FFCP PHASE1:Hg19::chr8:38663025..38663040,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=6867|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=11522|TSSclassifier=S|UniProt=|association_with_transcript=55bp_to_ENST00000522955,uc011lcc.1_5end|coexpression_cluster_id=C2|description=CAGE_peak_15_at_TACC1_5end|id=chr8:38663025..38663040,+|ontology_enrichment_celltype=CL:0000766!9.92e-57!76;CL:0000557!5.88e-49!71;CL:0000839!3.16e-46!70;CL:0002009!3.23e-46!65;CL:0002194!1.52e-44!63;CL:0000576!1.52e-44!63;CL:0000040!1.52e-44!63;CL:0000559!1.52e-44!63;CL:0000738!5.34e-41!140;CL:0002057!1.96e-40!42;CL:0000763!7.41e-39!112;CL:0000049!7.41e-39!112;CL:0000860!1.77e-36!45;CL:0000037!2.03e-32!172;CL:0000566!2.03e-32!172;CL:0002031!2.10e-31!124;CL:0002032!4.65e-30!165;CL:0000837!4.65e-30!165;CL:0002087!6.27e-30!119;CL:0000988!2.25e-29!182;CL:0002393!1.23e-09!9;CL:0002397!1.23e-09!9;CL:0000094!2.04e-09!8|ontology_enrichment_celltype_v019=CL:0000860;2.62e-48;33!CL:0002057;2.62e-48;33!CL:0000473;1.23e-47;39!CL:0000234;1.23e-47;39!CL:0000576;2.16e-40;48!CL:0000766;2.44e-39;69!CL:0000763;1.68e-16;100!CL:0000094;7.11e-16;8!CL:0000738;6.61e-13;136!CL:0000235;7.95e-12;6!CL:0000081;4.67e-11;11!CL:0002393;6.11e-11;6!CL:0002397;6.11e-11;6!CL:0000840;7.27e-11;5!CL:0002087;5.85e-10;104!CL:0000451;1.26e-09;10!CL:0000775;1.18e-07;3!CL:0000875;3.41e-07;3!CL:0002396;3.41e-07;3!CL:0000990;5.74e-07;8!CL:0000988;6.85e-07;177|ontology_enrichment_celltype_v019_2=CL:0000766,3.74e-97,72;CL:0000557,2.25e-83,67;CL:0002009,2.03e-80,61;CL:0000839,8.07e-79,66;CL:0000473,8.77e-78,48;CL:0000234,8.77e-78,48;CL:0002194,2.42e-77,59;CL:0000576,2.42e-77,59;CL:0000040,2.42e-77,59;CL:0000559,2.42e-77,59;CL:0000860,7.32e-67,42;CL:0002057,7.32e-67,42;CL:0000763,8.88e-63,108;CL:0000049,8.88e-63,108;CL:0000738,3.45e-56,136;CL:0002031,4.08e-42,120;CL:0000037,1.30e-41,168;CL:0000988,1.81e-38,177;CL:0002032,1.89e-38,161;CL:0000837,1.89e-38,161;CL:0002087,5.53e-38,115;CL:0002393,2.38e-16,9;CL:0002397,2.38e-16,9;CL:0000094,5.97e-16,8;CL:0000235,6.37e-12,6;CL:0000081,4.13e-11,11;CL:0000840,7.39e-11,5;CL:0001029,7.39e-11,5;CL:0000134,9.68e-11,354;CL:0002320,3.49e-10,361;CL:0000451,1.07e-09,10;CL:0000219,2.98e-08,386;CL:0000775,1.14e-07,3;CL:0000875,3.53e-07,3;CL:0002396,3.53e-07,3;CL:0000990,5.80e-07,8|ontology_enrichment_development_v019=CL:0002057;4.08e-48;42!CL:0000049;5.86e-17;108|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!1.89e-52!102;UBERON:0003061!1.89e-52!102;UBERON:0002193!1.03e-49!112;UBERON:0002371!1.72e-40!80;UBERON:0001474!7.21e-36!86;UBERON:0002405!4.18e-32!115;UBERON:0007023!1.27e-30!115;UBERON:0004765!9.26e-28!101;UBERON:0001434!9.26e-28!101;UBERON:0003081!7.92e-26!216;UBERON:0002204!4.99e-10!167;UBERON:0000178!1.30e-09!15;UBERON:0000179!1.30e-09!15;UBERON:0000463!1.30e-09!15;UBERON:0001049!2.39e-07!57;UBERON:0005068!2.39e-07!57;UBERON:0006241!2.39e-07!57;UBERON:0007135!2.39e-07!57;UBERON:0000479!2.59e-07!787;UBERON:0003080!3.46e-07!42;UBERON:0002780!9.12e-07!41;UBERON:0001890!9.12e-07!41;UBERON:0006240!9.12e-07!41|ontology_enrichment_uberon_v019=UBERON:0000178;1.69e-13;15!UBERON:0000179;1.69e-13;15!UBERON:0000463;1.69e-13;15!UBERON:0002390;6.06e-07;32|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.50e-83,98;UBERON:0003061,2.50e-83,98;UBERON:0002193,9.32e-74,108;UBERON:0002371,1.67e-71,76;UBERON:0001474,5.00e-65,82;UBERON:0002405,4.91e-60,93;UBERON:0004765,9.94e-58,90;UBERON:0001434,3.03e-