FFCP PHASE1:Mm9::chr4:8840833..8840836,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=260|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr4:8840833..8840836,-|id=chr4:8840833..8840836,-|ontology_enrichment_celltype=CL:0000215!3.02e-07!3;CL:0000107!7.60e-07!9|ontology_enrichment_celltype_v019_2=CL:0000213,1.10e-29,1;CL:0002078,1.10e-29,1;CL:0000115,1.10e-29,1;CL:0002262,1.10e-29,1;CL:1000398,1.10e-29,1;CL:0000215,7.15e-11,3;CL:0000182,4.77e-07,5|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000010!1.02e-09!11;UBERON:0002410!7.60e-07!9|ontology_enrichment_uberon_v019_2=UBERON:0002394,1.10e-29,1;UBERON:0001281,1.10e-29,1;UBERON:0000353,1.10e-29,1;UBERON:0003497,1.10e-29,1;UBERON:0003909,1.10e-29,1;UBERON:0003928,1.10e-29,1;UBERON:0003835,1.10e-29,1;UBERON:0003513,1.10e-29,1;UBERON:0001280,1.10e-29,1;UBERON:0004647,1.10e-29,1;UBERON:0002294,1.10e-29,1;UBERON:0001173,1.10e-29,1;UBERON:0004912,1.10e-29,1;UBERON:0005171,1.10e-29,1;UBERON:0000055,4.77e-07,5;UBERON:0007500,4.77e-07,5;UBERON:0001981,4.77e-07,5;UBERON:0002049,4.77e-07,5;UBERON:0007798,4.77e-07,5;UBERON:0004537,4.77e-07,5;UBERON:0006965,4.77e-07,5|phase1_expression=0,0,0,0,0,0,0,0,2.39340827657833,0.936258105287974,0,0,0.171200729931206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.418531630736908,0,0,0.588231488031014,1.36609096991689,0.485510353031154,0,0,0,0,0,0,0.194429899074283,0,0,0.167782606057736,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0.0755715601067855,1.15945795480671,0.860423876981386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220841518460394,0,0,0,0,0,0.11981512450592,0,0.127070227073065,0,0,0,0,0,0,0,0,0,0,0,0.130120442962704,0,0.180062129805349,0,0,0,0,0,0,0,0,0,0,0,0,0,0.702213187313235,0.257347907114715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,0,0,0,0,0.232236671860439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167506257441816,0,0,0,0,0,0,0,0,0,0,0,0,0.160550589987792,0,0,0,0.315508219416257,0,0.430846795465598,0.955875191810208,0.222798674082394,0,0,0.292255857911312,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0.129358683782755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185194527369712,0,0,0,0.169978429993855,0.419854356970974,0.414599921413271,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202725215290164,0,0,0,0,0,0,0,0,0,0,0,0.116876902181569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177475806159338,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr4:8840833..8840836,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=260 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr4:8840833..8840836,- | |||
|id=chr4:8840833..8840836,- | |||
|ontology_enrichment_celltype=CL:0000215!3.02e-07!3;CL:0000107!7.60e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000213,1.10e-29,1;CL:0002078,1.10e-29,1;CL:0000115,1.10e-29,1;CL:0002262,1.10e-29,1;CL:1000398,1.10e-29,1;CL:0000215,7.15e-11,3;CL:0000182,4.77e-07,5 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000010!1.02e-09!11;UBERON:0002410!7.60e-07!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002394,1.10e-29,1;UBERON:0001281,1.10e-29,1;UBERON:0000353,1.10e-29,1;UBERON:0003497,1.10e-29,1;UBERON:0003909,1.10e-29,1;UBERON:0003928,1.10e-29,1;UBERON:0003835,1.10e-29,1;UBERON:0003513,1.10e-29,1;UBERON:0001280,1.10e-29,1;UBERON:0004647,1.10e-29,1;UBERON:0002294,1.10e-29,1;UBERON:0001173,1.10e-29,1;UBERON:0004912,1.10e-29,1;UBERON:0005171,1.10e-29,1;UBERON:0000055,4.77e-07,5;UBERON:0007500,4.77e-07,5;UBERON:0001981,4.77e-07,5;UBERON:0002049,4.77e-07,5;UBERON:0007798,4.77e-07,5;UBERON:0004537,4.77e-07,5;UBERON:0006965,4.77e-07,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,2.39340827657833,0.936258105287974,0,0,0.171200729931206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.418531630736908,0,0,0.588231488031014,1.36609096991689,0.485510353031154,0,0,0,0,0,0,0.194429899074283,0,0,0.167782606057736,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0.0755715601067855,1.15945795480671,0.860423876981386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220841518460394,0,0,0,0,0,0.11981512450592,0,0.127070227073065,0,0,0,0,0,0,0,0,0,0,0,0.130120442962704,0,0.180062129805349,0,0,0,0,0,0,0,0,0,0,0,0,0,0.702213187313235,0.257347907114715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,0,0,0,0,0.232236671860439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167506257441816,0,0,0,0,0,0,0,0,0,0,0,0,0.160550589987792,0,0,0,0.315508219416257,0,0.430846795465598,0.955875191810208,0.222798674082394,0,0,0.292255857911312,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0.129358683782755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185194527369712,0,0,0,0.169978429993855,0.419854356970974,0.414599921413271,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202725215290164,0,0,0,0,0,0,0,0,0,0,0,0.116876902181569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177475806159338,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr4:8840833..8840836,- | |||
}} |
Revision as of 05:34, 14 September 2013
Short description: | p@chr4:8840833..8840836, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr4:8840833..8840836, - |
Coexpression cluster: | MCL_coexpression_mm9:260 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lining cell | 1.10e-29 | 1 |
meso-epithelial cell | 1.10e-29 | 1 |
endothelial cell | 1.10e-29 | 1 |
endothelial cell of sinusoid | 1.10e-29 | 1 |
endothelial cell of hepatic sinusoid | 1.10e-29 | 1 |
barrier cell | 7.15e-11 | 3 |
hepatocyte | 4.77e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
bile duct | 1.10e-29 | 1 |
hepatic sinusoid | 1.10e-29 | 1 |
parenchyma | 1.10e-29 | 1 |
abdomen blood vessel | 1.10e-29 | 1 |
sinusoid | 1.10e-29 | 1 |
digestive system duct | 1.10e-29 | 1 |
abdominal segment blood vessel | 1.10e-29 | 1 |
trunk blood vessel | 1.10e-29 | 1 |
liver parenchyma | 1.10e-29 | 1 |
liver lobule | 1.10e-29 | 1 |
biliary system | 1.10e-29 | 1 |
biliary tree | 1.10e-29 | 1 |
biliary bud | 1.10e-29 | 1 |
hepatic duct | 1.10e-29 | 1 |
vessel | 4.77e-07 | 5 |
epithelial tube open at both ends | 4.77e-07 | 5 |
blood vessel | 4.77e-07 | 5 |
vasculature | 4.77e-07 | 5 |
vascular system | 4.77e-07 | 5 |
blood vasculature | 4.77e-07 | 5 |
vascular cord | 4.77e-07 | 5 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.