FFCP PHASE1:Hg19::chr8:49834430..49834446,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=6591|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=11094|TSSclassifier=S|UniProt=O43623|association_with_transcript=-131bp_to_ENST00000396822_5end|description=CAGE_peak_5_at_SNAI2_5end|id=chr8:49834430..49834446,-|ontology_enrichment_celltype=CL:0002570!1.52e-10!8;CL:0000055!3.00e-09!180;CL:0000333!5.19e-09!41;CL:0000148!1.33e-08!10;CL:0000541!1.33e-08!10;CL:0000221!3.46e-08!71;CL:0000133!1.25e-07!59;CL:0000325!1.53e-07!39;CL:0000710!8.53e-07!20|ontology_enrichment_celltype_v019=CL:0000148;2.00e-47;10!CL:0002567;1.59e-40;3!CL:0000147;7.43e-34;14!CL:0000710;1.17e-23;20!CL:0000075;1.80e-17;27!CL:0002566;1.84e-14;1!CL:0000569;4.40e-14;4!CL:0002077;7.76e-12;34!CL:1000415;7.03e-08;2|ontology_enrichment_celltype_v019_2=CL:0000148,1.01e-47,10;CL:0000541,1.01e-47,10;CL:0002567,1.14e-40,3;CL:0000147,4.57e-34,14;CL:0000333,4.37e-24,41;CL:0000710,8.37e-24,20;CL:0000075,1.40e-17,27;CL:0000133,1.01e-16,59;CL:0002566,1.41e-14,1;CL:0000569,6.13e-14,4;CL:0000011,6.13e-14,4;CL:0002077,6.58e-14,34;CL:0000221,1.27e-13,72;CL:1000415,9.19e-08,2|ontology_enrichment_development_v019=CL:0000011;4.40e-14;4!CL:0000133;5.55e-10;59|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:1909;1.95e-27;2|ontology_enrichment_disease_v019_2=DOID:1909,2.09e-27,2|ontology_enrichment_uberon=UBERON:0003102!5.49e-08!95|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=|phase1_expression=0.181678379270557,0.214100523890983,0.140954404095971,0,0.446961094427288,0,0,0,0.261185628199839,0.245733936501509,0,0,0,0,0,0,0,0,0.487932798790507,0.61560529038394,0,0,0,0,0,0,0,0,0,0,0,0.919421224478927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50133791063589,0,0,0,0,0,0.087834785693126,0.130979075497713,0.364295288292542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35576626268671,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0.662045904066094,0,0.354668382198357,0,0,0,0,0.134710672069688,0.163461903113459,0.151357427644931,0,0,0.312160076830321,0,0,0,0.323745888736263,0,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0.179389635688862,0,0.423863802319124,0.300091096084402,0,0.257640540045629,0.37223371266318,0.168776332241266,0,0,0.0920498986422993,0,1.42003837006646,0.403008392910561,0.339121184620975,0.193260853163297,0.545492241181669,0.286804595389004,0,0,0.116193942869518,0,0.504641701751257,0,0,0.643240938192885,0,0,0.721879481669586,0,0.168584690078102,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0.100528972411631,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283550194484773,0.358234090811393,0,0.383382679165211,0,0,0,0,0,1.58744735730423,3.4378958300245,2.34434894420094,1.71072446022705,1.7480673759565,0,4.0015700568281,0.224262168690721,0,0.07333828582095,0,3.57656445851882,0.845302752556,0,0,0,0,0.266422179016099,0,0,0,0.325736184293735,0,0,0,0,0,0,0,0,0,0,0,0.289562613335158,0.205476322550383,0.179060963239896,0,0,0,0,0,0,0,0.335032530668698,0,0,0,0,0.12269149171914,0,0,0.207970861530807,0,0.157702415033935,0.117141414992713,0,0,0,0,0,0.173767228936166,0.195801157462741,0.343143423810856,0,0,0,0,0,0,0.496215615637554,0.460385919864187,0,0.512556597022804,0.511707249066704,0,0,0,0.355123450626254,0.0821271560138091,0,0.464841513839837,0,0,0.0920809889358963,0,0,0,0,0.15403067420883,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0,0.183138929636687,0,0,0,0,0.096670718292122,0.308097234229289,0,0,0.322260734604821,0.435050081742686,0.170453254832202,0.178064071293475,0.330569830721956,0,0.255225424989168,0.10115778085555,0,0.94443704049192,0,0,0.532306030317022,0,0,0,0,0,0,0,0,0,0,0,0.274537029736055,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202910376962704,0,0,0,0.0982490410131212,0,0,0,0.329294892959902,0,0,0.192444225451024,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.490080431962063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0.296964680832