FFCP PHASE1:Mm9::chr4:49610580..49610649,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=67063|HGNC=|MCL_coexpression_id=13|UniProt=A2AKL1,Q91YV9|association_with_transcript=92bp_to_NM_025944,uc008svx.2_5end|description=CAGE_peak_3_at_2810432L12Rik_5end|id=chr4:49610580..49610649,-|ontology_enrichment_celltype=CL:0000117!2.42e-10!23;CL:0000337!2.42e-10!23;CL:0002319!1.69e-08!43;CL:0000221!2.29e-08!44;CL:0000133!2.29e-08!44;CL:0000540!4.73e-08!33;CL:0000047!4.73e-08!33;CL:0000031!4.73e-08!33;CL:0000404!4.73e-08!33|ontology_enrichment_celltype_v019_2=CL:0000117,1.38e-10,23;CL:0000337,1.38e-10,23;CL:0000540,4.68e-08,33;CL:0000047,4.68e-08,33;CL:0000031,4.68e-08,33;CL:0000404,4.68e-08,33;CL:0002319,4.80e-08,43;CL:0000221,6.39e-08,44;CL:0000133,6.39e-08,44|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!4.26e-21!73;UBERON:0005743!4.26e-21!73;UBERON:0000073!6.68e-20!75;UBERON:0001016!6.68e-20!75;UBERON:0001049!1.21e-17!52;UBERON:0005068!1.21e-17!52;UBERON:0006241!1.21e-17!52;UBERON:0007135!1.21e-17!52;UBERON:0000955!3.78e-16!50;UBERON:0006238!3.78e-16!50;UBERON:0000033!5.60e-16!63;UBERON:0002616!9.13e-16!49;UBERON:0004121!3.58e-15!102;UBERON:0000924!3.58e-15!102;UBERON:0006601!3.58e-15!102;UBERON:0002020!4.03e-15!34;UBERON:0002346!1.65e-14!71;UBERON:0003075!1.65e-14!71;UBERON:0007284!1.65e-14!71;UBERON:0003056!2.26e-13!49;UBERON:0003080!1.62e-12!40;UBERON:0002780!5.78e-12!39;UBERON:0001890!5.78e-12!39;UBERON:0006240!5.78e-12!39;UBERON:0002791!8.49e-12!29;UBERON:0003528!8.49e-12!29;UBERON:0001893!8.49e-12!29;UBERON:0000025!2.43e-08!114;UBERON:0004111!4.14e-08!122;UBERON:0000956!8.49e-08!21;UBERON:0001869!8.49e-08!21;UBERON:0000203!8.49e-08!21;UBERON:0002619!1.51e-07!17;UBERON:0002021!4.86e-07!10;UBERON:0000411!4.86e-07!10;UBERON:0001950!4.86e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0001017,5.95e-21,73;UBERON:0001016,2.46e-19,75;UBERON:0000073,4.05e-19,54;UBERON:0001049,1.35e-17,52;UBERON:0005068,1.35e-17,52;UBERON:0006241,1.35e-17,52;UBERON:0007135,1.35e-17,52;UBERON:0010314,2.80e-17,92;UBERON:0002346,3.98e-17,64;UBERON:0003075,3.98e-17,64;UBERON:0007284,3.98e-17,64;UBERON:0004121,3.34e-16,95;UBERON:0000924,3.34e-16,95;UBERON:0006601,3.34e-16,95;UBERON:0002020,1.69e-15,34;UBERON:0000955,3.58e-14,47;UBERON:0006238,3.58e-14,47;UBERON:0002616,8.61e-14,46;UBERON:0010371,9.92e-14,73;UBERON:0003056,3.01e-13,49;UBERON:0003080,1.41e-12,40;UBERON:0003528,4.40e-12,29;UBERON:0002791,4.40e-12,29;UBERON:0001893,4.40e-12,29;UBERON:0002780,5.19e-12,39;UBERON:0001890,5.19e-12,39;UBERON:0006240,5.19e-12,39;UBERON:0000956,5.68e-08,21;UBERON:0001869,5.68e-08,21;UBERON:0000203,5.68e-08,21;UBERON:0002619,1.03e-07,17;UBERON:0000025,2.74e-07,114;UBERON:0002021,3.41e-07,10;UBERON:0000411,3.41e-07,10;UBERON:0001950,3.41e-07,10;UBERON:0004111,6.66e-07,122|phase1_expression=1.60148847104794,6.63053274514786,5.45999087267443,2.41971369045464,1.00179145989269,3.18970616632591,4.20502753071946,0,0,0,0,0,0,