FFCP PHASE1:Hg19::chr8:136469950..136469961,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=10656|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=18117|TSSclassifier=S|UniProt=O75525|association_with_transcript=234bp_to_NM_006558,uc003yuv.2,uc003yuw.2_5end|description=CAGE_peak_6_at_KHDRBS3_5end|id=chr8:136469950..136469961,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000047;1.70e-36;2!CL:0002567;2.88e-07;3|ontology_enrichment_celltype_v019_2=CL:0000047,6.63e-10,8;CL:0002567,2.79e-07,3|ontology_enrichment_development_v019=UBERON:0009117;2.77e-08;10!UBERON:0005564;2.77e-08;10!UBERON:0004161;1.64e-07;11|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!9.08e-20!115;UBERON:0001017!1.11e-12!82;UBERON:0005743!1.96e-12!86;UBERON:0001893!1.54e-11!34;UBERON:0002780!5.53e-11!41;UBERON:0001890!5.53e-11!41;UBERON:0006240!5.53e-11!41;UBERON:0001049!7.42e-11!57;UBERON:0005068!7.42e-11!57;UBERON:0006241!7.42e-11!57;UBERON:0007135!7.42e-11!57;UBERON:0002619!1.02e-10!22;UBERON:0003080!1.37e-10!42;UBERON:0002791!1.58e-10!33;UBERON:0000073!2.37e-10!94;UBERON:0001016!2.37e-10!94;UBERON:0000956!2.52e-10!25;UBERON:0000203!2.52e-10!25;UBERON:0001869!6.97e-10!32;UBERON:0000955!2.38e-09!69;UBERON:0006238!2.38e-09!69;UBERON:0002616!2.94e-09!59;UBERON:0002020!8.14e-09!34;UBERON:0003528!8.14e-09!34;UBERON:0001950!8.89e-09!20;UBERON:0002346!3.60e-08!90;UBERON:0000473!1.99e-07!8;UBERON:0003056!4.82e-07!61;UBERON:0003135!6.13e-07!11|ontology_enrichment_uberon_v019=UBERON:0002021;1.75e-15;5!UBERON:0000473;3.94e-10;8!UBERON:0003135;1.31e-07;11|ontology_enrichment_uberon_v019_2=UBERON:0002021,2.17e-15,5;UBERON:0000473,4.03e-10,8;UBERON:0003135,1.33e-07,11|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204000691244253,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.42311289670768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.402829317109147,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0.117434498643765,0,0,0.204154171254893,0,0.103325781175765,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0,0,0,0,0.103052529238439,0,0,0,0,0,0,0.161646056818812,0,0,0,0,0,0,0,0,0,0,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414656231081544,1.72943944100354,0.75745460055828,0,0.381988425558278,1.17217447210047,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01637849688985,1.30139853857622,0,0.167516265334349,0,0,0,0,0,0.500170521059677,0,0,0,0,0,0.300946099727719,0,0,0,0,0.0868836144680828,0,0,0,0,0,0.303127571446259,0,0,0.248107807818777,0,0.280660094433074,0,0,0.160853921143607,0,0.154209693802656,0,0.0821271560138091,0.519254429183621,0,0,0,0.0920809889358963,0,0,0.393373244878272,0,0.15403067420883,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308097234229289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.372158369359667,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0.202910376962704,0,0,0,0,0,0.354761064070598,0,0.329294892959902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159426272728822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0.111308705022906,0,0,0.19924798825107,0,0,0.306806047506464,0,0,0,0,0,0.295930216910801,0,0,0,0.927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.384751292518985,0,0,0,0,0,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0.619202951523374,0,0,0.123563938946503,0,0.337005664903385,0,0,0,0,0,0,0,0.91821828489147,0.063186579628488,0.450970258243478,0,0,0,0,0,0,0,0,0,0,0.698906672968121,0,0,0,0,0.193978032976839,0,0,0,0.19871461170299,0.886351143382302,0,0,0.640358984218058,0,0.144