FFCP PHASE1:Mm9::chr4:116229726..116229746,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=381|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr4:116229726..116229746,+|id=chr4:116229726..116229746,+|ontology_enrichment_celltype=CL:0002031!6.24e-08!25;CL:0000542!2.39e-07!13;CL:0000051!2.39e-07!13;CL:0000988!3.64e-07!32;CL:0002032!3.64e-07!32;CL:0000037!3.64e-07!32;CL:0000566!3.64e-07!32;CL:0000837!3.64e-07!32;CL:0000838!5.27e-07!12|ontology_enrichment_celltype_v019_2=CL:0002031,1.90e-08,25;CL:0000988,7.24e-08,32;CL:0002032,7.24e-08,32;CL:0000037,7.24e-08,32;CL:0000837,7.24e-08,32;CL:0000542,1.03e-07,13;CL:0000051,1.03e-07,13;CL:0000838,2.37e-07,12|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004119!4.08e-09!130;UBERON:0000925!4.08e-09!130;UBERON:0006595!4.08e-09!130;UBERON:0001007!5.31e-09!128;UBERON:0001555!5.31e-09!128;UBERON:0007026!5.31e-09!128;UBERON:0004921!1.18e-08!126;UBERON:0004185!1.18e-08!126;UBERON:0003929!3.18e-08!55;UBERON:0005057!5.26e-08!51;UBERON:0002405!6.13e-07!70;UBERON:0005911!7.53e-07!69|ontology_enrichment_uberon_v019_2=UBERON:0004119,3.46e-10,118;UBERON:0000925,3.46e-10,118;UBERON:0006595,3.46e-10,118;UBERON:0001007,4.49e-10,116;UBERON:0001555,4.49e-10,116;UBERON:0007026,4.49e-10,116;UBERON:0004921,1.07e-09,114;UBERON:0003929,5.23e-09,55;UBERON:0005911,2.66e-07,69|phase1_expression=0.160148847104794,2.44282785347553,0.909998478779072,3.32710632437513,2.00358291978539,1.51091344720701,2.10251376535973,3.87369970324729,2.25261955442667,3.5109678948299,3.76679530096111,4.86610169871552,2.39681021903688,3.93391810885488,5.66286595086627,2.83465374345756,4.19737126876888,1.10411757875383,1.91960207048034,1.27316895539409,5.44277056966847,2.28369187762036,2.08959831311148,2.71987118748791,1.37645568640302,0,0.86152399231815,1.72376986148711,2.47030445293286,1.00812051903972,1.55211357458713,12.065582795733,3.07532393792285,15.8481681015439,2.02196133825892,2.65975432573588,4.28755648150975,1.25559489221072,0.7813353445238,3.66466620781659,0,1.36609096991689,2.42755176515577,1.00717454380462,0.405507724878058,0,0,0.218025156380447,0.439372365468944,1.1665793944457,0.279972843250725,0,5.70460860596304,2.90144856804538,4.36921938885203,1.02903774414379,0.573066879877513,0,1.41621522601718,1.05798195854407,0.633831403506179,1.0165335962074,0,0.899899717281399,0,0.7104801149461,0.599200221036809,0.384218305321555,0.725827286159344,1.35005938331691,1.47227472945967,0.285650984403804,0.220868540951614,1.5923803897944,1.53352753629178,0,0,0.383062014255563,0,1.05509030184155,0.548925861614458,0,0.558365998002762,1.12552522006336,0.30559649555362,0.883885756421003,0.854230084794618,0.745597783301202,0.530083353332288,0.906858721281426,1.15945795480671,2.58127163094416,0,2.15881276655127,3.24888208723835,5.37632264516803,1.54488862144927,0.681721290312231,0.259786004602869,0.70667914902068,0.563373679106722,0,0,0,1.94841936910093,1.77351905832569,0.505524445014783,2.96878087269556,2.58937883647172,0.742210695324124,0.693941307064543,0.608930956624282,0.922461989024234,0.753613202763113,0.823120949949934,0.376999773989026,2.71914464507811,3.61498392299779,3.5384422077995,1.45590164952668,0.883366073841574,1.93950101254089,3.72783522436244,1.17112318804619,0.41889341362691,1.53274233125155,2.15667224110656,2.99951365496704,1.27070227073065,0.898743836428936,0.457500602818626,1.7591609295801,0.347648640384553,0,0,1.1356888414743,0.509196819251581,1.61729061793121,1.76905930903572,1.68353484709179,1.43132487258974,1.83921683546778,1.26043490863744,1.65775299619287,1.7009124787832,1.15302348256365,1.03071897015702,0.258703370739016,1.94011193639558,1.13463648100692,1.75951124163949,0.657587197282725,1.66828349535359,1.0447564995665,1.23469281844766,0.995171334092466,1.40442637462