Personal tools

FFCP PHASE1:Mm9::chr4:88940458..88940492,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 1: Line 1:
{{FFCP
{{FFCP|EntrezGene=12578|HGNC=|MCL_coexpression_id=1786|UniProt=Q64364|association_with_transcript=30bp_to_ENSMUST00000030237,NM_009877,uc008toi.1_5end|description=CAGE_peak_1_at_Cdkn2a_5end|id=chr4:88940458..88940492,-|ontology_enrichment_celltype=CL:0000107!5.42e-07!9;CL:0002453!6.28e-07!8|ontology_enrichment_celltype_v019_2=CL:0000107,7.32e-12,9;CL:0002453,9.68e-12,8;CL:0000128,3.77e-09,6;CL:0000126,3.77e-09,6;CL:0000127,3.77e-09,6;CL:0000222,4.92e-09,7;CL:0000333,5.64e-09,10;CL:0000095,5.64e-09,10;CL:0000243,5.64e-09,10;CL:0000123,5.64e-09,10;CL:0000125,5.64e-09,10;CL:0000030,5.64e-09,10;CL:0000339,5.64e-09,10;CL:0000034,1.84e-08,97;CL:0000680,2.41e-08,6;CL:0000187,2.41e-08,6;CL:0000056,2.41e-08,6;CL:0000219,1.13e-07,54;CL:0002321,1.54e-07,70;CL:0000723,4.28e-07,91;CL:0000048,4.28e-07,91|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003133!7.09e-09!24;UBERON:0000991!1.47e-08!18;UBERON:0005564!1.47e-08!18;UBERON:0004176!3.51e-08!17;UBERON:0009196!3.51e-08!17;UBERON:0009117!3.51e-08!17;UBERON:0005156!2.01e-07!26;UBERON:0000990!2.01e-07!26;UBERON:0000473!2.72e-07!14;UBERON:0002410!5.42e-07!9|ontology_enrichment_uberon_v019_2=UBERON:0002410,7.32e-12,9;UBERON:0000991,7.79e-10,18;UBERON:0005564,7.79e-10,18;UBERON:0000010,2.79e-09,11;UBERON:0004176,3.74e-09,17;UBERON:0009196,3.74e-09,17;UBERON:0009117,3.74e-09,17;UBERON:0003133,8.16e-09,24;UBERON:0000473,1.73e-08,14;UBERON:0005156,7.80e-08,26;UBERON:0000990,7.80e-08,26;UBERON:0003135,9.45e-08,15;UBERON:0003101,4.14e-07,16;UBERON:0000079,4.14e-07,16|phase1_expression=0,0.697950815278722,0.909998478779072,0,0.500895729946347,0.16787927191189,0.467225281191051,0.129123323441576,0,0,0,0,0,0,0.333109761815663,0.202475267389826,0,0.157731082679119,0,0.42438965179803,1.27564935226605,2.97872853602656,5.22399578277871,13.2793710918528,12.15869189656,1.14846392823004,1.29228598847722,1.29282739611533,0.950117097281869,0.756090389279792,1.55211357458713,20.3209815507082,12.3012957516914,15.8481681015439,0,0,0,0,0,0,0,0,0,58.4161235406679,49.1678116414646,88.1024410376071,57.1145681374069,20.7123898561424,29.6576346691537,48.4130448694966,18.1982348112971,50.3133975277401,0.335565212115473,0,0,8.2323019531503,1.14613375975503,33.5186859980338,0,0,0,313.431192163947,152.958704931116,17.0980946283466,15.8218618010716,9.9467216092454,42.5432156936135,36.8849573108692,0,0,0,0,0.220868540951614,0,0,0,0,0.127687338085188,0,0,0.0914876436024097,0,0,0,0.15279824777681,0.294628585473668,0.142371680799103,0,0.075726193333184,0.453429360640713,2.6087803983151,0,0,0,0,0,0.140444420131752,7.49893419343454,9.87186817490901,14.4869225549239,0.14084341977668,0,0,0,4.32982082022428,3.54703811665138,4.04419556011827,0.11418387971906,1.29468941823586,1.1875371125186,0,0,0.230615497256059,0.301445281105245,0.470354828542819,1.0053327306374,6.67426412882809,0.144599356919912,0,0.161766849947409,0,0,0,0,0.209446706813455,0.510914110417183,0,0,0,0,0,0,0.173824320192276,0,0,0,0.407357455401265,0.870848794270651,0,0.420883711772948,1.30120442962704,0.229902104433473,0,0.150704817835715,0.612328492361951,1.5373646434182,0.655912071918102,0.258703370739016,0,0.189106080167819,0,0.219195732427575,0,0,0.205782136407943,1.59227413454795,0,0,0,0,0,0.180062061461015,0,0.393528463494808,0,0.697601834251224,0,0,0,0,0.162137619091711,0,0.219550115291051,0.134206418760372,0,0.308713837137853,0.330418782983798,0,0,0.232236671860439,0.515469845288373,0,0,0.380451252225118,0,0,0.502670417600539,0,0.38992817423824,0.898819408654221,0.216138049874694,0,0,0.114248512609729,0,0,0,0,0.126473074248515,0,0,0,0,0,0,0,0,0,0.25462585178142,0,0,0.274561413188081,0,0,0.312037673114561,0.252578877947112,0,0,0.184753190166605,0.189491411770485,0,0.339490171550376,0,0.167506257441816,0,0,0.472905432318573,0.221464689648775,0,0,0.172684981865896,0.433947175744535,3.01582567878545,0.54390568381871,0,0,0,0.117211686592203,0,0.252470927204373,13.2513452154828,14.8366722832723,25.6353843302031,34.8894445010726,33.1970024382767,34.8184132870264,14.1683745586213,20.4579100537918,13.8350722281283,0.642642632843614,0.425820255624806,2.84904965867608,1.79175655288934,0,0,0,0.302323556964751,0,0,0.307435147943927,0,0,0,0,0,0,0,0,0.129358683782755,0,0.177340233642274,0,0,0.304464949114599,3.75474732901937,4.02480934