090417154106,0,0.343189995723929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.429226048136571,0.223171457441873,0,0,1.16495949527454,0,0,0,0,0,0.795229689809303,0.136203406111576,0,0,0.415440338029185,0,0,0.303747783290123,0,0.315222829196793,0.157363764404994,0.105600336519406,0,0,0,0,0,0,0,0,0,0,0,0,0,2.65013777824443,0,0,0,0,0.213574825135389,0.157204305099666,0.414239055347196,0,0,0,0,0,0.2506898940227,0.612691153526923,0,0,0,0.366078794705889,0.250381861413,0,0,0.124192805882767,0,0,0.606596470166591,0.285465333544967,0,0,0.144921028610825,0,0.233713309847224,0,0,0,0,0,0.151230923763239,0,0.147855149989634,0.159296767163702,0.449803112163605,0,0,0,0,0,0,0,0.363697318405119,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0.106691729694141,0,0,0,0,0,0,0,0,0,0,0.212574920101683,0.867550349813015,0,0,0,0,0.352675943690684,0.3062454773532,0.513833800771676,0,0,5.12790910601888,1.00828678488687,0.691572524642179,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0.607838261565552,0,0,0.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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=10656 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18117 | |||
|TSSclassifier=S | |||
|UniProt=O75525 | |||
|association_with_transcript=234bp_to_NM_006558,uc003yuv.2,uc003yuw.2_5end | |||
|description=CAGE_peak_6_at_KHDRBS3_5end | |||
|id=chr8:136469950..136469961,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000047;1.70e-36;2!CL:0002567;2.88e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,6.63e-10,8;CL:0002567,2.79e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0009117;2.77e-08;10!UBERON:0005564;2.77e-08;10!UBERON:0004161;1.64e-07;11 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!9.08e-20!115;UBERON:0001017!1.11e-12!82;UBERON:0005743!1.96e-12!86;UBERON:0001893!1.54e-11!34;UBERON:0002780!5.53e-11!41;UBERON:0001890!5.53e-11!41;UBERON:0006240!5.53e-11!41;UBERON:0001049!7.42e-11!57;UBERON:0005068!7.42e-11!57;UBERON:0006241!7.42e-11!57;UBERON:0007135!7.42e-11!57;UBERON:0002619!1.02e-10!22;UBERON:0003080!1.37e-10!42;UBERON:0002791!1.58e-10!33;UBERON:0000073!2.37e-10!94;UBERON:0001016!2.37e-10!94;UBERON:0000956!2.52e-10!25;UBERON:0000203!2.52e-10!25;UBERON:0001869!6.97e-10!32;UBERON:0000955!2.38e-09!69;UBERON:0006238!2.38e-09!69;UBERON:0002616!2.94e-09!59;UBERON:0002020!8.14e-09!34;UBERON:0003528!8.14e-09!34;UBERON:0001950!8.89e-09!20;UBERON:0002346!3.60e-08!90;UBERON:0000473!1.99e-07!8;UBERON:0003056!4.82e-07!61;UBERON:0003135!6.13e-07!11 | |||
|ontology_enrichment_uberon_v019=UBERON:0002021;1.75e-15;5!UBERON:0000473;3.94e-10;8!UBERON:0003135;1.31e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002021,2.17e-15,5;UBERON:0000473,4.03e-10,8;UBERON:0003135,1.33e-07,11 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204000691244253,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.42311289670768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.402829317109147,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0.117434498643765,0,0,0.204154171254893,0,0.103325781175765,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0,0,0,0,0.103052529238439,0,0,0,0,0,0,0.161646056818812,0,0,0,0,0,0,0,0,0,0,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414656231081544,1.72943944100354,0.75745460055828,0,0.381988425558278,1.17217447210047,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01637849688985,1.30139853857622,0,0.167516265334349,0,0,0,0,0,0.500170521059677,0,0,0,0,0,0.300946099727719,0,0,0,0,0.0868836144680828,0,0,0,0,0,0.303