FFCP PHASE1:Mm9::chr4:43397210..43397222,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=100213|HGNC=|UniProt=B0R003|association_with_transcript=6bp_to_ENSMUST00000136360_5end|description=CAGE_peak_19_at_Rusc2_5end|id=chr4:43397210..43397222,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0005631,5.70e-27,3;UBERON:0000478,5.70e-27,3;UBERON:0000158,5.70e-27,3;UBERON:0001987,8.62e-19,2;UBERON:0003124,8.62e-19,2;UBERON:0004340,8.62e-19,2;UBERON:0001723,3.04e-10,1;UBERON:0001033,3.04e-10,1;UBERON:0010056,3.04e-10,1;UBERON:0000305,6.88e-10,1;UBERON:0005795,6.92e-10,4;UBERON:0000995,6.92e-10,4;UBERON:0003975,4.35e-08,5|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439372365468944,0.194429899074283,0,0,0,0,0,0,0.85960031981627,0.515672092277442,0,0,0,0,0,1.3498495759221,0.988866362566974,0.7104801149461,0,0,0,0,0,0,0,0,0,0,1.10115880999389,0.510749352340751,0.46081959976873,0,0,0,0.279182999001381,0,0.30559649555362,0,0,0,0.908714319998209,2.87171928405785,0.289864488701678,0,3.39985666853875,0,0,0,0,0,0,0,0,0,0,0,0.649473123033642,0,0,0,0,0,0,0,0,0,0.117588707135705,0,1.23597483867187,0.144599356919912,0,0,0,0,0,0,0,0,0,0,0,0.149790639404823,0.457500602818626,0,0,0,0.41557608911912,0.162241263067758,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19496408711912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179397413521912,0,1.47802552133284,0,0,0,0,0,0.714130922658041,0.390267295715598,0,0.221464689648775,0.159454768657487,0.491589944147214,0.172684981865896,1.01254341007058,0,0,0,0,0.481651769963376,0.703270119553219,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.304464949114599,1.64270195644597,2.75381692122966,0,0.16488625294148,0.322928853391811,0.180938774784468,0.238744688006273,0.164140899745061,0,0.556275906031529,0,0,0,0,0,0,0,0,0,0.954670618015114,0,0,0,0.418176592028937,0.218362563746178,0.404593039154462,0.330613822901344,0.26175594198403,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.81384306892169,0,0.179427713218951,0.839423081820392,0.19318959403219,0.563047426353546,0,0.643105137237198,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0,0,0,0.252697211763798,0.25347929989024,0,0.0936415074698824,0,0.0574354689556133,0,0,0,0,0,0,0,0,0,0.0941093804153306,0.0846146078916765,0,0,0,0.561142271657738,0.237270036248348,0.0985044823755635,0,0,0.385813221962283,0,0.233931608445408,0.429742108096597,0,0.441182838239031,0|short_description=p19@Rusc2}} | ||
|EntrezGene=100213 | |||
|HGNC= | |||
|UniProt=B0R003 | |||
|association_with_transcript=6bp_to_ENSMUST00000136360_5end | |||
|description=CAGE_peak_19_at_Rusc2_5end | |||
|id=chr4:43397210..43397222,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,5.70e-27,3;UBERON:0000478,5.70e-27,3;UBERON:0000158,5.70e-27,3;UBERON:0001987,8.62e-19,2;UBERON:0003124,8.62e-19,2;UBERON:0004340,8.62e-19,2;UBERON:0001723,3.04e-10,1;UBERON:0001033,3.04e-10,1;UBERON:0010056,3.04e-10,1;UBERON:0000305,6.88e-10,1;UBERON:0005795,6.92e-10,4;UBERON:0000995,6.92e-10,4;UBERON:0003975,4.35e-08,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439372365468944,0.194429899074283,0,0,0,0,0,0,0.85960031981627,0.515672092277442,0,0,0,0,0,1.3498495759221,0.988866362566974,0.7104801149461,0,0,0,0,0,0,0,0,0,0,1.10115880999389,0.510749352340751,0.46081959976873,0,0,0,0.279182999001381,0,0.30559649555362,0,0,0,0.908714319998209,2.87171928405785,0.289864488701678,0,3.39985666853875,0,0,0,0,0,0,0,0,0,0,0,0.649473123033642,0,0,0,0,0,0,0,0,0,0.117588707135705,0,1.23597483867187,0.144599356919912,0,0,0,0,0,0,0,0,0,0,0,0.149790639404823,0.457500602818626,0,0,0,0.41557608911912,0.162241263067758,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19496408711912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179397413521912,0,1.47802552133284,0,0,0,0,0,0.714130922658041,0.390267295715598,0,0.221464689648775,0.159454768657487,0.491589944147214,0.172684981865896,1.01254341007058,0,0,0,0,0.481651769963376,0.703270119553219,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.304464949114599,1.64270195644597,2.75381692122966,0,0.16488625294148,0.322928853391811,0.180938774784468,0.238744688006273,0.164140899745061,0,0.556275906031529,0,0,0,0,0,0,0,0,0,0.954670618015114,0,0,0,0.418176592028937,0.218362563746178,0.404593039154462,0.330613822901344,0.26175594198403,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.81384306892169,0,0.179427713218951,0.839423081820392,0.19318959403219,0.563047426353546,0,0.643105137237198,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0,0,0,0.252697211763798,0.25347929989024,0,0.0936415074698824,0,0.0574354689556133,0,0,0,0,0,0,0,0,0,0.0941093804153306,0.0846146078916765,0,0,0,0.561142271657738,0.237270036248348,0.0985044823755635,0,0,0.385813221962283,0,0.233931608445408,0.429742108096597,0,0.441182838239031,0 | |||
|short_description=p19@Rusc2 | |||
}} |
Revision as of 05:00, 14 September 2013
Short description: | p19@Rusc2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_19_at_Rusc2_5end |
Coexpression cluster: | NA |
Association with transcript: | 6bp_to_ENSMUST00000136360_5end |
EntrezGene: | Rusc2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 5.70e-27 | 3 |
extraembryonic structure | 5.70e-27 | 3 |
membranous layer | 5.70e-27 | 3 |
placenta | 8.62e-19 | 2 |
chorion | 8.62e-19 | 2 |
allantois | 8.62e-19 | 2 |
tongue | 3.04e-10 | 1 |
gustatory system | 3.04e-10 | 1 |
future tongue | 3.04e-10 | 1 |
amnion | 6.88e-10 | 1 |
embryonic uterus | 6.92e-10 | 4 |
uterus | 6.92e-10 | 4 |
internal female genitalia | 4.35e-08 | 5 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.