641258,0,0.16488625294148,0.161464426695906,0.241251699712623,0.119372344003136,0.164140899745061,0.291480836629851,0,0.341741761595705,0,0,0.188368457004691,0,0.915112692826091,0,0,0,0,0.158167996790568,0.203319467126849,0.324016022465404,0,0.218362563746178,0.269728692769641,0.330613822901344,0,0,0.621339313086926,7.89170114157866,3.13984746692355,4.13646226142744,4.66682852025714,7.62042958518613,7.26511339610346,1.87771581833206,11.5881902511116,35.3375990714646,11.5960377996483,6.04863013141517,0.316011120628178,0.202725215290164,0.205421914329655,0.389762468933385,1.61124026100733,0.198681354781265,0.360586348559907,0.147689527174577,0.908698049533329,0.457240839929999,0.504130925684203,0.779663045918019,0.769694733122636,0.584384510907845,0.453460767230423,93.6780723238553,46.20263615388,54.2267310855973,0.19318959403219,0.187682475451182,0.549454872801795,0.857473516316263,0.501572104035363,0,0,0,0.343706364687375,0,0,0,0,0,0,0.207574695168353,0.399024873401031,0,0,0,0,0.222246727801615,0,0,0,0,0.188626341386076,0.280924522409647,0.0640251524048693,0.114870937911227,0,0,0,0,0,0,0,0.715308569841963,0,0,0,0,0.526139422875686,0.135804113845862,0,0.355905054372522,0.0985044823755635,0,0,0,0.499621155875892,0,0,0.191288332068843,0.220591419119515,0.463735671240843|short_description=p1@Cdkn2a}}
|EntrezGene=12578
|HGNC=
|MCL_coexpression_id=1786
|UniProt=Q64364
|association_with_transcript=30bp_to_ENSMUST00000030237,NM_009877,uc008toi.1_5end
|description=CAGE_peak_1_at_Cdkn2a_5end
|id=chr4:88940458..88940492,-
|ontology_enrichment_celltype=CL:0000107!5.42e-07!9;CL:0002453!6.28e-07!8
|ontology_enrichment_celltype_v019_2=CL:0000107,7.32e-12,9;CL:0002453,9.68e-12,8;CL:0000128,3.77e-09,6;CL:0000126,3.77e-09,6;CL:0000127,3.77e-09,6;CL:0000222,4.92e-09,7;CL:0000333,5.64e-09,10;CL:0000095,5.64e-09,10;CL:0000243,5.64e-09,10;CL:0000123,5.64e-09,10;CL:0000125,5.64e-09,10;CL:0000030,5.64e-09,10;CL:0000339,5.64e-09,10;CL:0000034,1.84e-08,97;CL:0000680,2.41e-08,6;CL:0000187,2.41e-08,6;CL:0000056,2.41e-08,6;CL:0000219,1.13e-07,54;CL:0002321,1.54e-07,70;CL:0000723,4.28e-07,91;CL:0000048,4.28e-07,91
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0003133!7.09e-09!24;UBERON:0000991!1.47e-08!18;UBERON:0005564!1.47e-08!18;UBERON:0004176!3.51e-08!17;UBERON:0009196!3.51e-08!17;UBERON:0009117!3.51e-08!17;UBERON:0005156!2.01e-07!26;UBERON:0000990!2.01e-07!26;UBERON:0000473!2.72e-07!14;UBERON:0002410!5.42e-07!9
|ontology_enrichment_uberon_v019_2=UBERON:0002410,7.32e-12,9;UBERON:0000991,7.79e-10,18;UBERON:0005564,7.79e-10,18;UBERON:0000010,2.79e-09,11;UBERON:0004176,3.74e-09,17;UBERON:0009196,3.74e-09,17;UBERON:0009117,3.74e-09,17;UBERON:0003133,8.16e-09,24;UBERON:0000473,1.73e-08,14;UBERON:0005156,7.80e-08,26;UBERON:0000990,7.80e-08,26;UBERON:0003135,9.45e-08,15;UBERON:0003101,4.14e-07,16;UBERON:0000079,4.14e-07,16
|phase1_expression=0,0.697950815278722,0.909998478779072,0,0.500895729946347,0.16787927191189,0.467225281191051,0.129123323441576,0,0,0,0,0,0,0.333109761815663,0.202475267389826,0,0.157731082679119,0,0.42438965179803,1.27564935226605,2.97872853602656,5.22399578277871,13.2793710918528,12.15869189656,1.14846392823004,1.29228598847722,1.29282739611533,0.950117097281869,0.756090389279792,1.55211357458713,20.3209815507082,12.3012957516914,15.8481681015439,0,0,0,0,0,0,0,0,0,58.4161235406679,49.1678116414646,88.1024410376071,57.1145681374069,20.7123898561424,29.6576346691537,48.4130448694966,18.1982348112971,50.3133975277401,0.335565212115473,0,0,8.2323019531503,1.14613375975503,33.5186859980338,0,0,0,313.431192163947,152.958704931116,17.0980946283466,15.8218618010716,9.9467216092454,42.5432156936135,36.8849573108692,0,0,0,0,0.220868540951614,0,0,0,0,0.127687338085188,0,0,0.0914876436024097,0,0,0,0.15279824777681,0.294628585473668,0.142371680799103,0,0.075726193333184,0.453429360640713,2.6087803983151,0,0,0,0,0,0.140444420131752,7.49893419343454,9.87186817490901,14.4869225549239,0.14084341977668,0,0,0,4.32982082022428,3.54703811665138,4.04419556011827,0.11418387971906,1.29468941823586,1.1875371125186,0,0,0.230615497256059,0.301445281105245,0.470354828542819,1.0053327306374,6.67426412882809,0.144599356919912,0,0.161766849947409,0,0,0,0,0.209446706813455,0.510914110417183,0,0,0,0,0,0,0.173824320192276,0,0,0,0.407357455401265,0.870848794270651,0,0.420883711772948,1.30120442962704,0.229902104433473,0,0.150704817835715,0.612328492361951