127571446259,0,0,0.248107807818777,0,0.280660094433074,0,0,0.160853921143607,0,0.154209693802656,0,0.0821271560138091,0.519254429183621,0,0,0,0.0920809889358963,0,0,0.393373244878272,0,0.15403067420883,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308097234229289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.372158369359667,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0.202910376962704,0,0,0,0,0,0.354761064070598,0,0.329294892959902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159426272728822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0.111308705022906,0,0,0.19924798825107,0,0,0.306806047506464,0,0,0,0,0,0.295930216910801,0,0,0,0.927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.384751292518985,0,0,0,0,0,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0.619202951523374,0,0,0.123563938946503,0,0.337005664903385,0,0,0,0,0,0,0,0.91821828489147,0.063186579628488,0.450970258243478,0,0,0,0,0,0,0,0,0,0,0.698906672968121,0,0,0,0,0.193978032976839,0,0,0,0.19871461170299,0.886351143382302,0,0,0.640358984218058,0,0.144090417154106,0,0.343189995723929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.429226048136571,0.223171457441873,0,0,1.16495949527454,0,0,0,0,0,0.795229689809303,0.136203406111576,0,0,0.415440338029185,0,0,0.303747783290123,0,0.315222829196793,0.157363764404994,0.105600336519406,0,0,0,0,0,0,0,0,0,0,0,0,0,2.65013777824443,0,0,0,0,0.213574825135389,0.157204305099666,0.414239055347196,0,0,0,0,0,0.2506898940227,0.612691153526923,0,0,0,0.366078794705889,0.250381861413,0,0,0.124192805882767,0,0,0.606596470166591,0.285465333544967,0,0,0.144921028610825,0,0.233713309847224,0,0,0,0,0,0.151230923763239,0,0.147855149989634,0.159296767163702,0.449803112163605,0,0,0,0,0,0,0,0.363697318405119,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0.106691729694141,0,0,0,0,0,0,0,0,0,0,0.212574920101683,0.867550349813015,0,0,0,0,0.352675943690684,0.3062454773532,0.513833800771676,0,0,5.12790910601888,1.00828678488687,0.691572524642179,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0.607838261565552,0,0,0.317079050969534,0,0,0,0.351742488719241,0,0.535701835878287,0,0,0,0,0,0,0.271878931907327,0.328863867814245,0,0,0.313972371402056,0,0,0,0,0,0.0714765441766563,0.316027223465453,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0.098150233615243,0,0,0.410651227424988,0,0.485710993059139,0,0,0,0,0.329821550236287,0.301925687133347,0.308696632431779,0,0,0.245148321753905,0.471353094203252,0.196308467114945,0,0.8453114551668,0,0,0.0644578879735772,0,0,0,0,0,0,0.143339583151451,0,0.883889372481891,0.436350690340377,0,0,0,0,0,0,0,0.203977659483963,0,0.827054095813604,0.50141507858475,2.34913964476542,5.62724673327975,0,0.103432995861895,0.639701945702943,0,0,0.186224142887574,0.112131862580613,0.0636471582781649,0,0,0,0,0.0717222053926763,0,0,0,0,0,0,0.122241444182866,0,0,0.402547587182052,0 | |||
|short_description=p6@KHDRBS3 | |||
}} |
Revision as of 03:56, 14 September 2013
Short description: | p6@KHDRBS3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_KHDRBS3_5end |
Coexpression cluster: | NA |
Association with transcript: | 234bp_to_NM_006558, uc003yuv.2, uc003yuw.2_5end |
EntrezGene: | KHDRBS3 |
HGNC: | 18117 |
UniProt: | O75525 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 6.63e-10 | 8 |
light melanocyte | 2.79e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
occipital lobe | 2.17e-15 | 5 |
testis | 4.03e-10 | 8 |
male reproductive organ | 1.33e-07 | 11 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.