FFCP PHASE1:Hg19::chr9:112191317..112191328,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=5774|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding|HGNC=9655|TSSclassifier=S|UniProt=B7Z3V3,P26045,Q8N4S3,B7ZA03|association_with_transcript=0bp_to_NM_001145371,NM_001145372,uc011lwe.1,uc011lwf.1_5end|coexpression_cluster_id=C20|description=CAGE_peak_7_at_PTPN3_5end|id=chr9:112191317..112191328,-|ontology_enrichment_celltype=CL:0002127!1.41e-14!1;CL:0000914!1.41e-14!1;CL:0000911!1.41e-14!1;CL:0000814!1.41e-14!1;CL:0002042!1.41e-14!1;CL:0002039!1.41e-14!1;CL:0002040!1.41e-14!1;CL:0002041!1.41e-14!1;CL:0000893!6.15e-08!2;CL:0002489!6.15e-08!2;CL:0000809!6.15e-08!2;CL:0000808!6.15e-08!2;CL:0000894!6.15e-08!2;CL:0000806!6.15e-08!2;CL:0000807!6.15e-08!2;CL:0000805!6.15e-08!2;CL:0002425!6.15e-08!2|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0010226;2.58e-34;1!UBERON:0000358;7.06e-34;1!UBERON:0005062;1.70e-09;4!UBERON:0007284;1.70e-09;4|ontology_enrichment_disease=DOID:114!3.60e-28!2;DOID:178!6.22e-15!1;DOID:326!6.22e-15!1;DOID:3978!6.22e-15!1;DOID:3394!6.22e-15!1;DOID:5844!6.22e-15!1;DOID:1287!1.32e-14!4|ontology_enrichment_disease_v019=DOID:114;1.04e-66;2!DOID:178;3.61e-34;1!DOID:326;3.61e-34;1!DOID:3978;3.61e-34;1!DOID:3394;3.61e-34;1!DOID:5844;3.61e-34;1!DOID:1287;5.06e-34;4|ontology_enrichment_disease_v019_2=DOID:114,1.04e-66,2;DOID:178,3.61e-34,1;DOID:326,3.61e-34,1;DOID:3978,3.61e-34,1;DOID:3394,3.61e-34,1;DOID:5844,3.61e-34,1;DOID:1287,5.06e-34,4|ontology_enrichment_uberon=UBERON:0001897!3.58e-27!2;UBERON:0007100!1.21e-17!27;UBERON:0001894!1.84e-17!7;UBERON:0006222!1.84e-17!7;UBERON:0002084!5.42e-15!1;UBERON:0002082!5.42e-15!1;UBERON:0004706!5.42e-15!1;UBERON:0002146!9.36e-15!1;UBERON:0005623!9.36e-15!1;UBERON:0002336!1.23e-14!1;UBERON:0001018!1.23e-14!1;UBERON:0002473!1.23e-14!1;UBERON:0005340!1.23e-14!1;UBERON:0002316!1.23e-14!1;UBERON:0003544!1.23e-14!1;UBERON:0001020!1.23e-14!1;UBERON:0005970!1.23e-14!1;UBERON:0002437!1.23e-14!1;UBERON:0003103!5.57e-09!69;UBERON:0007023!1.90e-08!115;UBERON:0005162!5.74e-08!2;UBERON:0000122!5.74e-08!2;UBERON:0003127!6.58e-08!2|ontology_enrichment_uberon_v019=UBERON:0002084;2.58e-34;1!UBERON:0002082;2.58e-34;1!UBERON:0002146;9.85e-34;1!UBERON:0005623;9.85e-34;1!UBERON:0007100;2.56e-33;25!UBERON:0004151;2.07e-12;3!UBERON:0003978;3.24e-12;3!UBERON:0000946;3.24e-12;3!UBERON:0000948;5.57e-07;22|ontology_enrichment_uberon_v019_2=UBERON:0002084,2.58e-34,1;UBERON:0002082,2.58e-34,1;UBERON:0010226,2.58e-34,1;UBERON:0002146,9.85e-34,1;UBERON:0005623,9.85e-34,1;UBERON:0007100,6.67e-31,27;UBERON:0003103,1.30e-12,68;UBERON:0004151,2.07e-12,3;UBERON:0003978,3.24e-12,3;UBERON:0009751,3.24e-12,3;UBERON:0000946,3.24e-12,3;UBERON:0002523,3.24e-12,3;UBERON:0005983,3.24e-12,3;UBERON:0002165,3.24e-12,3;UBERON:0002062,3.24e-12,3;UBERON:0007280,3.24e-12,3