,1.5373646434182,0.655912071918102,0.258703370739016,0,0.189106080167819,0,0.219195732427575,0,0,0.205782136407943,1.59227413454795,0,0,0,0,0,0.180062061461015,0,0.393528463494808,0,0.697601834251224,0,0,0,0,0.162137619091711,0,0.219550115291051,0.134206418760372,0,0.308713837137853,0.330418782983798,0,0,0.232236671860439,0.515469845288373,0,0,0.380451252225118,0,0,0.502670417600539,0,0.38992817423824,0.898819408654221,0.216138049874694,0,0,0.114248512609729,0,0,0,0,0.126473074248515,0,0,0,0,0,0,0,0,0,0.25462585178142,0,0,0.274561413188081,0,0,0.312037673114561,0.252578877947112,0,0,0.184753190166605,0.189491411770485,0,0.339490171550376,0,0.167506257441816,0,0,0.472905432318573,0.221464689648775,0,0,0.172684981865896,0.433947175744535,3.01582567878545,0.54390568381871,0,0,0,0.117211686592203,0,0.252470927204373,13.2513452154828,14.8366722832723,25.6353843302031,34.8894445010726,33.1970024382767,34.8184132870264,14.1683745586213,20.4579100537918,13.8350722281283,0.642642632843614,0.425820255624806,2.84904965867608,1.79175655288934,0,0,0,0.302323556964751,0,0,0.307435147943927,0,0,0,0,0,0,0,0,0.129358683782755,0,0.177340233642274,0,0,0.304464949114599,3.75474732901937,4.02480934641258,0,0.16488625294148,0.161464426695906,0.241251699712623,0.119372344003136,0.164140899745061,0.291480836629851,0,0.341741761595705,0,0,0.188368457004691,0,0.915112692826091,0,0,0,0,0.158167996790568,0.203319467126849,0.324016022465404,0,0.218362563746178,0.269728692769641,0.330613822901344,0,0,0.621339313086926,7.89170114157866,3.13984746692355,4.13646226142744,4.66682852025714,7.62042958518613,7.26511339610346,1.87771581833206,11.5881902511116,35.3375990714646,11.5960377996483,6.04863013141517,0.316011120628178,0.202725215290164,0.205421914329655,0.389762468933385,1.61124026100733,0.198681354781265,0.360586348559907,0.147689527174577,0.908698049533329,0.457240839929999,0.504130925684203,0.779663045918019,0.769694733122636,0.584384510907845,0.453460767230423,93.6780723238553,46.20263615388,54.2267310855973,0.19318959403219,0.187682475451182,0.549454872801795,0.857473516316263,0.501572104035363,0,0,0,0.343706364687375,0,0,0,0,0,0,0.207574695168353,0.399024873401031,0,0,0,0,0.222246727801615,0,0,0,0,0.188626341386076,0.280924522409647,0.0640251524048693,0.114870937911227,0,0,0,0,0,0,0,0.715308569841963,0,0,0,0,0.526139422875686,0.135804113845862,0,0.355905054372522,0.0985044823755635,0,0,0,0.499621155875892,0,0,0.191288332068843,0.220591419119515,0.463735671240843
|short_description=p1@Cdkn2a
}}

Revision as of 05:35, 14 September 2013

Short description:p1@Cdkn2a
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Cdkn2a_5end
Coexpression cluster:MCL_coexpression_mm9:1786
Association with transcript: 30bp_to_ENSMUST00000030237, NM_009877, uc008toi.1_5end
EntrezGene:Cdkn2a
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Cdkn2a

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.70
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.91
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.17
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.47
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.13
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.20
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.16
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.42
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.28
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H22.98
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I95.22
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D113.28
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D212.16
GP2+ M cell, pool1.CNhs13228.11845-124H91.15
GP2+ M cell, pool2.CNhs13231.11846-124I11.29
GP2+ M cell, pool3.CNhs13240.11847-124I21.29
Ileum epithelium, pool1.CNhs13199.10252-104B90.95
Ileum epithelium, pool2.CNhs13232.10253-104C10.76
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C81.55
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I320.32
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G612.30
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E915.85
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D858.42
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D949.17
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B388.10
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B757.11
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C220.71
