FFCP PHASE1:Hg19::chr8:19540086..19540119,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=55790|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=24290|TSSclassifier=W|UniProt=Q8TDX6|association_with_transcript=0bp_to_ENST00000332246,NM_018371,uc011kyo.1_5end|description=CAGE_peak_7_at_CSGALNACT1_5end|id=chr8:19540086..19540119,-|ontology_enrichment_celltype=CL:0000359!6.01e-12!32;CL:0000192!2.69e-08!42;CL:0000514!2.69e-08!42;CL:0002595!6.03e-08!5|ontology_enrichment_celltype_v019=CL:0000359;4.63e-21;32!CL:0002595;2.38e-19;5!CL:0000192;8.86e-13;43!CL:0002552;4.79e-11;5!CL:0002539;2.43e-09;10!CL:0002593;6.58e-09;2!CL:1000306;1.55e-08;4!CL:0002547;1.55e-08;4!CL:0002589;8.48e-08;2|ontology_enrichment_celltype_v019_2=CL:0000359,2.29e-22,32;CL:0002595,2.39e-19,5;CL:0000192,1.09e-15,43;CL:0000514,1.09e-15,43;CL:0000187,1.77e-11,55;CL:0002552,4.93e-11,5;CL:0000680,1.06e-10,58;CL:0000056,1.06e-10,58;CL:0000355,1.06e-10,58;CL:0000393,5.28e-10,61;CL:0000211,5.28e-10,61;CL:0002539,2.52e-09,10;CL:0002593,6.59e-09,2;CL:1000306,1.94e-08,4;CL:0002547,1.94e-08,4;CL:0000057,8.38e-08,76;CL:0000048,1.05e-07,427;CL:0002589,1.14e-07,2;CL:0000723,1.87e-07,433;CL:0000034,3.92e-07,441|ontology_enrichment_development_v019=CL:0000514;8.86e-13;43|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004573!7.65e-12!33;UBERON:0004571!7.65e-12!33;UBERON:0004872!2.80e-11!84;UBERON:0001637!5.40e-11!42;UBERON:0003509!5.40e-11!42;UBERON:0004572!5.40e-11!42;UBERON:0001981!2.77e-09!60;UBERON:0007500!2.77e-09!60;UBERON:0004537!2.77e-09!60;UBERON:0006965!2.77e-09!60;UBERON:0003914!3.55e-09!118;UBERON:0003834!6.03e-08!5;UBERON:0001533!6.03e-08!5;UBERON:0001009!2.47e-07!113;UBERON:0004535!2.77e-07!110;UBERON:0000055!5.35e-07!69;UBERON:0003081!5.77e-07!216|ontology_enrichment_uberon_v019=UBERON:0004573;7.95e-26;33!UBERON:0004571;7.95e-26;33!UBERON:0003834;2.38e-19;5!UBERON:0001533;2.38e-19;5!UBERON:0001637;1.64e-16;42!UBERON:0003509;1.64e-16;42!UBERON:0004572;1.64e-16;42!UBERON:0003513;1.03e-13;7!UBERON:0000947;5.43e-10;21!UBERON:0010191;5.43e-10;21!UBERON:0004237;2.43e-09;10!UBERON:0004695;2.43e-09;10!UBERON:0002111;2.43e-09;10!UBERON:0004178;2.43e-09;10!UBERON:0007500;4.82e-09;56!UBERON:0001981;4.82e-09;56!UBERON:0004537;4.82e-09;56!UBERON:0002456;6.58e-09;2!UBERON:0004797;1.55e-08;4!UBERON:0000415;1.55e-08;4!UBERON:0007240;1.55e-08;4!UBERON:0005742;1.55e-08;4!UBERON:0005734;1.55e-08;4!UBERON:0004664;1.55e-08;4!UBERON:0004663;1.55e-08;4!UBERON:0001529;8.48e-08;2!UBERON:0007204;8.48e-08;2!UBERON:0001828;6.32e-07;8|ontology_enrichment_uberon_v019_2=UBERON:0004573,6.76e-28,33;UBERON:0004571,6.76e-28,33;UBERON:0001637,1.10e-23,42;UBERON:0003509,1.10e-23,42;UBERON:0004572,1.10e-23,42;UBERON:0003834,2.39e-19,5;UBERON:0001533,2.39e-19,5;UBERON:0004872,2.41e-17,83;UBERON:0007500,1.54e-15,59;UBERON:0001981,1.54e-15,59;UBERON:0004537,1.54e-15,59;UBERON:0006965,1.54e-15,59;UBERON:0003513,1.03e-13,7;UBERON:0003914,5.08e-13,117;UBERON:0000055,6.82e-13,68;UBERON:0002049,1.11e-10,78;UBERON:0007798,1.11e-10,78;UBERON:0004535,1.60e-10,109;UBERON:0001009,4.24e-10,112;UBERON:0000947,6.21e-10,21;UBERON:0010191,6.21e-10,21;UBERON:0001134,8.70e-10,62;UBERON:0002036,8.70e-10,62;UBERON:0003082,8.70e-10,62;UBERON:0002385,2.26e-09,64;UBERON:0001015,2.26e-09,64;UBERON:0000383,2.26e-09,64;UBERON:0004237,2.52e-09,10;UBERON:0004695,2.52e-09,10;UBERON:0002111,2.52e-09,10;UBERON:0004178,2.52e-09,10;UBERON:0002456,6.59e-09,2;UBERON:0000415,