FFCP PHASE1:Mm9::chr5:136410460..136410483,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=22628|HGNC=|MCL_coexpression_id=13|UniProt=P61982|association_with_transcript=0bp_to_ENSMUST00000055808,ENSMUST00000129581_5end|description=CAGE_peak_1_at_Ywhag_5end|id=chr5:136410460..136410483,-|ontology_enrichment_celltype=CL:0000055!1.87e-16!50;CL:0002319!2.71e-16!43;CL:0000221!1.64e-15!44;CL:0000133!1.64e-15!44;CL:0000393!1.54e-14!39;CL:0000211!1.54e-14!39;CL:0000117!2.16e-14!23;CL:0000337!2.16e-14!23;CL:0000540!1.09e-13!33;CL:0000047!1.09e-13!33;CL:0000031!1.09e-13!33;CL:0000404!1.09e-13!33;CL:0002321!3.76e-07!70;CL:0000220!3.76e-07!70|ontology_enrichment_celltype_v019_2=CL:0002319,2.71e-16,43;CL:0000221,1.64e-15,44;CL:0000133,1.64e-15,44;CL:0000393,1.54e-14,39;CL:0000211,1.54e-14,39;CL:0000117,2.16e-14,23;CL:0000337,2.16e-14,23;CL:0000540,1.09e-13,33;CL:0000047,1.09e-13,33;CL:0000031,1.09e-13,33;CL:0000404,1.09e-13,33;CL:0002321,3.76e-07,70|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!1.21e-29!75;UBERON:0001016!1.21e-29!75;UBERON:0001017!1.27e-28!73;UBERON:0005743!1.27e-28!73;UBERON:0004121!1.47e-27!102;UBERON:0000924!1.47e-27!102;UBERON:0006601!1.47e-27!102;UBERON:0002346!2.26e-24!71;UBERON:0003075!2.26e-24!71;UBERON:0007284!2.26e-24!71;UBERON:0001049!4.02e-23!52;UBERON:0005068!4.02e-23!52;UBERON:0006241!4.02e-23!52;UBERON:0007135!4.02e-23!52;UBERON:0000955!3.58e-21!50;UBERON:0006238!3.58e-21!50;UBERON:0002616!1.09e-20!49;UBERON:0002020!2.36e-20!34;UBERON:0000033!9.68e-18!63;UBERON:0002791!7.59e-17!29;UBERON:0003528!7.59e-17!29;UBERON:0001893!7.59e-17!29;UBERON:0003080!2.33e-16!40;UBERON:0002780!8.95e-16!39;UBERON:0001890!8.95e-16!39;UBERON:0006240!8.95e-16!39;UBERON:0003056!1.88e-15!49;UBERON:0000956!3.37e-12!21;UBERON:0001869!3.37e-12!21;UBERON:0000203!3.37e-12!21;UBERON:0000025!1.11e-10!114;UBERON:0002619!2.68e-10!17;UBERON:0004111!4.53e-09!122;UBERON:0003076!1.80e-07!12;UBERON:0003057!1.80e-07!12;UBERON:0002021!2.52e-07!10;UBERON:0000411!2.52e-07!10;UBERON:0001950!2.52e-07!10;UBERON:0007811!4.71e-07!86|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.21e-29,75;UBERON:0001017,1.27e-28,73;UBERON:0004121,2.01e-25,95;UBERON:0000924,2.01e-25,95;UBERON:0006601,2.01e-25,95;UBERON:0000073,2.79e-24,54;UBERON:0010314,3.01e-23,92;UBERON:0001049,4.02e-23,52;UBERON:0005068,4.02e-23,52;UBERON:0006241,4.02e-23,52;UBERON:0007135,4.02e-23,52;UBERON:0002346,1.35e-22,64;UBERON:0003075,1.35e-22,64;UBERON:0007284,1.35e-22,64;UBERON:0002020,2.36e-20,34;UBERON:0000955,2.53e-19,47;UBERON:0006238,2.53e-19,47;UBERON:0002616,7.57e-19,46;UBERON:0010371,1.49e-18,73;UBERON:0003528,7.59e-17,29;UBERON:0002791,7.59e-17,29;UBERON:0001893,7.59e-17,29;UBERON:0003080,2.33e-16,40;UBERON:0002780,8.95e-16,39;UBERON:0001890,8.95e-16,39;UBERON:0006240,8.95e-16,39;UBERON:0003056,1.88e-15,49;UBERON:0000956,3.37e-12,21;UBERON:0001869,3.37e-12,21;UBERON:0000203,3.37e-12,21;UBERON:0000025,1.11e-10,114;UBERON:0002619,2.68e-10,17;UBERON:0004111,4.53e-09,122;UBERON:0003076,1.80e-07,12;UBERON:0003057,1.80e-07,12;UBERON:0002021,2.52e-07,10;UBERON:0000411,2.52e-07,10;UBERON:0001950,2.52e-07,10|phase1_expression=56.5325430279923,32.4547129104606,40.4949323056687,14.215817931421,14.5259761684441,54.2250048275404,46.7225281191051,31.6352142431862,126.569061214348,137.39587695101,77.3905216379282,88.0684635308514,30.4737299277546,29.7229368224591,49.6333545105337,35.2306965258297,26.5833513688696,48.5811734651686,50.4