FFCP PHASE1:Mm9::chr5:122822239..122822399,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=68948|HGNC=|MCL_coexpression_id=60|UniProt=Q9DB54|association_with_transcript=0bp_to_ENSMUST00000031419_5end|description=CAGE_peak_1_at_1500011H22Rik_5end|id=chr5:122822239..122822399,-|ontology_enrichment_celltype=CL:0000221!6.22e-18!44;CL:0000133!6.22e-18!44;CL:0002319!1.20e-17!43;CL:0000055!1.27e-17!50;CL:0000393!1.35e-15!39;CL:0000211!1.35e-15!39;CL:0000540!7.19e-15!33;CL:0000047!7.19e-15!33;CL:0000031!7.19e-15!33;CL:0000404!7.19e-15!33;CL:0000117!5.90e-14!23;CL:0000337!5.90e-14!23;CL:0002321!6.61e-07!70;CL:0000220!6.61e-07!70|ontology_enrichment_celltype_v019_2=CL:0000221,6.22e-18,44;CL:0000133,6.22e-18,44;CL:0002319,1.20e-17,43;CL:0000393,1.35e-15,39;CL:0000211,1.35e-15,39;CL:0000540,7.19e-15,33;CL:0000047,7.19e-15,33;CL:0000031,7.19e-15,33;CL:0000404,7.19e-15,33;CL:0000117,5.90e-14,23;CL:0000337,5.90e-14,23;CL:0002321,6.40e-07,70|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!9.26e-36!73;UBERON:0005743!9.26e-36!73;UBERON:0000073!4.17e-35!75;UBERON:0001016!4.17e-35!75;UBERON:0004121!3.63e-29!102;UBERON:0000924!3.63e-29!102;UBERON:0006601!3.63e-29!102;UBERON:0002346!1.08e-28!71;UBERON:0003075!1.08e-28!71;UBERON:0007284!1.08e-28!71;UBERON:0001049!1.16e-27!52;UBERON:0005068!1.16e-27!52;UBERON:0006241!1.16e-27!52;UBERON:0007135!1.16e-27!52;UBERON:0000955!4.49e-26!50;UBERON:0006238!4.49e-26!50;UBERON:0000033!8.68e-26!63;UBERON:0002616!1.45e-25!49;UBERON:0003056!1.27e-22!49;UBERON:0003080!1.18e-21!40;UBERON:0002780!3.25e-21!39;UBERON:0001890!3.25e-21!39;UBERON:0006240!3.25e-21!39;UBERON:0007811!8.97e-21!86;UBERON:0002020!1.86e-20!34;UBERON:0000153!3.95e-19!94;UBERON:0002791!3.38e-17!29;UBERON:0003528!3.38e-17!29;UBERON:0001893!3.38e-17!29;UBERON:0000956!3.01e-12!21;UBERON:0001869!3.01e-12!21;UBERON:0000203!3.01e-12!21;UBERON:0002619!1.88e-10!17;UBERON:0000025!4.26e-10!114;UBERON:0004111!1.41e-08!122;UBERON:0002021!2.84e-07!10;UBERON:0000411!2.84e-07!10;UBERON:0001950!2.84e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0001017,9.25e-36,73;UBERON:0001016,4.17e-35,75;UBERON:0002346,1.98e-29,64;UBERON:0003075,1.98e-29,64;UBERON:0007284,1.98e-29,64;UBERON:0004121,3.78e-29,95;UBERON:0000924,3.78e-29,95;UBERON:0006601,3.78e-29,95;UBERON:0000073,4.32e-29,54;UBERON:0001049,1.16e-27,52;UBERON:0005068,1.16e-27,52;UBERON:0006241,1.16e-27,52;UBERON:0007135,1.16e-27,52;UBERON:0010371,6.63e-25,73;UBERON:0010314,8.18e-25,92;UBERON:0000955,2.55e-24,47;UBERON:0006238,2.55e-24,47;UBERON:0002616,8.10e-24,46;UBERON:0003056,1.27e-22,49;UBERON:0003080,1.18e-21,40;UBERON:0002780,3.25e-21,39;UBERON:0001890,3.25e-21,39;UBERON:0006240,3.25e-21,39;UBERON:0002020,1.86e-20,34;UBERON:0003528,3.38e-17,29;UBERON:0002791,3.38e-17,29;UBERON:0001893,3.38e-17,29;UBERON:0000956,3.01e-12,21;UBERON:0001869,3.01e-12,21;UBERON:0000203,3.01e-12,21;UBERON:0002619,1.88e-10,17;UBERON:0000025,4.26e-10,114;UBERON:0004111,1.41e-08,122;UBERON:0002021,2.84e-07,10;UBERON:0000411,2.84e-07,10;UBERON:0001