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B829.66
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C348.41
Mouse Astrocytes, donor2.CNhs12078.11552-120C418.20
Mouse Astrocytes, donor3.CNhs12107.11633-122C450.31
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.34
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C18.23
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E11.15
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C533.52
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C6313.43
Mouse Meningeal cells, donor3.CNhs12109.11639-122D1152.96
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C717.10
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E715.82
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D29.95
Mouse Microglia, donor1.CNhs12629.11718-123C842.54
Mouse Microglia, donor2.CNhs12634.11736-123E836.88
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.22
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.13
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.09
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.15
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.29
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.14
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.45
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G32.61
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.14
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I77.50
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E39.87
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I814.49
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.14
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G14.33
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G23.55
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G34.04
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.11
accessory axillary lymph node, adult.CNhs10475.1063-29H91.29
adrenal gland, adult.CNhs10508.49-24D71.19
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.30
adrenal gland, neonate N00.CNhs11191.1311-23C10.47
adrenal gland, neonate N25.CNhs11223.1377-27I31.01
amnion, adult pregnant day17.5.CNhs10488.583-22A86.67
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.21
colon, adult.CNhs10468.36-18H70.51
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A40.00
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.00
cortex, adult.CNhs10473.12-14D50.17
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.00
diencephalon, neonate N30.CNhs11201.1388-42B20.00
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.41
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.87
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.42
eyeball, embryo E12.CNhs11016.345-16C61.30
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.15
eyeball, neonate N00.CNhs11207.633-15C60.61
eyeball, neonate N01.CNhs11140.1532-43E71.54
eyeball, neonate N02.CNhs11205.1551-44G80.66
eyeball, neonate N16.CNhs11188.777-19A20.26
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I61.59
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.39
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.70
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.16
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.13
hippocampus, adult.CNhs10478.13-16E80.00
hippocampus, neonate N00.CNhs11228.627-43G10.31
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.52
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.38
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.50
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.39
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.11
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.00
kidney, neonate N10.CNhs11206.758-6D50.13
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.27
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A30.25
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.18
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.34
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.47
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.43
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A13.02
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.54
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C20.00
medulla oblongata, neonate N30.CNhs11200.1396-42A30.12
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E113.25