1.94e-08,4;UBERON:0007240,1.94e-08,4;UBERON:0005742,1.94e-08,4;UBERON:0005734,1.94e-08,4;UBERON:0004664,1.94e-08,4;UBERON:0004663,1.94e-08,4;UBERON:0003081,2.05e-08,203;UBERON:0002329,4.09e-08,71;UBERON:0003059,4.09e-08,71;UBERON:0007282,4.09e-08,71;UBERON:0004290,4.09e-08,71;UBERON:0009618,4.09e-08,71;UBERON:0005256,5.77e-08,122;UBERON:0003077,5.91e-08,72;UBERON:0007285,5.91e-08,72;UBERON:0007524,8.43e-08,73;UBERON:0001529,1.14e-07,2;UBERON:0007204,1.14e-07,2;UBERON:0003104,4.05e-07,160;UBERON:0009142,4.05e-07,160;UBERON:0007503,4.33e-07,78;UBERON:0001828,6.43e-07,8|phase1_expression=0,0,0.140954404095971,0,0.446961094427288,0,0,0,0,0,0.697801167972428,0,0,0.123766352960047,0,0,0,0,0.487932798790507,0,0,0,0,0,0,0,0,0,0.393364276848904,0.767658796194425,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0.290796477559129,0,0.727752183563449,0,0,0.309706370895104,0,0,0.236482229888585,0.344745680736619,0,0,0.188242339542605,0,2.02251136000576,0.306083892370903,0,0.639337125799041,0,0,0,0,0,0,0,0,0,0,0,0.316462387440884,0,0,0,0,0.450530678524519,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0,0,0,0,0.722878304769133,0,0.869079113764942,0,0.973269740605272,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.27121669744253,0,0,0.496971951695318,0.633152558322899,5.42877641334197,2.86836620748814,1.06400514659507,0,0,0,0,0.538842688278752,0,0,0,0,0,0,0,0,0,0,3.0623125688234,0,1.34323515528495,1.188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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=55790 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24290 | |||
|TSSclassifier=W | |||
|UniProt=Q8TDX6 | |||
|association_with_transcript=0bp_to_ENST00000332246,NM_018371,uc011kyo.1_5end | |||
|description=CAGE_peak_7_at_CSGALNACT1_5end | |||
|id=chr8:19540086..19540119,- | |||
|ontology_enrichment_celltype=CL:0000359!6.01e-12!32;CL:0000192!2.69e-08!42;CL:0000514!2.69e-08!42;CL:0002595!6.03e-08!5 | |||
|ontology_enrichment_celltype_v019=CL:0000359;4.63e-21;32!CL:0002595;2.38e-19;5!CL:0000192;8.86e-13;43!CL:0002552;4.79e-11;5!CL:0002539;2.43e-09;10!CL:0002593;6.58e-09;2!CL:1000306;1.55e-08;4!CL:0002547;1.55e-08;4!CL:0002589;8.48e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,2.29e-22,32;CL:0002595,2.39e-19,5;CL:0000192,1.09e-15,43;CL:0000514,1.09e-15,43;CL:0000187,1.77e-11,55;CL:0002552,4.93e-11,5;CL:0000680,1.06e-10,58;CL:0000056,1.06e-10,58;CL:0000355,1.06e-10,58;CL:0000393,5.28e-10,61;CL:0000211,5.28e-10,61;CL:0002539,2.52e-09,10;CL:0002593,6.59e-09,2;CL:1000306,1.94e-08,4;CL:0002547,1.94e-08,4;CL:0000057,8.38e-08,76;CL:0000048,1.05e-07,427;CL:0002589,1.14e-07,2;CL:0000723,1.87e-07,433;CL:0000034,3.92e-07,441 | |||
|ontology_enrichment_development_v019=CL:0000514;8.86e-13;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004573!7.65e-12!33;UBERON:0004571!7.65e-12!33;UBERON:0004872!2.80e-11!84;UBERON:0001637!5.40e-11!42;UBERON:0003509!5.40e-11!42;UBERON:0004572!5.40e-11!42;UBERON:0001981!2.77e-09!60;UBERON:0007500!2.77e-09!60;UBERON:0004537!2.77e-09!60;UBERON:0006965!2.77e-09!60;UBERON:0003914!3.55e-09!118;UBERON:0003834!6.03e-08!5;UBERON:0001533!6.03e-08!5;UBERON:0001009!2.47e-07!113;UBERON:0004535!2.77e-07!110;UBERON:0000055!5.35e-07!69;UBERON:0003081!5.77e-07!