50,100;UBERON:0003081,3.68e-45,203;UBERON:0002204,2.32e-24,167;UBERON:0000926,4.75e-22,315;UBERON:0004120,4.75e-22,315;UBERON:0006603,4.75e-22,315;UBERON:0000178,2.08e-13,15;UBERON:0000179,2.08e-13,15;UBERON:0000463,2.08e-13,15;UBERON:0002384,5.94e-10,371;UBERON:0000923,4.97e-08,560;UBERON:0010316,4.97e-08,560;UBERON:0005291,4.97e-08,560;UBERON:0006598,4.97e-08,560;UBERON:0010317,4.97e-08,560;UBERON:0002532,4.97e-08,560;UBERON:0002050,8.17e-08,564;UBERON:0005423,6.16e-07,581|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164201178899891,0.236132343941038,3.14691421479123,1.53531759238885,1.39334510984468,0,0,0,0.309868802321207,0.142169232487422,0,1.10799081706375,1.60435557976113,1.08505435357926,2.46307021663917,0.971680998056939,1.28787783817093,9.59628375945127,5.66813915533214,8.49044214157357,7.20530014407622,3.70051099219643,3.71647645074124,2.3015391385772,2.56160706529101,2.83778675866302,5.5159308917859,3.87290810150296,1.35426486594342,5.83551252582075,8.73299680185107,5.61808711112712,8.26426509401437,3.85114832491312,6.39337125799041,0.989553900560148,2.99195486432448,3.83602275479425,3.19230162491442,2.26954089876456,4.35975574296902,0.75374599577023,1.0429658368404,2.38907729175628,6.05399502633369,6.99727508376373,6.0127853613768,7.18267973460602,4.46469029926591,4.40283155567589,3.36985893439485,4.05477610672067,3.85741408072992,9.4054205434612,3.58050018958362,6.21058122799755,0,0,0,0.426730222566507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.3901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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=6867 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11522 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=55bp_to_ENST00000522955,uc011lcc.1_5end | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_15_at_TACC1_5end | |||
|id=chr8:38663025..38663040,+ | |||
|ontology_enrichment_celltype=CL:0000766!9.92e-57!76;CL:0000557!5.88e-49!71;CL:0000839!3.16e-46!70;CL:0002009!3.23e-46!65;CL:0002194!1.52e-44!63;CL:0000576!1.52e-44!63;CL:0000040!1.52e-44!63;CL:0000559!1.52e-44!63;CL:0000738!5.34e-41!140;CL:0002057!1.96e-40!42;CL:0000763!7.41e-39!112;CL:0000049!7.41e-39!112;CL:0000860!1.77e-36!45;CL:0000037!2.03e-32!172;CL:0000566!2.03e-32!172;CL:0002031!2.10e-31!124;CL:0002032!4.65e-30!165;CL:0000837!4.65e-30!165;CL:0002087!6.27e-30!119;CL:0000988!2.25e-29!182;CL:0002393!1.23e-09!9;CL:0002397!1.23e-09!9;CL:0000094!2.04e-09!8 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.62e-48;33!CL:0002057;2.62e-48;33!CL:0000473;1.23e-47;39!CL:0000234;1.23e-47;39!CL:0000576;2.16e-40;48!CL:0000766;2.44e-39;69!CL:0000763;1.68e-16;100!CL:0000094;7.11e-16;8!CL:0000738;6.61e-13;136!CL:0000235;7.95e-12;6!CL:0000081;4.67e-11;11!CL:0002393;6.11e-11;6!CL:0002397;6.11e-11;6!CL:0000840;7.27e-11;5!CL:0002087;5.85e-10;104!CL:0000451;1.26e-09;10!CL:0000775;1.18e-07;3!CL:0000875;3.41e-07;3!CL:0002396;3.41e-07;3!CL:0000990;5.74e-07;8!CL:0000988;6.85e-07;177 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,3.74e-97,72;CL:0000557,2.25e-83,67;CL:0002009,2.03e-80,61;CL:0000839,8.07e-79,66;CL:0000473,8.77e-78,48;CL:0000234,8.77e-78,48;CL:0002194,2.42e-77,59;CL:0000576,2.42e-77,59;CL:0000040,2.42e-77,59;CL:0000559,2.42e-77,59;CL:0000860,7.32e-67,42;CL:0002057,7.32e-67,42;CL:0000763,8.88e-63,108;CL:0000049,8.88e-63,108;CL:0000738,3.45e-56,136;CL:0002031,4.08e-42,120;CL:0000037,1.30e-41,168;CL:0000988,1.81e-38,177;CL:0002032,1.89e-38,161;CL:0000837,1.89e-38,161;CL:0002087,5.53e-38,115;CL:0002393,2.38e-16,9;CL:0002397,2.38e-16,9;CL:0000094,5.97e-16,8;CL:0000235,6.37e-12,6;CL:0000081,4.13e-11,11;CL:0000840,7.39e-11,5;CL:0001029,7.39e-11,5;CL:0000134,9.68e-11,354;CL:0002320,3.49e-10,361;CL:0000451,1.07e-09,10;CL:0000219,2.98e-08,386;CL:0000775,1.14e-07,3;CL:0000875,3.53e-07,3;CL:0002396,3.53e-07,3;CL:0000990,5.80e-07,8 | |||
