FFCP PHASE1:Hg19::chr9:115653061..115653073,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=57864|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=16055|TSSclassifier=S|UniProt=|association_with_transcript=16bp_to_ENST00000491462_5end|coexpression_cluster_id=C4790|description=CAGE_peak_4_at_SLC46A2_5end|id=chr9:115653061..115653073,-|ontology_enrichment_celltype=CL:0002057!2.53e-47!42;CL:0000860!1.92e-43!45;CL:0002194!4.43e-35!63;CL:0000576!4.43e-35!63;CL:0000040!4.43e-35!63;CL:0000559!4.43e-35!63;CL:0002009!1.16e-33!65;CL:0000839!1.79e-30!70;CL:0000557!6.86e-30!71;CL:0000766!8.12e-29!76;CL:0002087!5.12e-20!119;CL:0002393!3.56e-19!9;CL:0002397!3.56e-19!9;CL:0002031!1.30e-16!124;CL:0000738!3.94e-16!140;CL:0000763!4.83e-16!112;CL:0000049!4.83e-16!112;CL:0000037!5.79e-11!172;CL:0000566!5.79e-11!172;CL:0002032!1.89e-10!165;CL:0000837!1.89e-10!165;CL:0000988!9.41e-10!182;CL:0000875!5.59e-08!3;CL:0002396!5.59e-08!3|ontology_enrichment_celltype_v019=CL:0000875;7.55e-24;3!CL:0002396;7.55e-24;3!CL:0002393;3.84e-20;6!CL:0002397;3.84e-20;6!CL:0000576;5.70e-16;48!CL:0000766;4.34e-12;69!CL:0000860;1.12e-09;33!CL:0002057;1.12e-09;33!CL:0000473;1.30e-07;39!CL:0000234;1.30e-07;39|ontology_enrichment_celltype_v019_2=CL:0002393,1.83e-40,9;CL:0002397,1.83e-40,9;CL:0000860,1.66e-32,42;CL:0002057,1.66e-32,42;CL:0000473,4.03e-28,48;CL:0000234,4.03e-28,48;CL:0000875,7.29e-24,3;CL:0002396,7.29e-24,3;CL:0002194,5.60e-22,59;CL:0000576,5.60e-22,59;CL:0000040,5.60e-22,59;CL:0000559,5.60e-22,59;CL:0002009,3.48e-21,61;CL:0000839,2.08e-19,66;CL:0000557,4.38e-19,67;CL:0000766,1.34e-17,72;CL:0002087,9.92e-12,115;CL:0002031,3.96e-11,120;CL:0000763,6.38e-11,108;CL:0000049,6.38e-11,108;CL:0000738,1.69e-09,136;CL:0002032,1.33e-07,161;CL:0000837,1.33e-07,161;CL:0000037,3.59e-07,168|ontology_enrichment_development_v019=CL:0002057;2.23e-22;42|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!4.62e-41!102;UBERON:0003061!4.62e-41!102;UBERON:0002193!2.56e-39!112;UBERON:0007023!8.95e-32!115;UBERON:0002371!2.67e-25!80;UBERON:0001474!8.85e-23!86;UBERON:0002405!5.73e-21!115;UBERON:0004765!5.07e-19!101;UBERON:0001434!5.07e-19!101;UBERON:0003081!5.59e-15!216;UBERON:0000178!6.61e-15!15;UBERON:0000179!6.61e-15!15;UBERON:0000463!6.61e-15!15;UBERON:0002619!3.84e-11!22;UBERON:0001950!1.40e-10!20;UBERON:0000956!1.68e-09!25;UBERON:0000203!1.68e-09!25;UBERON:0001869!2.71e-09!32;UBERON:0001893!1.47e-08!34;UBERON:0002020!1.69e-08!34;UBERON:0003528!1.69e-08!34;UBERON:0000200!3.19e-08!6;UBERON:0002204!4.07e-08!167;UBERON:0002050!1.06e-07!605;UBERON:0005423!1.06e-07!605;UBERON:0002791!1.16e-07!33;UBERON:0006947!2.08e-07!3;UBERON:0004054!2.08e-07!3;UBERON:0000922!2.35e-07!612;UBERON:0000923!3.03e-07!604;UBERON:0005291!3.03e-07!604;UBERON:0006598!3.03e-07!604;UBERON:0002532!3.03e-07!604;UBERON:0001049!7.00e-07!57;UBERON:0005068!7.00e-07!57;UBERON:0006241!7.00e-07!57;UBERON:0007135!7.00e-07!57;UBERON:0000467!9.48e-07!625|ontology_enrichment_uberon_v019=UBERON:0000178;3.28e-17;15!UBERON:0000179;3.28e-17;15!UBERON:0000463;3.28e-17;15!UBERON:0006947;5.41e-11;3!UBERON:0004054;5.41e-11;3!UBERON:0002390;1.71e-09;32!UBERON:0001000;3.87e-09;1!UBERON:0005352;3.87e-09;1!UBERON:0001301;1.32e-08;1!UBERON:0005904;1.85e-08;4!UBERON:0002193;8.14e-07;42|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.12e-29,98;UBERON:0003061,2.12e-29,98;UBERON:0002193,2.33e-26,108;UBERON:0000178,3.69e-17,15;UBERON:0000179,3.69e-17,15;UBERON:0000463,3.69e-17,15;UBERON:0002371,1.51e-16,76;UBERON:0003081,2.82e-15,203;UBERON:0001474,3.66e-15,82;UBERON:0002405,4.01e-15,93;UBERON:0004765,1.34e-13,90;UBERON:0001434,5.40e-12,100;UBERON:0006947,3.81e-11,3;UBERON:0004054,3.81e-11,3;UBERON:0000926,1.91e-09,315;UBERON:0004120,1.91e-09,315;UBERON:0006603,1.91e-09,315;UBERON:0001000,3.87e-09,1;UBERON:0005352,3.87e-09,1;UBERON:0001301,7.75e-09,1;UBERON:0005904,1.42e-08,4;UBERON:0007023,4.06e-07,114|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0.553995408531877,1.60435557976113,0.217010870715852,0.223915474239924,0,0,3.05336301437086,1.51150377475524,0.727752183563449,0.464858073811369,0,0,0.575384784644301,0.512321413058201,0,2.41321976515633,0.645484683583826,1.35426486594342,0.941211697713023,0,0.224723484445085,0.612167784741805,0.320929027076094,0.639337125799041,0,0.199463657621632,0.852449501065388,0,0,0,0.502497330513487,0,0.868755378820466,0.605399502633369,0.368277635987565,0.632924774881769,1.26753171787165,2.33864729961548,3.77385561915077,2.2465726229299,3.00353785683013,1.76798145366788,3.70516566863623,4.17725022118089,2.37463399894024,0,0,0,0.426730222566507,0,0,0.661044872784862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127986611154418,1.24930726552346,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261958150995425,0,0,0.324547393654683,0.348259474598534,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=57864 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16055 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=16bp_to_ENST00000491462_5end | |||
|coexpression_cluster_id=C4790 | |||
|description=CAGE_peak_4_at_SLC46A2_5end | |||
|id=chr9:115653061..115653073,- | |||
|ontology_enrichment_celltype=CL:0002057!2.53e-47!42;CL:0000860!1.92e-43!45;CL:0002194!4.43e-35!63;CL:0000576!4.43e-35!63;CL:0000040!4.43e-35!63;CL:0000559!4.43e-35!63;CL:0002009!1.16e-33!65;CL:0000839!1.79e-30!70;CL:0000557!6.86e-30!71;CL:0000766!8.12e-29!76;CL:0002087!5.12e-20!119;CL:0002393!3.56e-19!9;CL:0002397!3.56e-19!9;CL:0002031!1.30e-16!124;CL:0000738!3.94e-16!140;CL:0000763!4.83e-16!112;CL:0000049!4.83e-16!112;CL:0000037!5.79e-11!172;CL:0000566!5.79e-11!172;CL:0002032!1.89e-10!165;CL:0000837!1.89e-10!165;CL:0000988!9.41e-10!182;CL:0000875!5.59e-08!3;CL:0002396!5.59e-08!3 | |||