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;7.95e-26;33!UBERON:0004571;7.95e-26;33!UBERON:0003834;2.38e-19;5!UBERON:0001533;2.38e-19;5!UBERON:0001637;1.64e-16;42!UBERON:0003509;1.64e-16;42!UBERON:0004572;1.64e-16;42!UBERON:0003513;1.03e-13;7!UBERON:0000947;5.43e-10;21!UBERON:0010191;5.43e-10;21!UBERON:0004237;2.43e-09;10!UBERON:0004695;2.43e-09;10!UBERON:0002111;2.43e-09;10!UBERON:0004178;2.43e-09;10!UBERON:0007500;4.82e-09;56!UBERON:0001981;4.82e-09;56!UBERON:0004537;4.82e-09;56!UBERON:0002456;6.58e-09;2!UBERON:0004797;1.55e-08;4!UBERON:0000415;1.55e-08;4!UBERON:0007240;1.55e-08;4!UBERON:0005742;1.55e-08;4!UBERON:0005734;1.55e-08;4!UBERON:0004664;1.55e-08;4!UBERON:0004663;1.55e-08;4!UBERON:0001529;8.48e-08;2!UBERON:0007204;8.48e-08;2!UBERON:0001828;6.32e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004573,6.76e-28,33;UBERON:0004571,6.76e-28,33;UBERON:0001637,1.10e-23,42;UBERON:0003509,1.10e-23,42;UBERON:0004572,1.10e-23,42;UBERON:0003834,2.39e-19,5;UBERON:0001533,2.39e-19,5;UBERON:0004872,2.41e-17,83;UBERON:0007500,1.54e-15,59;UBERON:0001981,1.54e-15,59;UBERON:0004537,1.54e-15,59;UBERON:0006965,1.54e-15,59;UBERON:0003513,1.03e-13,7;UBERON:0003914,5.08e-13,117;UBERON:0000055,6.82e-13,68;UBERON:0002049,1.11e-10,78;UBERON:0007798,1.11e-10,78;UBERON:0004535,1.60e-10,109;UBERON:0001009,4.24e-10,112;UBERON:0000947,6.21e-10,21;UBERON:0010191,6.21e-10,21;UBERON:0001134,8.70e-10,62;UBERON:0002036,8.70e-10,62;UBERON:0003082,8.70e-10,62;UBERON:0002385,2.26e-09,64;UBERON:0001015,2.26e-09,64;UBERON:0000383,2.26e-09,64;UBERON:0004237,2.52e-09,10;UBERON:0004695,2.52e-09,10;UBERON:0002111,2.52e-09,10;UBERON:0004178,2.52e-09,10;UBERON:0002456,6.59e-09,2;UBERON:0000415,1.94e-08,4;UBERON:0007240,1.94e-08,4;UBERON:0005742,1.94e-08,4;UBERON:0005734,1.94e-08,4;UBERON:0004664,1.94e-08,4;UBERON:0004663,1.94e-08,4;UBERON:0003081,2.05e-08,203;UBERON:0002329,4.09e-08,71;UBERON:0003059,4.09e-08,71;UBERON:0007282,4.09e-08,71;UBERON:0004290,4.09e-08,71;UBERON:0009618,4.09e-08,71;UBERON:0005256,5.77e-08,122;UBERON:0003077,5.91e-08,72;UBERON:0007285,5.91e-08,72;UBERON:0007524,8.43e-08,73;UBERON:0001529,1.14e-07,2;UBERON:0007204,1.14e-07,2;UBERON:0003104,4.05e-07,160;UBERON:0009142,4.05e-07,160;UBERON:0007503,4.33e-07,78;UBERON:0001828,6.43e-07,8 | |||
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|short_description=p7@CSGALNACT1 | |||
}} |
Revision as of 04:28, 14 September 2013
Short description: | p7@CSGALNACT1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_CSGALNACT1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000332246, NM_018371, uc011kyo.1_5end |
EntrezGene: | CSGALNACT1 |
HGNC: | 24290 |
UniProt: | Q8TDX6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 2.29e-22 | 32 |
smooth muscle cell of the subclavian artery | 2.39e-19 | 5 |
smooth muscle cell | 1.09e-15 | 43 |
smooth muscle myoblast | 1.09e-15 | 43 |
muscle cell | 1.77e-11 | 55 |
fibroblast of gingiva | 4.93e-11 | 5 |
muscle precursor cell | 1.06e-10 | 58 |
myoblast | 1.06e-10 | 58 |
multi-potent skeletal muscle stem cell | 1.06e-10 | 58 |
electrically responsive cell | 5.28e-10 | 61 |
electrically active cell | 5.28e-10 | 61 |
aortic smooth muscle cell | 2.52e-09 | 10 |
smooth muscle cell of the internal thoracic artery | 6.59e-09 | 2 |
fibroblast of tunica adventitia of artery | 1.94e-08 | 4 |
fibroblast of the aortic adventitia | 1.94e-08 | 4 |
fibroblast | 8.38e-08 | 76 |
multi fate stem cell | 1.05e-07 | 427 |
smooth muscle cell of the brachiocephalic vasculature | 1.14e-07 | 2 |
somatic stem cell | 1.87e-07 | 433 |
stem cell | 3.92e-07 | 441 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.