950,2.84e-07,10|phase1_expression=28.3463459375485,0,0.909998478779072,0,0,3.52546471014969,2.80335168714631,4.00282302668886,4.36445038670167,2.10658073689794,1.02730780935303,1.35612670292072,2.73921167889929,3.14713448708391,14.3237197580735,12.3509913107794,13.9912375625629,2.5236973228659,4.52477630898938,5.09267582157636,52.0464935724547,15.3900974361372,12.7987896678078,1.75991665072747,1.60586496747019,0,0.430761996159075,0.861884930743556,0.760093677825496,0.504060259519861,1.77384408524244,15.8757668364908,15.3766196896143,31.6963362030877,3.46621943701529,2.99222361645286,3.67504841272264,2.51118978442145,9.37602413428561,3.14114246384279,2.35292595212406,4.09827290975067,3.39857247121808,28.578577680456,24.1277096302445,18.3546752161682,19.559783608701,27.2531445475558,38.2253957957981,34.8029519342967,28.97718927645,34.5006154475932,3.18786951509699,5.07753499407941,3.6970317905671,11.5766746216176,12.0344044774278,18.0485232297105,53.816178588653,43.9062512795787,32.9592329823213,24.0579617769084,17.7858959222228,4.49949858640699,8.89979726310277,1.4209602298922,22.4700082888804,37.2691756161908,36.4987435325841,30.6463480012938,35.9655683910863,55.1306399899341,48.8119475503066,35.0323685754769,35.4628242767475,29.4150011715207,34.1359231098105,40.8599481872601,41.1665509126733,45.7645418423773,50.9586174865422,45.8403766089949,61.1410767813024,52.3369227329462,44.4642901030517,40.9533733808398,47.5521413869004,48.0910570229276,9.31432177998164,12.7715936580468,8.69593466105033,5.16254326188832,1.3599426674155,5.39703191637817,1.29955283489534,4.48026887097336,9.12888730856387,10.5666799998396,9.09251016110041,10.6001872353102,19.7180787687353,21.815501160434,20.3844191765317,7.11066703153331,5.84525810730278,5.82727690592727,5.05524445014783,13.35951392713,3.88406825470758,11.4300447079915,15.4401940821861,11.2652226975492,11.3001593655469,15.6751546174727,11.0533384707563,14.325991411583,3.70792451601561,6.50697106139602,7.07688441559899,9.38247729694973,8.3919777014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| ||
|EntrezGene=68948 | |||
|HGNC= | |||
|MCL_coexpression_id=60 | |||
|UniProt=Q9DB54 | |||
|association_with_transcript=0bp_to_ENSMUST00000031419_5end | |||
|description=CAGE_peak_1_at_1500011H22Rik_5end | |||
|id=chr5:122822239..122822399,- | |||
|ontology_enrichment_celltype=CL:0000221!6.22e-18!44;CL:0000133!6.22e-18!44;CL:0002319!1.20e-17!43;CL:0000055!1.27e-17!50;CL:0000393!1.35e-15!39;CL:0000211!1.35e-15!39;CL:0000540!7.19e-15!33;CL:0000047!7.19e-15!33;CL:0000031!7.19e-15!33;CL:0000404!7.19e-15!33;CL:0000117!5.90e-14!23;CL:0000337!5.90e-14!23;CL:0002321!6.61e-07!70;CL:0000220!6.61e-07!70 | |||
