10,44;CL:0000133,8.87e-10,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!3.52e-34!52;UBERON:0005068!3.52e-34!52;UBERON:0006241!3.52e-34!52;UBERON:0007135!3.52e-34!52;UBERON:0000955!1.01e-32!50;UBERON:0006238!1.01e-32!50;UBERON:0000033!1.05e-32!63;UBERON:0001017!1.05e-32!73;UBERON:0005743!1.05e-32!73;UBERON:0002616!8.55e-32!49;UBERON:0000073!3.57e-31!75;UBERON:0001016!3.57e-31!75;UBERON:0002346!3.29e-28!71;UBERON:0003075!3.29e-28!71;UBERON:0007284!3.29e-28!71;UBERON:0003056!8.25e-28!49;UBERON:0002020!1.85e-27!34;UBERON:0003080!8.73e-27!40;UBERON:0002780!6.66e-26!39;UBERON:0001890!6.66e-26!39;UBERON:0006240!6.66e-26!39;UBERON:0004121!1.12e-23!102;UBERON:0000924!1.12e-23!102;UBERON:0006601!1.12e-23!102;UBERON:0002791!2.71e-23!29;UBERON:0003528!2.71e-23!29;UBERON:0001893!2.71e-23!29;UBERON:0007811!9.94e-19!86;UBERON:0000956!9.04e-17!21;UBERON:0001869!9.04e-17!21;UBERON:0000203!9.04e-17!21;UBERON:0000153!4.85e-16!94;UBERON:0002619!6.30e-14!17;UBERON:0002021!2.84e-10!10;UBERON:0000411!2.84e-10!10;UBERON:0001950!2.84e-10!10;UBERON:0003076!1.17e-07!12;UBERON:0003057!1.17e-07!12;UBERON:0002420!1.23e-07!8;UBERON:0007245!1.23e-07!8;UBERON:0010009!1.23e-07!8;UBERON:0010011!1.23e-07!8;UBERON:0000454!1.23e-07!8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.37e-36,54;UBERON:0001049,7.15e-34,52;UBERON:0005068,7.15e-34,52;UBERON:0006241,7.15e-34,52;UBERON:0007135,7.15e-34,52;UBERON:0002020,1.72e-31,34;UBERON:0001017,1.74e-31,73;UBERON:0001016,3.55e-30,75;UBERON:0002346,2.61e-29,64;UBERON:0003075,2.61e-29,64;UBERON:0007284,2.61e-29,64;UBERON:0000955,7.89e-29,47;UBERON:0006238,7.89e-29,47;UBERON:0002616,9.45e-28,46;UBERON:0003528,2.90e-26,29;UBERON:0002791,2.90e-26,29;UBERON:0001893,2.90e-26,29;UBERON:0003080,1.31e-24,40;UBERON:0004121,8.53e-24,95;UBERON:0000924,8.53e-24,95;UBERON:0006601,8.53e-24,95;UBERON:0010371,1.00e-23,73;UBERON:0002780,1.44e-23,39;UBERON:0001890,1.44e-23,39;UBERON:0006240,1.44e-23,39;UBERON:0003056,2.03e-22,49;UBERON:0000956,4.19e-18,21;UBERON:0001869,4.19e-18,21;UBERON:0000203,4.19e-18,21;UBERON:0010314,1.21e-15,92;UBERON:0002619,1.56e-14,17;UBERON:0002021,1.41e-12,10;UBERON:0000411,1.41e-12,10;UBERON:0001950,1.41e-12,10;UBERON:0003076,1.89e-09,12;UBERON:0003057,1.89e-09,12;UBERON:0002420,3.02e-09,8;UBERON:0007245,3.02e-09,8;UBERON:0010009,3.02e-09,8;UBERON:0010011,3.02e-09,8;UBERON:0000454,3.02e-09,8;UBERON:0000025,8.24e-08,114;UBERON:0002240,4.80e-07,6;UBERON:0005174,4.80e-07,6;UBERON:0001137,4.80e-07,6 | |||
|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.04103896362567,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.70642765846759,0.219686182734472,0.194429899074283,1.1198913730029,0,0,0,0,0,0,0,8.29497489524351,12.6957835025288,10.1413024560989,0,0,0,0,0,0,0.768436610643109,6.22137673850866,6.88530285491622,6.73039876324422,12.8542942981712,8.83474163806454,6.24703075996266,6.13411014516713,4.5960939330501,9.91042928994498,16.98241596533,15.8214729253931,7.64940468835124,10.9785172322892,4.16730696445408,8.65467296904281,14.6318278608237