;UBERON:0001009,8.07e-08,112;UBERON:0007023,1.09e-07,114|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560425719967636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.328014645699706,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.741412462787447,0,0.234264445725339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.60412296808179,0,6.38972801596772,18.4567200698725,5.80245789348869,0.134366944973453,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.28301167401975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.829169439458779,0.103432995861895,0,0,0,0,0,0,0,0,0,0,0,0.332660356546013,0,0,0,0,2.34640942403454,0,0,0,0,0|short_description=p7@PTPN3}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=5774 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=9655 | |||
|TSSclassifier=S | |||
|UniProt=B7Z3V3,P26045,Q8N4S3,B7ZA03 | |||
|association_with_transcript=0bp_to_NM_001145371,NM_001145372,uc011lwe.1,uc011lwf.1_5end | |||
|coexpression_cluster_id=C20 | |||
|description=CAGE_peak_7_at_PTPN3_5end | |||
|id=chr9:112191317..112191328,- | |||
|ontology_enrichment_celltype=CL:0002127!1.41e-14!1;CL:0000914!1.41e-14!1;CL:0000911!1.41e-14!1;CL:0000814!1.41e-14!1;CL:0002042!1.41e-14!1;CL:0002039!1.41e-14!1;CL:0002040!1.41e-14!1;CL:0002041!1.41e-14!1;CL:0000893!6.15e-08!2;CL:0002489!6.15e-08!2;CL:0000809!6.15e-08!2;CL:0000808!6.15e-08!2;CL:0000894!6.15e-08!2;CL:0000806!6.15e-08!2;CL:0000807!6.15e-08!2;CL:0000805!6.15e-08!2;CL:0002425!6.15e-08!2 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0010226;2.58e-34;1!UBERON:0000358;7.06e-34;1!UBERON:0005062;1.70e-09;4!UBERON:0007284;1.70e-09;4 | |||
|ontology_enrichment_disease=DOID:114!3.60e-28!2;DOID:178!6.22e-15!1;DOID:326!6.22e-15!1;DOID:3978!6.22e-15!1;DOID:3394!6.22e-15!1;DOID:5844!6.22e-15!1;DOID:1287!1.32e-14!4 | |||
|ontology_enrichment_disease_v019=DOID:114;1.04e-66;2!DOID:178;3.61e-34;1!DOID:326;3.61e-34;1!DOID:3978;3.61e-34;1!DOID:3394;3.61e-34;1!DOID:5844;3.61e-34;1!DOID:1287;5.06e-34;4 | |||
|ontology_enrichment_disease_v019_2=DOID:114,1.04e-66,2;DOID:178,3.61e-34,1;DOID:326,3.61e-34,1;DOID:3978,3.61e-34,1;DOID:3394,3.61e-34,1;DOID:5844,3.61e-34,1;DOID:1287,5.06e-34,4 | |||
|ontology_enrichment_uberon=UBERON:0001897!3.58e-27!2;UBERON:0007100!1.21e-17!27;UBERON:0001894!1.84e-17!7;UBERON:0006222!1.84e-17!7;UBERON:0002084!5.42e-15!1;UBERON:0002082!5.42e-15!1;UBERON:0004706!5.42e-15!1;UBERON:0002146!9.36e-15!1;UBERON:0005623!9.36e-15!1;UBERON:0002336!1.23e-14!1;UBERON:0001018!1.23e-14!1;UBERON:0002473!1.23e-14!1;UBERON:0005340!1.23e-14!1;UBERON:0002316!1.23e-14!1;UBERON:0003544!1.23e-14!1;UBERON:0001020!1.23e-14!1;UBERON:0005970!1.23e-14!1;UBERON:0002437!1.23e-14!1;UBERON:0003103!5.57e-09!69;UBERON:0007023!1.90e-08!115;UBERON:0005162!5.74e-08!2;UBERON:0000122!5.74e-08!2;UBERON:0003127!6.58e-08!