|ontology_enrichment_celltype_v019_2=CL:0000221,6.22e-18,44;CL:0000133,6.22e-18,44;CL:0002319,1.20e-17,43;CL:0000393,1.35e-15,39;CL:0000211,1.35e-15,39;CL:0000540,7.19e-15,33;CL:0000047,7.19e-15,33;CL:0000031,7.19e-15,33;CL:0000404,7.19e-15,33;CL:0000117,5.90e-14,23;CL:0000337,5.90e-14,23;CL:0002321,6.40e-07,70 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!9.26e-36!73;UBERON:0005743!9.26e-36!73;UBERON:0000073!4.17e-35!75;UBERON:0001016!4.17e-35!75;UBERON:0004121!3.63e-29!102;UBERON:0000924!3.63e-29!102;UBERON:0006601!3.63e-29!102;UBERON:0002346!1.08e-28!71;UBERON:0003075!1.08e-28!71;UBERON:0007284!1.08e-28!71;UBERON:0001049!1.16e-27!52;UBERON:0005068!1.16e-27!52;UBERON:0006241!1.16e-27!52;UBERON:0007135!1.16e-27!52;UBERON:0000955!4.49e-26!50;UBERON:0006238!4.49e-26!50;UBERON:0000033!8.68e-26!63;UBERON:0002616!1.45e-25!49;UBERON:0003056!1.27e-22!49;UBERON:0003080!1.18e-21!40;UBERON:0002780!3.25e-21!39;UBERON:0001890!3.25e-21!39;UBERON:0006240!3.25e-21!39;UBERON:0007811!8.97e-21!86;UBERON:0002020!1.86e-20!34;UBERON:0000153!3.95e-19!94;UBERON:0002791!3.38e-17!29;UBERON:0003528!3.38e-17!29;UBERON:0001893!3.38e-17!29;UBERON:0000956!3.01e-12!21;UBERON:0001869!3.01e-12!21;UBERON:0000203!3.01e-12!21;UBERON:0002619!1.88e-10!17;UBERON:0000025!4.26e-10!114;UBERON:0004111!1.41e-08!122;UBERON:0002021!2.84e-07!10;UBERON:0000411!2.84e-07!10;UBERON:0001950!2.84e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,9.25e-36,73;UBERON:0001016,4.17e-35,75;UBERON:0002346,1.98e-29,64;UBERON:0003075,1.98e-29,64;UBERON:0007284,1.98e-29,64;UBERON:0004121,3.78e-29,95;UBERON:0000924,3.78e-29,95;UBERON:0006601,3.78e-29,95;UBERON:0000073,4.32e-29,54;UBERON:0001049,1.16e-27,52;UBERON:0005068,1.16e-27,52;UBERON:0006241,1.16e-27,52;UBERON:0007135,1.16e-27,52;UBERON:0010371,6.63e-25,73;UBERON:0010314,8.18e-25,92;UBERON:0000955,2.55e-24,47;UBERON:0006238,2.55e-24,47;UBERON:0002616,8.10e-24,46;UBERON:0003056,1.27e-22,49;UBERON:0003080,1.18e-21,40;UBERON:0002780,3.25e-21,39;UBERON:0001890,3.25e-21,39;UBERON:0006240,3.25e-21,39;UBERON:0002020,1.86e-20,34;UBERON:0003528,3.38e-17,29;UBERON:0002791,3.38e-17,29;UBERON:0001893,3.38e-17,29;UBERON:0000956,3.01e-12,21;UBERON:0001869,3.01e-12,21;UBERON:0000203,3.01e-12,21;UBERON:0002619,1.88e-10,17;UBERON:0000025,4.26e-10,114;UBERON:0004111,1.41e-08,122;UBERON:0002021,2.84e-07,10;UBERON:0000411,2.84e-07,10;UBERON:0001950,2.84e-07,10 | |||
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| |||
|short_description=p1@1500011H22Rik | |||
}} |
Revision as of 06:19, 14 September 2013
Short description: | p1@1500011H22Rik |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_1500011H22Rik_5end |
Coexpression cluster: | MCL_coexpression_mm9:60 |
Association with transcript: | 0bp_to_ENSMUST00000031419_5end |
EntrezGene: | 1500011H22Rik |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 6.22e-18 | 44 |
neurectodermal cell | 6.22e-18 | 44 |
neural cell | 1.20e-17 | 43 |
electrically responsive cell | 1.35e-15 | 39 |
electrically active cell | 1.35e-15 | 39 |
neuron | 7.19e-15 | 33 |
neuronal stem cell | 7.19e-15 | 33 |
neuroblast | 7.19e-15 | 33 |
electrically signaling cell | 7.19e-15 | 33 |
CNS neuron (sensu Vertebrata) | 5.90e-14 | 23 |
neuroblast (sensu Vertebrata) | 5.90e-14 | 23 |
embryonic cell | 6.40e-07 | 70 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.