FFCP PHASE1:Mm9::chr4:154956844..154956853,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=192185|HGNC=|MCL_coexpression_id=28|UniProt=Q3TNZ1|association_with_transcript=64bp_to_uc008wdv.2_5end|description=CAGE_peak_8_at_Nadk_5end|id=chr4:154956844..154956853,+|ontology_enrichment_celltype=CL:0000068!1.68e-07!3;CL:0002202!1.68e-07!3;CL:0000069!1.68e-07!3;CL:0002632!1.68e-07!3;CL:0002368!1.68e-07!3;CL:0000307!1.68e-07!3;CL:0000377!1.68e-07!3|ontology_enrichment_celltype_v019_2=CL:0000068,4.72e-23,3;CL:0002202,4.72e-23,3;CL:0000069,4.72e-23,3;CL:0002632,4.72e-23,3;CL:0002368,4.72e-23,3;CL:0000307,4.72e-23,3;CL:0000377,4.72e-23,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003126!1.68e-07!3;UBERON:0001005!1.68e-07!3;UBERON:0007196!1.68e-07!3;UBERON:0001558!1.68e-07!3|ontology_enrichment_uberon_v019_2=UBERON:0003126,4.72e-23,3;UBERON:0001005,4.72e-23,3;UBERON:0007196,4.72e-23,3;UBERON:0001558,4.72e-23,3;UBERON:0001153,5.23e-09,1;UBERON:0001045,5.23e-09,1;UBERON:0001044,2.44e-08,1;UBERON:0001736,2.44e-08,1;UBERON:0003293,2.44e-08,1;UBERON:0003294,2.44e-08,1;UBERON:0001829,2.44e-08,1;UBERON:0010047,2.44e-08,1;UBERON:0000167,2.44e-08,1;UBERON:0006298,2.44e-08,1;UBERON:0001255,2.89e-08,1;UBERON:0001556,2.89e-08,1|phase1_expression=0,0,0.454999239389536,0.30246421130683,0,0,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0.430761996159075,0.215471232685889,1.33016393619462,0.504060259519861,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0.0755715601067855,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,2.59789249213457,2.02687892380079,2.52762222507392,0.11418387971906,0,0,0.173485326766136,0,0,0.150722640552623,0,0.502666365318702,0,0,0,0,0,0,3.72783522436244,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0.252722758433675,9.25944165900485,0,0,0,0,0,0,0,1.29351685369508,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32167513193519,0,0,0,0,0,0,0,0.949058123089023,0,0.251335208800269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.21183207086382,0,0.65954501176592,0,0.0603129249281559,0.238744688006273,0.328281799490123,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.418176592028937,0.655087691238533,1.48350781023303,0.991841468704031,0.523511883968059,2.59229946583586,1.24267862617385,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221985953374065,0,0.167884616364078,1.15913756419314,0.375364950902364,0.183151624267265,0.428736758158132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118635018124174,0,0,0,0,0,0,0,0,0,0|short_description=p8@Nadk}} | ||
|EntrezGene=192185 | |||
|HGNC= | |||
|MCL_coexpression_id=28 | |||
|UniProt=Q3TNZ1 | |||
|association_with_transcript=64bp_to_uc008wdv.2_5end | |||
|description=CAGE_peak_8_at_Nadk_5end | |||
|id=chr4:154956844..154956853,+ | |||
|ontology_enrichment_celltype=CL:0000068!1.68e-07!3;CL:0002202!1.68e-07!3;CL:0000069!1.68e-07!3;CL:0002632!1.68e-07!3;CL:0002368!1.68e-07!3;CL:0000307!1.68e-07!3;CL:0000377!1.68e-07!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000068,4.72e-23,3;CL:0002202,4.72e-23,3;CL:0000069,4.72e-23,3;CL:0002632,4.72e-23,3;CL:0002368,4.72e-23,3;CL:0000307,4.72e-23,3;CL:0000377,4.72e-23,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003126!1.68e-07!3;UBERON:0001005!1.68e-07!3;UBERON:0007196!1.68e-07!3;UBERON:0001558!1.68e-07!3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003126,4.72e-23,3;UBERON:0001005,4.72e-23,3;UBERON:0007196,4.72e-23,3;UBERON:0001558,4.72e-23,3;UBERON:0001153,5.23e-09,1;UBERON:0001045,5.23e-09,1;UBERON:0001044,2.44e-08,1;UBERON:0001736,2.44e-08,1;UBERON:0003293,2.44e-08,1;UBERON:0003294,2.44e-08,1;UBERON:0001829,2.44e-08,1;UBERON:0010047,2.44e-08,1;UBERON:0000167,2.44e-08,1;UBERON:0006298,2.44e-08,1;UBERON:0001255,2.89e-08,1;UBERON:0001556,2.89e-08,1 | |||
|phase1_expression=0,0,0.454999239389536,0.30246421130683,0,0,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0.430761996159075,0.215471232685889,1.33016393619462,0.504060259519861,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0.0755715601067855,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,2.59789249213457,2.02687892380079,2.52762222507392,0.11418387971906,0,0,0.173485326766136,0,0,0.150722640552623,0,0.502666365318702,0,0,0,0,0,0,3.72783522436244,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0.252722758433675,9.25944165900485,0,0,0,0,0,0,0,1.29351685369508,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32167513193519,0,0,0,0,0,0,0,0.949058123089023,0,0.251335208800269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.21183207086382,0,0.65954501176592,0,0.0603129249281559,0.238744688006273,0.328281799490123,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.418176592028937,0.655087691238533,1.48350781023303,0.991841468704031,0.523511883968059,2.59229946583586,1.24267862617385,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221985953374065,0,0.167884616364078,1.15913756419314,0.375364950902364,0.183151624267265,0.428736758158132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118635018124174,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p8@Nadk | |||
}} |
Revision as of 04:41, 14 September 2013
Short description: | p8@Nadk |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_8_at_Nadk_5end |
Coexpression cluster: | MCL_coexpression_mm9:28 |
Association with transcript: | 64bp_to_uc008wdv.2_5end |
EntrezGene: | Nadk |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
duct epithelial cell | 4.72e-23 | 3 |
epithelial cell of tracheobronchial tree | 4.72e-23 | 3 |
branched duct epithelial cell | 4.72e-23 | 3 |
epithelial cell of lower respiratory tract | 4.72e-23 | 3 |
respiratory epithelial cell | 4.72e-23 | 3 |
tracheal epithelial cell | 4.72e-23 | 3 |
tracheoblast | 4.72e-23 | 3 |
Ontology term | p-value | n |
---|---|---|
trachea | 4.72e-23 | 3 |
respiratory airway | 4.72e-23 | 3 |
tracheobronchial tree | 4.72e-23 | 3 |
lower respiratory tract | 4.72e-23 | 3 |
caecum | 5.23e-09 | 1 |
midgut | 5.23e-09 | 1 |
saliva-secreting gland | 2.44e-08 | 1 |
submandibular gland | 2.44e-08 | 1 |
gland of oral region | 2.44e-08 | 1 |
gland of foregut | 2.44e-08 | 1 |
major salivary gland | 2.44e-08 | 1 |
oral gland | 2.44e-08 | 1 |
oral cavity | 2.44e-08 | 1 |
submandibular gland primordium | 2.44e-08 | 1 |
urinary bladder | 2.89e-08 | 1 |
lower urinary tract | 2.89e-08 | 1 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.