|ontology_enrichment_celltype_v019=CL:0000875;7.55e-24;3!CL:0002396;7.55e-24;3!CL:0002393;3.84e-20;6!CL:0002397;3.84e-20;6!CL:0000576;5.70e-16;48!CL:0000766;4.34e-12;69!CL:0000860;1.12e-09;33!CL:0002057;1.12e-09;33!CL:0000473;1.30e-07;39!CL:0000234;1.30e-07;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0002393,1.83e-40,9;CL:0002397,1.83e-40,9;CL:0000860,1.66e-32,42;CL:0002057,1.66e-32,42;CL:0000473,4.03e-28,48;CL:0000234,4.03e-28,48;CL:0000875,7.29e-24,3;CL:0002396,7.29e-24,3;CL:0002194,5.60e-22,59;CL:0000576,5.60e-22,59;CL:0000040,5.60e-22,59;CL:0000559,5.60e-22,59;CL:0002009,3.48e-21,61;CL:0000839,2.08e-19,66;CL:0000557,4.38e-19,67;CL:0000766,1.34e-17,72;CL:0002087,9.92e-12,115;CL:0002031,3.96e-11,120;CL:0000763,6.38e-11,108;CL:0000049,6.38e-11,108;CL:0000738,1.69e-09,136;CL:0002032,1.33e-07,161;CL:0000837,1.33e-07,161;CL:0000037,3.59e-07,168 | |||
|ontology_enrichment_development_v019=CL:0002057;2.23e-22;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!4.62e-41!102;UBERON:0003061!4.62e-41!102;UBERON:0002193!2.56e-39!112;UBERON:0007023!8.95e-32!115;UBERON:0002371!2.67e-25!80;UBERON:0001474!8.85e-23!86;UBERON:0002405!5.73e-21!115;UBERON:0004765!5.07e-19!101;UBERON:0001434!5.07e-19!101;UBERON:0003081!5.59e-15!216;UBERON:0000178!6.61e-15!15;UBERON:0000179!6.61e-15!15;UBERON:0000463!6.61e-15!15;UBERON:0002619!3.84e-11!22;UBERON:0001950!1.40e-10!20;UBERON:0000956!1.68e-09!25;UBERON:0000203!1.68e-09!25;UBERON:0001869!2.71e-09!32;UBERON:0001893!1.47e-08!34;UBERON:0002020!1.69e-08!34;UBERON:0003528!1.69e-08!34;UBERON:0000200!3.19e-08!6;UBERON:0002204!4.07e-08!167;UBERON:0002050!1.06e-07!605;UBERON:0005423!1.06e-07!605;UBERON:0002791!1.16e-07!33;UBERON:0006947!2.08e-07!3;UBERON:0004054!2.08e-07!3;UBERON:0000922!2.35e-07!612;UBERON:0000923!3.03e-07!604;UBERON:0005291!3.03e-07!604;UBERON:0006598!3.03e-07!604;UBERON:0002532!3.03e-07!604;UBERON:0001049!7.00e-07!57;UBERON:0005068!7.00e-07!57;UBERON:0006241!7.00e-07!57;UBERON:0007135!7.00e-07!57;UBERON:0000467!9.48e-07!625 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;3.28e-17;15!UBERON:0000179;3.28e-17;15!UBERON:0000463;3.28e-17;15!UBERON:0006947;5.41e-11;3!UBERON:0004054;5.41e-11;3!UBERON:0002390;1.71e-09;32!UBERON:0001000;3.87e-09;1!UBERON:0005352;3.87e-09;1!UBERON:0001301;1.32e-08;1!UBERON:0005904;1.85e-08;4!UBERON:0002193;8.14e-07;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.12e-29,98;UBERON:0003061,2.12e-29,98;UBERON:0002193,2.33e-26,108;UBERON:0000178,3.69e-17,15;UBERON:0000179,3.69e-17,15;UBERON:0000463,3.69e-17,15;UBERON:0002371,1.51e-16,76;UBERON:0003081,2.82e-15,203;UBERON:0001474,3.66e-15,82;UBERON:0002405,4.01e-15,93;UBERON:0004765,1.34e-13,90;UBERON:0001434,5.40e-12,100;UBERON:0006947,3.81e-11,3;UBERON:0004054,3.81e-11,3;UBERON:0000926,1.91e-09,315;UBERON:0004120,1.91e-09,315;UBERON:0006603,1.91e-09,315;UBERON:0001000,3.87e-09,1;UBERON:0005352,3.87e-09,1;UBERON:0001301,7.75e-09,1;UBERON:0005904,1.42e-08,4;UBERON:0007023,4.06e-07,114 | |||