581115669119,56.01943403734,122.122164656936,87.5746189591808,79.4047358982364,49.5976510659561,48.63476758624,34.4539178469012,48.2453435698164,50.6357396811839,17.6721780094428,27.2192540140725,53.2153225572731,125.101042671547,139.004641994113,47.5445043046316,22.2415747208481,31.9170519088305,24.0919840389596,67.3835925486421,64.8508335954754,45.5465657257204,74.7053989799388,82.6485036799719,58.7467527167696,151.957459296522,155.106704765857,191.255715752472,130.659354506123,178.780628231966,223.640534023692,191.319020689095,132.427154857593,156.690295157819,51.1736948476096,36.9934692425786,39.9951620979532,161.044406958503,105.444305897462,184.094936943047,505.184202766416,464.983070780117,481.711866664696,209.405920818724,152.069410135005,209.226684267925,168.107281636386,191.829631035447,197.13687272111,164.061216372304,305.676977085392,313.213776929522,327.896614746805,604.723133982852,583.534685194163,298.877550084488,286.865494757581,349.303138911808,309.425625608282,524.539584853951,511.048936143522,522.005926836107,502.267163377229,464.133813166073,574.558611944842,487.915182897466,479.939296266961,488.788823300815,549.269944522939,526.019236118998,220.666127372898,208.577505894728,39.1317059747265,59.3692475117157,205.351342779741,72.8599308711053,84.470934268197,64.067844854919,141.848864333069,92.8845258050415,79.7543034130807,89.3949123511161,64.787973097273,82.1289455451634,78.9896243090602,56.8853362522665,124.265857540437,136.307607625603,147.613137944317,88.0357712633952,80.5296818142704,196.092065704634,131.501877688731,164.715823766868,169.963621477715,175.441153603253,125.702327928068,185.98655516792,197.755974187499,391.285859825281,94.6533290586365,132.648816956876,125.658824003964,98.4296763864501,41.0061874679869,197.334257185783,221.804062515449,42.1504141094176,73.0872259486114,60.5901758303342,60.4854280867788,480.977743128886,286.852877967279,388.774565437203,431.605787037422,464.634985969211,435.939317485957,398.464542094413,57.1318831200274,66.93095018823,28.0522261861379,133.630578487911,112.814424048664,136.331947929049,144.229765974085,124.783589167972,98.7209602685767,102.619089948165,108.038088417367,111.242449417777,115.544444212003,95.8767826450844,80.9375171154165,85.9247271116093,73.4044737955578,78.3567374674875,78.6087761078344,75.4339871242089,58.9859077343117,58.1606270079256,82.6915783241175,118.475941890307,102.956940331701,100.654692356707,109.139323104782,107.433270534082,96.262678441724,104.407741192933,112.138281785041,83.2536891077918,122.103408635802,140.855684179864,155.571045518497,157.018786494807,168.175388312945,133.40118024781,401.653801757483,377.762832044353,26.7639214216876,56.3279706993349,104.084666261194,103.345318977895,90.3360903867874,60.5050573870028,68.2700594603752,54.9752059465296,49.8255514621737,45.621610458551,44.737667166448,37.8017296878187,47.7662013441844,48.536248067328,45.3889904736858,37.6377006450754,86.2988949336522,85.9148814825161,74.3871055442331,68.019543500335,60.3192235091316,41.9412202944105,41.6728779648856,38.0834181787374,40.3486730552333,38.2531208157582,112.059093038942,83.0888626466148,85.1100448840169,82.974119470011,68.3638609079255,66.8060732514195,71.2952384987975,93.7889408089643,89.6607804065946,81.2701783036721,161.020391310637,81.8710084870707,68.3362504120888,69.2066125575086,77.4996826414661,75.7436328540486,71.3147314043094,97.7775684735701,81.3195232445709,72.3114065402302