647,0,0.568326998791185,0.621377317606506,1.17263029990548,0.540186184383045,1.18372367792605,0.983821158737019,0.462801338662135,1.62773761325285,0.536546802799238,0.350296027101508,0.822799249567402,0.656669856316381,0.324275238183423,0.438599962275997,1.3173006917463,0.402619256281115,1.47202963994889,1.13195073617213,2.97376904685418,2.64450566663544,2.55945900642281,0.696710015581316,2.44848176511977,1.81515172161008,0.889512175379481,2.28270751335071,1.42358718463353,0.823494773620054,1.75934646160189,1.1937388322469,0.974820435595601,1.79763881730844,1.08069024937347,3.38540164532424,1.51734320762465,0.913988100877831,0,1.83286195060783,0.969762435838129,0.701358198903186,1.01178459398812,1.62371162777562,1.72698600625512,0.987177311374404,5.03969466048153,3.00321190288969,3.73462090715086,2.02375901146368,1.82574109249653,0.72353147925725,3.05551022137704,1.43848068725405,1.45921704097532,2.47105271869273,2.87536413054709,2.23284568601102,1.24815069245824,2.02063102357689,1.25578189465339,0.482443521363367,1.84753190166605,0.947457058852424,2.11854469374634,1.35796068620151,0.704070744865506,2.01007508930179,1.19021820443007,0.195133647857799,0.630540576424764,0.664394068946325,1.2756381492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| ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=381 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr4:116229726..116229746,+ | |||
|id=chr4:116229726..116229746,+ | |||
|ontology_enrichment_celltype=CL:0002031!6.24e-08!25;CL:0000542!2.39e-07!13;CL:0000051!2.39e-07!13;CL:0000988!3.64e-07!32;CL:0002032!3.64e-07!32;CL:0000037!3.64e-07!32;CL:0000566!3.64e-07!32;CL:0000837!3.64e-07!32;CL:0000838!5.27e-07!12 | |||
|ontology_enrichment_celltype_v019_2=CL:0002031,1.90e-08,25;CL:0000988,7.24e-08,32;CL:0002032,7.24e-08,32;CL:0000037,7.24e-08,32;CL:0000837,7.24e-08,32;CL:0000542,1.03e-07,13;CL:0000051,1.03e-07,13;CL:0000838,2.37e-07,12 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!4.08e-09!130;UBERON:0000925!4.08e-09!130;UBERON:0006595!4.08e-09!130;UBERON:0001007!5.31e-09!128;UBERON:0001555!5.31e-09!128;UBERON:0007026!5.31e-09!128;UBERON:0004921!1.18e-08!126;UBERON:0004185!1.18e-08!126;UBERON:0003929!3.18e-08!55;UBERON:0005057!5.26e-08!51;UBERON:0002405!6.13e-07!70;UBERON:0005911!7.53e-07!69 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,3.46e-10,118;UBERON:0000925,3.46e-10,118;UBERON:0006595,3.46e-10,118;UBERON:0001007,4.49e-10,116;UBERON:0001555,4.49e-10,116;UBERON:0007026,4.49e-10,116;UBERON:0004921,1.07e-09,114;UBERON:0003929,5.23e-09,55;UBERON:0005911,2.66e-07,69 | |||
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| |||
|short_description=p@chr4:116229726..116229746,+ | |||
}} |
Revision as of 03:31, 14 September 2013
Short description: | p@chr4:116229726..116229746, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr4:116229726..116229746, + |
Coexpression cluster: | MCL_coexpression_mm9:381 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic lineage restricted progenitor cell | 1.90e-08 | 25 |
hematopoietic cell | 7.24e-08 | 32 |
hematopoietic oligopotent progenitor cell | 7.24e-08 | 32 |
hematopoietic stem cell | 7.24e-08 | 32 |
hematopoietic multipotent progenitor cell | 7.24e-08 | 32 |
lymphocyte | 1.03e-07 | 13 |
common lymphoid progenitor | 1.03e-07 | 13 |
lymphoid lineage restricted progenitor cell | 2.37e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 3.46e-10 | 118 |
endoderm | 3.46e-10 | 118 |
presumptive endoderm | 3.46e-10 | 118 |
digestive system | 4.49e-10 | 116 |
digestive tract | 4.49e-10 | 116 |
primitive gut | 4.49e-10 | 116 |
subdivision of digestive tract | 1.07e-09 | 114 |
gut epithelium | 5.23e-09 | 55 |
endo-epithelium | 2.66e-07 | 69 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.