|ontology_enrichment_development_v019=CL:0002057;4.08e-48;42!CL:0000049;5.86e-17;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.89e-52!102;UBERON:0003061!1.89e-52!102;UBERON:0002193!1.03e-49!112;UBERON:0002371!1.72e-40!80;UBERON:0001474!7.21e-36!86;UBERON:0002405!4.18e-32!115;UBERON:0007023!1.27e-30!115;UBERON:0004765!9.26e-28!101;UBERON:0001434!9.26e-28!101;UBERON:0003081!7.92e-26!216;UBERON:0002204!4.99e-10!167;UBERON:0000178!1.30e-09!15;UBERON:0000179!1.30e-09!15;UBERON:0000463!1.30e-09!15;UBERON:0001049!2.39e-07!57;UBERON:0005068!2.39e-07!57;UBERON:0006241!2.39e-07!57;UBERON:0007135!2.39e-07!57;UBERON:0000479!2.59e-07!787;UBERON:0003080!3.46e-07!42;UBERON:0002780!9.12e-07!41;UBERON:0001890!9.12e-07!41;UBERON:0006240!9.12e-07!41 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.69e-13;15!UBERON:0000179;1.69e-13;15!UBERON:0000463;1.69e-13;15!UBERON:0002390;6.06e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.50e-83,98;UBERON:0003061,2.50e-83,98;UBERON:0002193,9.32e-74,108;UBERON:0002371,1.67e-71,76;UBERON:0001474,5.00e-65,82;UBERON:0002405,4.91e-60,93;UBERON:0004765,9.94e-58,90;UBERON:0001434,3.03e-50,100;UBERON:0003081,3.68e-45,203;UBERON:0002204,2.32e-24,167;UBERON:0000926,4.75e-22,315;UBERON:0004120,4.75e-22,315;UBERON:0006603,4.75e-22,315;UBERON:0000178,2.08e-13,15;UBERON:0000179,2.08e-13,15;UBERON:0000463,2.08e-13,15;UBERON:0002384,5.94e-10,371;UBERON:0000923,4.97e-08,560;UBERON:0010316,4.97e-08,560;UBERON:0005291,4.97e-08,560;UBERON:0006598,4.97e-08,560;UBERON:0010317,4.97e-08,560;UBERON:0002532,4.97e-08,560;UBERON:0002050,8.17e-08,564;UBERON:0005423,6.16e-07,581 | |||
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| |||
|short_description=p15@TACC1 | |||
}} |
Revision as of 05:13, 14 September 2013
Short description: | p15@TACC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_15_at_TACC1_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | 55bp_to_ENST00000522955, uc011lcc.1_5end |
EntrezGene: | TACC1 |
HGNC: | 11522 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.50e-83 | 98 |
blood island | 2.50e-83 | 98 |
hemolymphoid system | 9.32e-74 | 108 |
bone marrow | 1.67e-71 | 76 |
bone element | 5.00e-65 | 82 |
immune system | 4.91e-60 | 93 |
skeletal element | 9.94e-58 | 90 |
skeletal system | 3.03e-50 | 100 |
lateral plate mesoderm | 3.68e-45 | 203 |
musculoskeletal system | 2.32e-24 | 167 |
mesoderm | 4.75e-22 | 315 |
mesoderm-derived structure | 4.75e-22 | 315 |
presumptive mesoderm | 4.75e-22 | 315 |
blood | 2.08e-13 | 15 |
haemolymphatic fluid | 2.08e-13 | 15 |
organism substance | 2.08e-13 | 15 |
connective tissue | 5.94e-10 | 371 |
germ layer | 4.97e-08 | 560 |
germ layer / neural crest | 4.97e-08 | 560 |
embryonic tissue | 4.97e-08 | 560 |
presumptive structure | 4.97e-08 | 560 |
germ layer / neural crest derived structure | 4.97e-08 | 560 |
epiblast (generic) | 4.97e-08 | 560 |
embryonic structure | 8.17e-08 | 564 |
developing anatomical structure | 6.16e-07 | 581 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.