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|short_description=p4@SLC46A2 | |||
}} |
Revision as of 07:01, 14 September 2013
Short description: | p4@SLC46A2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_SLC46A2_5end |
Coexpression cluster: | C4790_CD14_ductus_CD14CD16_blood_lung_Whole_thymus |
Association with transcript: | 16bp_to_ENST00000491462_5end |
EntrezGene: | SLC46A2 |
HGNC: | 16055 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intermediate monocyte | 1.83e-40 | 9 |
CD14-positive, CD16-positive monocyte | 1.83e-40 | 9 |
classical monocyte | 1.66e-32 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.66e-32 | 42 |
defensive cell | 4.03e-28 | 48 |
phagocyte | 4.03e-28 | 48 |
non-classical monocyte | 7.29e-24 | 3 |
CD14-low, CD16-positive monocyte | 7.29e-24 | 3 |
monopoietic cell | 5.60e-22 | 59 |
monocyte | 5.60e-22 | 59 |
monoblast | 5.60e-22 | 59 |
promonocyte | 5.60e-22 | 59 |
macrophage dendritic cell progenitor | 3.48e-21 | 61 |
myeloid lineage restricted progenitor cell | 2.08e-19 | 66 |
granulocyte monocyte progenitor cell | 4.38e-19 | 67 |
myeloid leukocyte | 1.34e-17 | 72 |
nongranular leukocyte | 9.92e-12 | 115 |
hematopoietic lineage restricted progenitor cell | 3.96e-11 | 120 |
myeloid cell | 6.38e-11 | 108 |
common myeloid progenitor | 6.38e-11 | 108 |
leukocyte | 1.69e-09 | 136 |
hematopoietic oligopotent progenitor cell | 1.33e-07 | 161 |
hematopoietic multipotent progenitor cell | 1.33e-07 | 161 |
hematopoietic stem cell | 3.59e-07 | 168 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.12e-29 | 98 |
blood island | 2.12e-29 | 98 |
hemolymphoid system | 2.33e-26 | 108 |
blood | 3.69e-17 | 15 |
haemolymphatic fluid | 3.69e-17 | 15 |
organism substance | 3.69e-17 | 15 |
bone marrow | 1.51e-16 | 76 |
lateral plate mesoderm | 2.82e-15 | 203 |
bone element | 3.66e-15 | 82 |
immune system | 4.01e-15 | 93 |
skeletal element | 1.34e-13 | 90 |
skeletal system | 5.40e-12 | 100 |
male genital duct | 3.81e-11 | 3 |
internal male genitalia | 3.81e-11 | 3 |
mesoderm | 1.91e-09 | 315 |
mesoderm-derived structure | 1.91e-09 | 315 |
presumptive mesoderm | 1.91e-09 | 315 |
vas deferens | 3.87e-09 | 1 |
spermatic cord | 3.87e-09 | 1 |
epididymis | 7.75e-09 | 1 |
duct of male reproductive system | 1.42e-08 | 4 |
adult organism | 4.06e-07 | 114 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.