FFCP PHASE1:Hg19::chr8:99306637..99306693,-: Difference between revisions
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{{FFCP | 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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=79815 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25854 | |||
|TSSclassifier=S | |||
|UniProt=Q9H841,A2RTY8 | |||
|association_with_transcript=-16bp_to_ENST00000341166,NM_024759,uc003yil.1,uc003yim.1_5end | |||
|description=CAGE_peak_3_at_NIPAL2_5end | |||
|id=chr8:99306637..99306693,- | |||
|ontology_enrichment_celltype=CL:0000057!3.54e-09!75 | |||
|ontology_enrichment_celltype_v019=CL:0002334;3.12e-07;12!CL:0002620;6.28e-07;23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,3.41e-10,76;CL:0002620,1.59e-07,23;CL:0002334,5.04e-07,12 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002616!1.46e-13!59;UBERON:0007023!3.28e-13!115;UBERON:0001049!3.43e-11!57;UBERON:0005068!3.43e-11!57;UBERON:0006241!3.43e-11!57;UBERON:0007135!3.43e-11!57;UBERON:0002619!2.49e-10!22;UBERON:0000475!3.53e-10!365;UBERON:0000955!1.19e-09!69;UBERON:0006238!1.19e-09!69;UBERON:0001950!1.45e-09!20;UBERON:0002780!2.51e-09!41;UBERON:0001890!2.51e-09!41;UBERON:0006240!2.51e-09!41;UBERON:0000468!5.76e-09!659;UBERON:0003075!7.44e-09!86;UBERON:0007284!7.44e-09!86;UBERON:0003080!1.13e-08!42;UBERON:0001869!1.14e-08!32;UBERON:0001893!1.32e-08!34;UBERON:0002020!1.55e-08!34;UBERON:0003528!1.55e-08!34;UBERON:0000033!2.60e-08!123;UBERON:0000956!3.01e-08!25;UBERON:0000203!3.01e-08!25;UBERON:0002791!3.45e-08!33;UBERON:0005743!6.88e-08!86;UBERON:0001017!7.55e-08!82;UBERON:0000153!8.47e-08!129;UBERON:0007811!8.47e-08!129;UBERON:0002346!1.07e-07!90;UBERON:0000062!7.15e-07!511;UBERON:0000073!8.37e-07!94;UBERON:0001016!8.37e-07!94 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;7.80e-13;22!UBERON:0001950;1.68e-11;20!UBERON:0000956;1.51e-10;25!UBERON:0000203;1.51e-10;25!UBERON:0001869;4.21e-08;32!UBERON:0001893;2.09e-07;34!UBERON:0003688;3.09e-07;6!UBERON:0002358;3.09e-07;6!UBERON:0003684;3.09e-07;6!UBERON:0001178;3.09e-07;6!UBERON:0002791;4.90e-07;32!UBERON:0003528;5.00e-07;34!UBERON:0002020;5.00e-07;34!UBERON:0004457;8.90e-07;9!UBERON:0000042;8.90e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002619,1.68e-12,22;UBERON:0007023,2.54e-12,114;UBERON:0001950,2.52e-11,20;UBERON:0000955,9.34e-11,68;UBERON:0006238,9.34e-11,68;UBERON:0000073,1.76e-10,53;UBERON:0002616,1.76e-10,53;UBERON:0000956,2.85e-10,25;UBERON:0000203,2.85e-10,25;UBERON:0001049,2.18e-09,56;UBERON:0005068,2.18e-09,56;UBERON:0006241,2.18e-09,56;UBERON:0007135,2.18e-09,56;UBERON:0001869,7.85e-09,32;UBERON:0001017,1.03e-08,81;UBERON:0002780,5.08e-08,41;UBERON:0001890,5.08e-08,41;UBERON:0003080,5.08e-08,41;UBERON:0006240,5.08e-08,41;UBERON:0001893,6.19e-08,34;UBERON:0002791,8.43e-08,32;UBERON:0001016,9.62e-08,89;UBERON:0003528,9.71e-08,34;UBERON:0002020,9.71e-08,34;UBERON:0003688,4.91e-07,6;UBERON:0002358,4.91e-07,6;UBERON:0003684,4.91e-07,6;UBERON:0001178,4.91e-07,6 | |||
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| |||
|short_description=p3@NIPAL2 | |||
}} |
Revision as of 06:32, 14 September 2013
Short description: | p3@NIPAL2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_NIPAL2_5end |
Coexpression cluster: | NA |
Association with transcript: | -16bp_to_ENST00000341166, NM_024759, uc003yil.1, uc003yim.1_5end |
EntrezGene: | NIPAL2 |
HGNC: | 25854 |
UniProt: | Q9H841A2RTY8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 3.41e-10 | 76 |
skin fibroblast | 1.59e-07 | 23 |
preadipocyte | 5.04e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
regional part of cerebral cortex | 1.68e-12 | 22 |
adult organism | 2.54e-12 | 114 |
neocortex | 2.52e-11 | 20 |
brain | 9.34e-11 | 68 |
future brain | 9.34e-11 | 68 |
regional part of nervous system | 1.76e-10 | 53 |
regional part of brain | 1.76e-10 | 53 |
cerebral cortex | 2.85e-10 | 25 |
pallium | 2.85e-10 | 25 |
neural tube | 2.18e-09 | 56 |
neural rod | 2.18e-09 | 56 |
future spinal cord | 2.18e-09 | 56 |
neural keel | 2.18e-09 | 56 |
cerebral hemisphere | 7.85e-09 | 32 |
central nervous system | 1.03e-08 | 81 |
regional part of forebrain | 5.08e-08 | 41 |
forebrain | 5.08e-08 | 41 |
anterior neural tube | 5.08e-08 | 41 |
future forebrain | 5.08e-08 | 41 |
telencephalon | 6.19e-08 | 34 |
regional part of telencephalon | 8.43e-08 | 32 |
nervous system | 9.62e-08 | 89 |
brain grey matter | 9.71e-08 | 34 |
gray matter | 9.71e-08 | 34 |
omentum | 4.91e-07 | 6 |
peritoneum | 4.91e-07 | 6 |
abdominal cavity | 4.91e-07 | 6 |
visceral peritoneum | 4.91e-07 | 6 |
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