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0002084;2.58e-34;1!UBERON:0002082;2.58e-34;1!UBERON:0002146;9.85e-34;1!UBERON:0005623;9.85e-34;1!UBERON:0007100;2.56e-33;25!UBERON:0004151;2.07e-12;3!UBERON:0003978;3.24e-12;3!UBERON:0000946;3.24e-12;3!UBERON:0000948;5.57e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002084,2.58e-34,1;UBERON:0002082,2.58e-34,1;UBERON:0010226,2.58e-34,1;UBERON:0002146,9.85e-34,1;UBERON:0005623,9.85e-34,1;UBERON:0007100,6.67e-31,27;UBERON:0003103,1.30e-12,68;UBERON:0004151,2.07e-12,3;UBERON:0003978,3.24e-12,3;UBERON:0009751,3.24e-12,3;UBERON:0000946,3.24e-12,3;UBERON:0002523,3.24e-12,3;UBERON:0005983,3.24e-12,3;UBERON:0002165,3.24e-12,3;UBERON:0002062,3.24e-12,3;UBERON:0007280,3.24e-12,3;UBERON:0001009,8.07e-08,112;UBERON:0007023,1.09e-07,114 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560425719967636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.328014645699706,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.741412462787447,0,0.234264445725339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.60412296808179,0,6.38972801596772,18.4567200698725,5.80245789348869,0.134366944973453,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.28301167401975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.829169439458779,0.103432995861895,0,0,0,0,0,0,0,0,0,0,0,0.332660356546013,0,0,0,0,2.34640942403454,0,0,0,0,0 | |||
|short_description=p7@PTPN3 | |||
}} |
Revision as of 06:53, 14 September 2013
Short description: | p7@PTPN3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_PTPN3_5end |
Coexpression cluster: | C20_heart_left_skeletal_diaphragm_tongue_umbilical_throat |
Association with transcript: | 0bp_to_NM_001145371, NM_001145372, uc011lwe.1, uc011lwf.1_5end |
EntrezGene: | PTPN3 |
HGNC: | 9655 |
UniProt: | B7Z3V3P26045Q8N4S3B7ZA03 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
heart left ventricle | 2.58e-34 | 1 |
cardiac ventricle | 2.58e-34 | 1 |
future cardiac ventricle | 2.58e-34 | 1 |
pulmonary valve | 9.85e-34 | 1 |
semi-lunar valve | 9.85e-34 | 1 |
primary circulatory organ | 6.67e-31 | 27 |
compound organ | 1.30e-12 | 68 |
cardiac chamber | 2.07e-12 | 3 |
valve | 3.24e-12 | 3 |
cardiac mesenchyme | 3.24e-12 | 3 |
cardial valve | 3.24e-12 | 3 |
tunica intima | 3.24e-12 | 3 |
heart layer | 3.24e-12 | 3 |
endocardium | 3.24e-12 | 3 |
endocardial cushion | 3.24e-12 | 3 |
presumptive endocardium | 3.24e-12 | 3 |
circulatory system | 8.07e-08 | 112 |
adult organism | 1.09e-07 | 114 |
Ontology term | p-value | n |
---|---|---|
heart disease | 1.04e-66 | 2 |
vascular disease | 3.61e-34 | 1 |
ischemia | 3.61e-34 | 1 |
extrinsic cardiomyopathy | 3.61e-34 | 1 |
myocardial ischemia | 3.61e-34 | 1 |
myocardial infarction | 3.61e-34 | 1 |
cardiovascular system disease | 5.06e-34 | 4 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.