,60.0807035618565,72.8652219871899,90.9326708184573,83.7123349309957,74.8766934504407,64.003295308496,83.3948440078658,74.3939448809451,89.9688755521316,66.2492688303323,82.9352061665997,149.574063050145,94.910504692674,87.7478853249049,546.674758908432,540.814721936425,155.902133053218,286.302031449759,150.181912442138,152.271110275689,160.921278106401,126.4144941169,145.264735501721,148.615178664137,129.134613834291,176.230282320521,167.602017849326,242.597593898464,110.145506121616,79.4172592355958,55.0557922615087,70.2772723863001,46.460798418987,80.1176099311439,82.8366546083418,64.1257271170054,94.2013038289665,74.0918706544865,70.5509240349244,49.8041209384183,65.239020244404,66.3677191665214,59.0344208019993,50.5364161916116,112.004630292996,96.5127464007823,122.502673542269,104.596473095417,90.6208593912018,112.907461542111,122.753569369182,109.607381681256,146.904489247883,115.236646549918,71.8922577659176,96.7882304766488,77.3414603873388,98.6116322575348,74.0108532819446,69.2674596924159,44.888048840997,591.321288111515,61.0009044448334,83.1739077891787,69.4479477636419,47.2804827081774,50.0300873458952,56.7369869552176,87.7088698768293,84.8105801081367,82.505384361241,69.6909551151033,108.66141379512,87.4273708645449,82.7320910694998,86.7716428460045,85.3797624247554,79.704828713429,78.3554760276185,74.6004434654484,63.3817219396867,32.3096442805201,32.694190443683,89.7099276263873,78.4273244766643,72.9191956290179,84.8580040248693,87.8571852552046,53.6322580611096,69.6593458915133,68.6828705988406,44.9346464736371,57.894031257831,50.8777904211367,93.861774679346,75.492553516148,61.7123909144526,60.6900498312762,57.021548822223,36.9000030026304,43.2730314621511,33.9247271825776,34.5978902213699,37.8098194263152,42.3941781217923,38.5809484977721,30.7386252737526,148.281670884348,165.379535263678,148.117577262244,189.877501107773,102.583674431093,102.286949120894,87.3633247754854,128.62102744744,48.1509219873949,557.410068663045,561.136463302249,524.772290310487,548.211651676363,486.408589037156,431.329915409519,485.341177666668,428.705785469458,481.690380750209,468.573082135397,167.408991653277,125.293810247924,134.367347728504,124.713745856035,163.707880012454,189.542657211965,157.350683283544,164.828045791115,170.087181083662,180.678506411115,176.421592723607,169.009201881924,155.819468429884,172.547785731123,167.998746695169,165.273910875227,181.243085777754,184.999942424693,142.993807578747,167.217973272675,148.462386282885,146.062588469135,167.143769153072,160.607790378723,168.738119084688,173.206102354262,169.57423085306,166.260057628717,153.59445275967,217.723201403202,192.900539469907,169.427709685969,129.726240684792,170.430525304563,130.597775634233,241.317018288056,165.389647170904,134.294408780186,149.204899013698,161.472918795485,175.523951564659|short_description=p1@Ywhag}} | ||
|EntrezGene=22628 | |||
|HGNC= | |||
|MCL_coexpression_id=13 | |||
|UniProt=P61982 | |||
|association_with_transcript=0bp_to_ENSMUST00000055808,ENSMUST00000129581_5end | |||
|description=CAGE_peak_1_at_Ywhag_5end | |||
|id=chr5:136410460..136410483,- | |||