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E214.84
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E325.64
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D734.89
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D833.20
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D934.82
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D414.17
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D520.46
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D613.84
olfactory brain, adult.CNhs10489.18-22I90.64
ovary, adult.CNhs10507.91-2I70.43
ovary, embryo E18.CNhs11040.505-44H72.85
ovary, neonate N00.CNhs11217.1299-22I41.79
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.13
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.18
pituitary gland, embryo E16.CNhs11036.449-43F60.00
pituitary gland, embryo E17.CNhs11039.1265-44F50.00
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I73.75
placenta, adult pregnant day17.CNhs10464.577-18G34.02
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.16
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H30.24
skin, neonate N06.CNhs11097.693-20I50.12
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C90.00
spleen, adult.CNhs10465.25-2G20.34
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.92
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.32
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.27
stomach, neonate N07.CNhs11210.718-18A90.33
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G57.89
testis, embryo E13.CNhs11031.389-23F53.14
testis, embryo E15.CNhs11034.443-27C54.14
testis, embryo E16.CNhs11033.470-26G54.67
testis, embryo E17.CNhs11029.486-18I57.62
testis, embryo E18.CNhs11027.503-18G57.27
testis, neonate N00.CNhs11189.1300-22B71.88
testis, neonate N07.CNhs11222.726-26I411.59
testis, neonate N10.CNhs11204.763-44D935.34
testis, neonate N20.CNhs11110.839-18H311.60
testis, neonate N30.CNhs11130.1391-42E26.05
thymus, adult.CNhs10471.38-12B50.32
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.21
thymus, embryo E16.CNhs11002.456-26C50.39
thymus, embryo E17.CNhs10581.478-18C11.61
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.36
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.91
thymus, neonate N07.CNhs11211.713-19D30.46
thymus, neonate N10.CNhs11194.748-24E40.50
thymus, neonate N20.CNhs11186.820-7A20.78
thymus, neonate N25.CNhs11125.1362-25G70.77
thymus, neonate N30.CNhs11132.1393-42G20.58
tongue, adult.CNhs10499.32-1B40.45
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H393.68
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F746.20
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G554.23
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F50.19
uterus, adult.CNhs10509.92-27E50.55
vagina, adult.CNhs10502.89-27D50.86
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.34
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.21
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H20.00
whole body, embryo E14.5.CNhs10578.420-27D20.00
whole body, embryo E14.CNhs10519.395-14B10.00
whole body, embryo E16.CNhs10514.453-14F20.00
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.28
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.06
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.11
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.72
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.14
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.36
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.10
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.00
whole body, embryo E17.5.CNhs10513.490-9F90.00
whole body, embryo E17.CNhs10517.475-3I50.50
whole body, embryo E18.CNhs10516.493-3B30.00
whole body, neonate N00.CNhs10525.657-19C20.00
whole body, neonate N01.CNhs10576.659-23C60.19
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.46





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
autonomic nervous system7.32e-129
gonad7.79e-1018
gonad primordium7.79e-1018
peripheral nervous system2.79e-0911
external genitalia3.74e-0917
indifferent external genitalia3.74e-0917
indifferent gonad3.74e-0917
reproductive organ8.16e-0924
testis1.73e-0814
reproductive structure7.80e-0826
reproductive system7.80e-0826
male reproductive organ9.45e-0815
male organism4.14e-0716
male reproductive system4.14e-0716







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr4:88940458..88940492,-&oldid=3013636"