639,0.307160702099232,0,0,0.222617410045812,0,0,0,0,0,0,0,0.622079175323615,0.0898683511473268,0,0,0.197286811273867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0.307801034015188,0.227884111694002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0.103688191397247,0,0,0,0,0,0,0,0.293977192243133,0.0870592065804026,0,0,0,0,0,0,0,0,0.137041924646751,0,0,0,1.04206466326994,0,0,0,0,0,0,0,0,0,0,0.203996435272644,3.17845648891671,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.77380195455795,0,0,0.0788057072991982,0,0,0.179287339332845,0.575745591958336,0,0,0,0,0,0,0,0,0.170388021785422,0,0,0,0,0,0,0,0,0,0,0,0,0,0.638341257770182,0,0,0,0.327872630709804,0,0,0,0,0,0,0,0,0.124980407962107,1.21319294033318,2.56918800190471,0,0,0.144921028610825,0.597019211547496,0.233713309847224,0.554805861502613,0.568209015825267,0,0,1.14420034198462,0.907385542579434,1.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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=6591 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11094 | |||
|TSSclassifier=S | |||
|UniProt=O43623 | |||
|association_with_transcript=-131bp_to_ENST00000396822_5end | |||
|description=CAGE_peak_5_at_SNAI2_5end | |||
|id=chr8:49834430..49834446,- | |||
|ontology_enrichment_celltype=CL:0002570!1.52e-10!8;CL:0000055!3.00e-09!180;CL:0000333!5.19e-09!41;CL:0000148!1.33e-08!10;CL:0000541!1.33e-08!10;CL:0000221!3.46e-08!71;CL:0000133!1.25e-07!59;CL:0000325!1.53e-07!39;CL:0000710!8.53e-07!20 | |||
|ontology_enrichment_celltype_v019=CL:0000148;2.00e-47;10!CL:0002567;1.59e-40;3!CL:0000147;7.43e-34;14!CL:0000710;1.17e-23;20!CL:0000075;1.80e-17;27!CL:0002566;1.84e-14;1!CL:0000569;4.40e-14;4!CL:0002077;7.76e-12;34!CL:1000415;7.03e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,1.01e-47,10;CL:0000541,1.01e-47,10;CL:0002567,1.14e-40,3;CL:0000147,4.57e-34,14;CL:0000333,4.37e-24,41;CL:0000710,8.37e-24,20;CL:0000075,1.40e-17,27;CL:0000133,1.01e-16,59;CL:0002566,1.41e-14,1;CL:0000569,6.13e-14,4;CL:0000011,6.13e-14,4;CL:0002077,6.58e-14,34;CL:0000221,1.27e-13,72;CL:1000415,9.19e-08,2 | |||
|ontology_enrichment_development_v019=CL:0000011;4.40e-14;4!CL:0000133;5.55e-10;59 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1909;1.95e-27;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,2.09e-27,2 | |||
|ontology_enrichment_uberon=UBERON:0003102!5.49e-08!95 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0.181678379270557,0.214100523890983,0.140954404095971,0,0.446961094427288,0,0,0,0.261185628199839,0.245733936501509,0,0,0,0,0,0,0,0,0.487932798790507,0.61560529038394,0,0,0,0,0,0,0,0,0,0,0,0.919421224478927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50133791063589,0,0,0,0,0,0.087834785693126,0.130979075497713,0.364295288292542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35576626268671,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0.662045904066094,0,0.354668382198357,0,0,0,0,0.134710672069688,0.163461903113459,0.151357427644931,0,0,0.312160076830321,0,0,0,0.323745888736263,0,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0.179389635688862,0,0.423863802319124,0.300091096084402,0,0.257640540045629,0.37223371266318,0.168776332241266,0,0,0.0920498986422993,0,1.42003837006646,0.403008392910561,0.339121184620975,0.193260853163297,0.545492241181669,0.286804595389004,0,0,0.116193942869518,0,0.504641701751257,0,0,0.643240938192885,0,0,0.721879481669586,0,0.168584690078102,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0.100528972411631,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283550194484773,0.358234090811393,0,0.383382679165211,0,0,0,0,0,1.58744735730423,3.4378958300245,2.34434894420094,1.71072446022705,1.7480673759565,0,4.0015700568281,0.224262168690721,0,0.07333828582095,0,3.57656445851882,0.845302752556,0,0,0,0,0.266422179016099,0,0,0,0.325736184293735,0,0,0,0,0,0,0,0,0,0,0,0.289562613335158,0.205476322550383,0.179060963239896,0,0,0,0,0,0,0,0.335032530668698,0,0,0,0,0.12269149