|ontology_enrichment_celltype=CL:0000055!1.87e-16!50;CL:0002319!2.71e-16!43;CL:0000221!1.64e-15!44;CL:0000133!1.64e-15!44;CL:0000393!1.54e-14!39;CL:0000211!1.54e-14!39;CL:0000117!2.16e-14!23;CL:0000337!2.16e-14!23;CL:0000540!1.09e-13!33;CL:0000047!1.09e-13!33;CL:0000031!1.09e-13!33;CL:0000404!1.09e-13!33;CL:0002321!3.76e-07!70;CL:0000220!3.76e-07!70 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,2.71e-16,43;CL:0000221,1.64e-15,44;CL:0000133,1.64e-15,44;CL:0000393,1.54e-14,39;CL:0000211,1.54e-14,39;CL:0000117,2.16e-14,23;CL:0000337,2.16e-14,23;CL:0000540,1.09e-13,33;CL:0000047,1.09e-13,33;CL:0000031,1.09e-13,33;CL:0000404,1.09e-13,33;CL:0002321,3.76e-07,70 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.21e-29!75;UBERON:0001016!1.21e-29!75;UBERON:0001017!1.27e-28!73;UBERON:0005743!1.27e-28!73;UBERON:0004121!1.47e-27!102;UBERON:0000924!1.47e-27!102;UBERON:0006601!1.47e-27!102;UBERON:0002346!2.26e-24!71;UBERON:0003075!2.26e-24!71;UBERON:0007284!2.26e-24!71;UBERON:0001049!4.02e-23!52;UBERON:0005068!4.02e-23!52;UBERON:0006241!4.02e-23!52;UBERON:0007135!4.02e-23!52;UBERON:0000955!3.58e-21!50;UBERON:0006238!3.58e-21!50;UBERON:0002616!1.09e-20!49;UBERON:0002020!2.36e-20!34;UBERON:0000033!9.68e-18!63;UBERON:0002791!7.59e-17!29;UBERON:0003528!7.59e-17!29;UBERON:0001893!7.59e-17!29;UBERON:0003080!2.33e-16!40;UBERON:0002780!8.95e-16!39;UBERON:0001890!8.95e-16!39;UBERON:0006240!8.95e-16!39;UBERON:0003056!1.88e-15!49;UBERON:0000956!3.37e-12!21;UBERON:0001869!3.37e-12!21;UBERON:0000203!3.37e-12!21;UBERON:0000025!1.11e-10!114;UBERON:0002619!2.68e-10!17;UBERON:0004111!4.53e-09!122;UBERON:0003076!1.80e-07!12;UBERON:0003057!1.80e-07!12;UBERON:0002021!2.52e-07!10;UBERON:0000411!2.52e-07!10;UBERON:0001950!2.52e-07!10;UBERON:0007811!4.71e-07!86 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.21e-29,75;UBERON:0001017,1.27e-28,73;UBERON:0004121,2.01e-25,95;UBERON:0000924,2.01e-25,95;UBERON:0006601,2.01e-25,95;UBERON:0000073,2.79e-24,54;UBERON:0010314,3.01e-23,92;UBERON:0001049,4.02e-23,52;UBERON:0005068,4.02e-23,52;UBERON:0006241,4.02e-23,52;UBERON:0007135,4.02e-23,52;UBERON:0002346,1.35e-22,64;UBERON:0003075,1.35e-22,64;UBERON:0007284,1.35e-22,64;UBERON:0002020,2.36e-20,34;UBERON:0000955,2.53e-19,47;UBERON:0006238,2.53e-19,47;UBERON:0002616,7.57e-19,46;UBERON:0010371,1.49e-18,73;UBERON:0003528,7.59e-17,29;UBERON:0002791,7.59e-17,29;UBERON:0001893,7.59e-17,29;UBERON:0003080,2.33e-16,40;UBERON:0002780,8.95e-16,39;UBERON:0001890,8.95e-16,39;UBERON:0006240,8.95e-16,39;UBERON:0003056,1.88e-15,49;UBERON:0000956,3.37e-12,21;UBERON:0001869,3.37e-12,21;UBERON:0000203,3.37e-12,21;UBERON:0000025,1.11e-10,114;UBERON:0002619,2.68e-10,17;UBERON:0004111,4.53e-09,122;UBERON:0003076,1.80e-07,12;UBERON:0003057,1.80e-07,12;UBERON:0002021,2.52e-07,10;UBERON:0000411,2.52e-07,10;UBERON:0001950,2.52e-07,10 | |||
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| |||
|short_description=p1@Ywhag | |||
}} |
Revision as of 06:41, 14 September 2013
Short description: | p1@Ywhag |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Ywhag_5end |
Coexpression cluster: | MCL_coexpression_mm9:13 |
Association with transcript: | 0bp_to_ENSMUST00000055808, ENSMUST00000129581_5end |
EntrezGene: | Ywhag |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 2.71e-16 | 43 |
ectodermal cell | 1.64e-15 | 44 |
neurectodermal cell | 1.64e-15 | 44 |
electrically responsive cell | 1.54e-14 | 39 |
electrically active cell | 1.54e-14 | 39 |
CNS neuron (sensu Vertebrata) | 2.16e-14 | 23 |
neuroblast (sensu Vertebrata) | 2.16e-14 | 23 |
neuron | 1.09e-13 | 33 |
neuronal stem cell | 1.09e-13 | 33 |
neuroblast | 1.09e-13 | 33 |
electrically signaling cell | 1.09e-13 | 33 |
embryonic cell | 3.76e-07 | 70 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.