,12.6822545654752,16.2045722010517,12.386336229522,9.87917062874093,0,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0.281686839553361,0,0,0,0,0,0,0.34255163915718,0,0,0,0,0,0,0,0,0,0,1.76922110389975,0,0,0,0,4.09893115816166,2.72280718857492,0,0,0,0,13.1815762676244,37.5150494311274,20.356005042284,15.8180131374972,12.7857728665165,21.4021685896347,17.6842976743856,0,0.124406970610093,0,0.420883711772948,0.130120442962704,0,0.180062129805349,0.30140963567143,1.08858398642125,1.0249097622788,1.03071897015702,1.55222022443409,0,0,0.351902248327898,0,0,0,0,0.398068533636986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0,0,19.1363853193356,19.8605901892019,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0,0.193952487167626,0,0.0632365371242573,0.147610147979602,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.26147300952389,4.33683240391152,0,0,0,0,0.215423397732799,0,0,0,0,0,0,14.1381379225595,0,0.178065603667255,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0,0,0,3.40439605753788,0.18006109403131,0.388076051348264,0,0.354680467284547,0.535106452806212,0.493647061806363,1.8267896946876,0,0,0,0,0,0,0,0,0,5.7481843623258,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0,0,0,0,0.269728692769641,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100826185136841,0,0,0,0,0,0,0,0,1.12609485270709,0.183151624267265,0,0,21.4605700194485,21.6352861158373,24.6345070778941,18.9038500578056,18.4972280338073,18.1294535373528,10.1253375034771,12.158672487054,15.8599843144472,19.1571315348173,0.103787347584177,0,0.682934423016537,1.45864030240976,1.25767897576789,2.38996560985018,0.888986911206461,1.85431551515005,3.20919209591815,2.77966932940177,3.54871019846336,2.82939512079114,1.31098110457835,2.68905640100451,2.81433797882505,3.33405583898152,2.31768651889711,1.92909220463705,2.06042950401653,3.38557516309114,2.05721551431249,2.8396128985494,1.90748951957857,2.0348498328526,1.97629698872194,1.77690676572521,2.37806364734604,2.63069711437843,2.58027816307137,1.12228454331548,3.2031454893527,1.67457620038458,1.22769312950907,2.01417893541756,1.54325288784913,6.74488560432454,2.10538447600868,0.859484216193193,0.57386499620653,0.220591419119515,0 | |||
|short_description=p1@Gpr12 | |||
}} |
Revision as of 07:02, 14 September 2013
Short description: | p1@Gpr12 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Gpr12_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 358bp_to_ENSMUST00000036211, NM_001010941, uc009ani.1, uc012ehb.1_5end |
EntrezGene: | Gpr12 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.89e-22 | 23 |
neuroblast (sensu Vertebrata) | 1.89e-22 | 23 |
neuron | 3.19e-13 | 33 |
neuronal stem cell | 3.19e-13 | 33 |
neuroblast | 3.19e-13 | 33 |
electrically signaling cell | 3.19e-13 | 33 |
neural cell | 3.48e-10 | 43 |
electrically responsive cell | 4.80e-10 | 39 |
electrically active cell | 4.80e-10 | 39 |
ectodermal cell | 8.87e-10 | 44 |
neurectodermal cell | 8.87e-10 | 44 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.