0,0,0.809901069559304,0,0,0,0,2.8064285749853,0,0,3.35984087866154,5.27641346454491,2.8711598205751,3.01533397311352,3.66301095566011,5.89072600314759,2.01624103807945,5.32153225572731,0,1.23012957516914,0,2.02196133825892,1.49611180822643,2.04169356262369,0,0,0,0,0,0,0.503587271902309,0.506884656097573,0.183546752161682,0.782391344348039,3.92445281484804,3.73466510648602,4.08302788055995,1.67983705950435,4.31257693094915,0,0,0,1.02903774414379,1.71920063963254,1.54701627683233,9.71119012126069,14.2827564403449,9.50747105259269,0.677689064138264,0,0,0,0,4.79360176829448,6.53171119046643,1.34796496001021,2.97013064329719,3.36519938162211,17.424710048632,17.8903518170807,2.20483438586917,2.58782771749238,1.83843757322004,18.7196997698961,9.83192503255945,8.44835932909339,6.59431438650969,7.41049913179518,3.64639359389732,11.725685958058,13.5063026407603,10.3902808488231,15.9099436155781,14.6642831223076,8.57437450796383,0.757261933331841,0.831287161174641,1.73918693221007,0.860423876981386,0,0,0,0,1.96622188184453,0,0,0,1.83096445709685,0,0,0,0,0.253359865475099,0,2.05530983494308,0.258937883647172,1.1875371125186,1.38788261412909,0.304465478312141,1.61430848079241,0.904335843315735,1.29347577849275,0.502666365318702,0.247194967734374,1.59059292611903,1.76922110389975,3.23533699894818,1.10420759230197,1.45462575940567,0,3.22058876712702,4.39838084308256,1.78819938646014,0,0,0,8.08869452786043,5.49000723382352,4.77486538028885,6.60532416730651,8.43861009190091,6.44142938134636,7.94982189032012,1.12023300235348,0.746441823660558,0.252722758433675,0.841767423545896,2.08192708740326,2.75882525320168,4.14142898552303,3.91832526372859,3.12967896096108,3.71529788826064,3.46696380870997,3.10444044886819,0.646703978798527,2.26927296201383,4.22282697993477,6.35667624039967,5.28289773528636,5.92028683087683,2.88094990971121,0.398068533636986,0,0,0,3.93538967817454,3.28336483973535,3.42117916775928,2.3674473558521,3.14822770795846,5.55361606394562,5.58081467400979,2.95100741539581,4.55384835231961,4.11399624783701,3.77585167381919,2.67527071501324,3.21639972335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| ||
|EntrezGene=67063 | |||
|HGNC= | |||
|MCL_coexpression_id=13 | |||
|UniProt=A2AKL1,Q91YV9 | |||
|association_with_transcript=92bp_to_NM_025944,uc008svx.2_5end | |||
|description=CAGE_peak_3_at_2810432L12Rik_5end | |||
|id=chr4:49610580..49610649,- | |||
|ontology_enrichment_celltype=CL:0000117!2.42e-10!23;CL:0000337!2.42e-10!23;CL:0002319!1.69e-08!43;CL:0000221!2.29e-08!44;CL:0000133!2.29e-08!44;CL:0000540!4.73e-08!33;CL:0000047!4.73e-08!33;CL:0000031!4.73e-08!33;CL:0000404!4.73e-08!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.38e-10,23;CL:0000337,1.38e-10,23;CL:0000540,4.68e-08,33;CL:0000047,4.68e-08,33;CL:0000031,4.68e-08,33;CL:0000404,4.68e-08,33;CL:0002319,4.80e-08,43;CL:0000221,6.39e-08,44;CL:0000133,6.39e-08,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!4.26e-21!73;UBERON:0005743!4.26e-21!73;UBERON:0000073!6.68e-20!75;UBERON:0001016!6.68e-20!75;UBERON:0001049!1.21e-17!52;UBERON:0005068!1.21e-17!52;UBERON:0006241!1.21e-17!52;UBERON:0007135!1.21e-17!52;UBERON:0000955!3.78e-16!50;UBERON:0006238!3.78e-16!50;UBERON:0000033!5.60e-16!63;UBERON:0002616!9.13e-16!49;UBERON:0004121!3.58e-15!102;UBERON:0000924!3.58e-15!102;UBERON:0006601!3.58e-15!102;UBERON:0002020!4.03e-15!34;UBERON:0002346!1.65e-14!71;UBERON:0003075!1.65e-14!71;UBERON:0007284!1.65e-14!71;UBERON:0003056!2.26e-13!49;UBERON:0003080!1.62e-12!40;UBERON:0002780!5.78e-12!39;UBERON:0001890!5.78e-12!39;UBERON:0006240!5.78e-12!39;UBERON:0002791!8.49e-12!29;UBERON:0003528!8.49e-12!29;UBERON:0001893!8.49e-12!29;UBERON:0000025!2.43e-08!114;UBERON:0004111!4.14e-08!122;UBERON:0000956!8.49e-08!21;UBERON:0001869!8.49e-08!21;UBERON:0000203!8.49e-08!21;UBERON:0002619!1.51e-07!17;UBERON:0002021!4.86e-07!10;UBERON:0000411!4.86e-07!10;UBERON:0001950!4.86e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,5.95e-21,73;UBERON:0001016,2.46e-19,75;UBERON:0000073,4.05e-19,54;UBERON:0001049,1.35e-17,52;UBERON:0005068,1.35e-17,52;UBERON:0006241,1.35e-17,52;UBERON:0007135,1.35e-17,52;UBERON:0010314,2.80e-17,92;UBERON:0002346,3.98e-17,64;UBERON:0003075,3.98e-17,64;UBERON:0007284,3.98e-17,64;UBERON:0004121,3.34e-16,95;UBERON:0000924,3.34e-16,95;UBERON:0006601,3.34e-16,95;UBERON:0002020,1.69e-15,34;UBERON:0000955,3.58e-14,47;UBERON:0006238,3.58e-14,47;UBERON:0002616,8.61e-14,46;UBERON:0010371,9.92e-14,73;UBERON:0003056,3.01e-13,49;UBERON:0003080,1.41e-12,40;UBERON:0003528,4.40e-12,29;UBERON:0002791,4.40e-12,29;UBERON:0001893,4.40e-12,29;UBERON:0002780,5.19e-12,39;UBERON:0001890,5.19e-12,39;UBERON:0006240,5.19e-12,39;UBERON:0000956,5.68e-08,21;UBERON:0001869,5.68e-08,21;UBERON:0000203,5.68e-08,21;UBERON:0002619,1.03e-07,17;UBERON:0000025,2.74e-07,114;UBERON:0002021,3.41e-07,10;UBERON:0000411,3.41e-07,10;UBERON:0001950,3.41e-07,10;UBERON:0004111,6.66e-07,122 | |||
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| |||
|short_description=p3@2810432L12Rik | |||
}} | |||
Revision as of 05:12, 14 September 2013
| Short description: | p3@2810432L12Rik |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_3_at_2810432L12Rik_5end |
| Coexpression cluster: | MCL_coexpression_mm9:13 |
| Association with transcript: | 92bp_to_NM_025944, uc008svx.2_5end |
| EntrezGene: | 2810432L12Rik |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
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CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| CNS neuron (sensu Vertebrata) | 1.38e-10 | 23 |
| neuroblast (sensu Vertebrata) | 1.38e-10 | 23 |
| neuron | 4.68e-08 | 33 |
| neuronal stem cell | 4.68e-08 | 33 |
| neuroblast | 4.68e-08 | 33 |
| electrically signaling cell | 4.68e-08 | 33 |
| neural cell | 4.80e-08 | 43 |
| ectodermal cell | 6.39e-08 | 44 |
| neurectodermal cell | 6.39e-08 | 44 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