171914,0,0,0.207970861530807,0,0.157702415033935,0.117141414992713,0,0,0,0,0,0.173767228936166,0.195801157462741,0.343143423810856,0,0,0,0,0,0,0.496215615637554,0.460385919864187,0,0.512556597022804,0.511707249066704,0,0,0,0.355123450626254,0.0821271560138091,0,0.464841513839837,0,0,0.0920809889358963,0,0,0,0,0.15403067420883,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0,0.183138929636687,0,0,0,0,0.096670718292122,0.308097234229289,0,0,0.322260734604821,0.435050081742686,0.170453254832202,0.178064071293475,0.330569830721956,0,0.255225424989168,0.10115778085555,0,0.94443704049192,0,0,0.532306030317022,0,0,0,0,0,0,0,0,0,0,0,0.274537029736055,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202910376962704,0,0,0,0.0982490410131212,0,0,0,0.329294892959902,0,0,0.192444225451024,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.490080431962063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0.296964680832639,0.307160702099232,0,0,0.222617410045812,0,0,0,0,0,0,0,0.622079175323615,0.0898683511473268,0,0,0.197286811273867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0.307801034015188,0.227884111694002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0.103688191397247,0,0,0,0,0,0,0,0.293977192243133,0.0870592065804026,0,0,0,0,0,0,0,0,0.137041924646751,0,0,0,1.04206466326994,0,0,0,0,0,0,0,0,0,0,0.203996435272644,3.17845648891671,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.77380195455795,0,0,0.0788057072991982,0,0,0.179287339332845,0.575745591958336,0,0,0,0,0,0,0,0,0.170388021785422,0,0,0,0,0,0,0,0,0,0,0,0,0,0.638341257770182,0,0,0,0.327872630709804,0,0,0,0,0,0,0,0,0.124980407962107,1.21319294033318,2.56918800190471,0,0,0.144921028610825,0.597019211547496,0.233713309847224,0.554805861502613,0.568209015825267,0,0,1.14420034198462,0.907385542579434,1.08806040407946,0.295710299979268,0,0.449803112163605,0.310525913752519,0.829412415681711,0,0,0.150257608997218,0,0.406870733204662,1.27294061441792,0.429642228169954,0,0.398095888698616,0,0.686791410365586,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0.353378291891762,0,0,0,0,0,0,0,0.132864840313363,0,0,0.245772908753719,0,0,0,0,0,0,0,0,0,0.215649622793364,0,0,0,0,0,0,0.318004350653419,0,0,0.352675943690684,0,0,0,0,0,0,0,0,0,0.294443155503077,0.11796972334774,0,0.462102664601353,0,0,0.596748666348824,0,0,0,0.261906694481422,0.163771917510097,0,0,0,0,0,0,0.548257766857182,0,0,0.127762427639595,0,0,0,0,0,0.115233987555779,0.171488009437418,0,0,0,0,0.078493092850514,0,0,0,0,0,0.357382720883282,0,0,0,0,0,0,0.691259661814092,0,0.118332000730565,0.170426809518315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169927114687817,0,0.128915775947154,0,0,0,0,0,0,0,0.473314686579554,0,0,0,0,0.924351257262837,0,0,0,0,0,0.26721740526556,0,0,0,0,0,0,0.213233981900981,0,0,0,0,0,0,0,0,0,0,0.332660356546013,0.244209805832924,0,0,0,0,0.122241444182866,0.406896178315738,0.665756774185513,0,0 | |||
|short_description=p5@SNAI2 | |||
}} |
Revision as of 05:27, 14 September 2013
Short description: | p5@SNAI2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_SNAI2_5end |
Coexpression cluster: | NA |
Association with transcript: | -131bp_to_ENST00000396822_5end |
EntrezGene: | SNAI2 |
HGNC: | 11094 |
UniProt: | O43623 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 1.01e-47 | 10 |
melanoblast | 1.01e-47 | 10 |
light melanocyte | 1.14e-40 | 3 |
pigment cell | 4.57e-34 | 14 |
migratory neural crest cell | 4.37e-24 | 41 |
neurecto-epithelial cell | 8.37e-24 | 20 |
columnar/cuboidal epithelial cell | 1.40e-17 | 27 |
neurectodermal cell | 1.01e-16 | 59 |
dark melanocyte | 1.41e-14 | 1 |
cardiac mesenchymal cell | 6.13e-14 | 4 |
migratory trunk neural crest cell | 6.13e-14 | 4 |
ecto-epithelial cell | 6.58e-14 | 34 |
ectodermal cell | 1.27e-13 | 72 |
epithelial cell of gall bladder | 9.19e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
melanoma | 2.09e-27 | 2 |
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