FFCP PHASE1:Hg19::chr8:124665994..124666002,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C618|description=CAGE_peak_at_chr8:124665994..124666002,-|id=chr8:124665994..124666002,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0010227;3.74e-18;1!UBERON:0004140;3.74e-18;1!UBERON:0010226;1.03e-17;1!UBERON:0008814;1.57e-09;2!UBERON:0010056;1.57e-09;2|ontology_enrichment_disease=DOID:114!7.07e-09!2|ontology_enrichment_disease_v019=DOID:114;1.38e-33;2!DOID:178;1.03e-17;1!DOID:326;1.03e-17;1!DOID:3978;1.03e-17;1!DOID:3394;1.03e-17;1!DOID:5844;1.03e-17;1!DOID:1287;2.38e-17;4|ontology_enrichment_disease_v019_2=DOID:114,9.92e-34,2;DOID:178,1.03e-17,1;DOID:326,1.03e-17,1;DOID:3978,1.03e-17,1;DOID:3394,1.03e-17,1;DOID:5844,1.03e-17,1;DOID:1287,2.02e-17,4|ontology_enrichment_uberon=UBERON:0007023!1.21e-17!115;UBERON:0007100!3.31e-12!27;UBERON:0000341!8.87e-09!2;UBERON:0003103!1.18e-08!69;UBERON:0000481!3.93e-07!347;UBERON:0000078!6.46e-07!18;UBERON:0000948!8.96e-07!24;UBERON:0005498!8.96e-07!24;UBERON:0004140!8.96e-07!24;UBERON:0009881!8.96e-07!24;UBERON:0004141!8.96e-07!24;UBERON:0003084!8.96e-07!24;UBERON:0007005!8.96e-07!24;UBERON:0004139!8.96e-07!24;UBERON:0004291!8.96e-07!24|ontology_enrichment_uberon_v019=UBERON:0007100;6.49e-32;25!UBERON:0004151;4.60e-23;3!UBERON:0001723;8.98e-23;3!UBERON:0001033;8.98e-23;3!UBERON:0002079;3.74e-18;1!UBERON:0002084;1.03e-17;1!UBERON:0002146;1.03e-17;1!UBERON:0002082;1.03e-17;1!UBERON:0005623;1.03e-17;1!UBERON:0000948;2.10e-12;22!UBERON:0002081;9.46e-10;2!UBERON:0000341;1.57e-09;2!UBERON:0003103;7.33e-07;61!UBERON:0003978;9.11e-07;3!UBERON:0000946;9.11e-07;3|ontology_enrichment_uberon_v019_2=UBERON:0007100,1.77e-29,27;UBERON:0004151,6.44e-23,3;UBERON:0001723,7.20e-23,3;UBERON:0001033,7.20e-23,3;UBERON:0010056,7.20e-23,3;UBERON:0003103,6.08e-19,68;UBERON:0002079,4.44e-18,1;UBERON:0002084,1.44e-17,1;UBERON:0002082,1.44e-17,1;UBERON:0010226,1.44e-17,1;UBERON:0002146,1.70e-17,1;UBERON:0005623,1.70e-17,1;UBERON:0000948,2.45e-11,24;UBERON:0005498,2.45e-11,24;UBERON:0004140,2.45e-11,24;UBERON:0009881,2.45e-11,24;UBERON:0004141,2.45e-11,24;UBERON:0003084,2.45e-11,24;UBERON:0007005,2.45e-11,24;UBERON:0004139,2.45e-11,24;UBERON:0004291,2.45e-11,24;UBERON:0007023,4.95e-11,114;UBERON:0002081,1.03e-09,2;UBERON:0010227,1.03e-09,2;UBERON:0000341,1.44e-09,2;UBERON:0001042,1.57e-07,10;UBERON:0009145,1.57e-07,10;UBERON:0006562,6.35e-07,11;UBERON:0001009,8.16e-07,112|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0.37129905888014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103325781175765,0,0,0,0,0,0,0,0.438977620880838,0,0.150238058906597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285955987316295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082509499920588,0,0,0,0,0,0,0,0.107420244868274,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202910376962704,0,0,0,0,0,0.354761064070598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.586032717087576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0.0874599999961957,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10893846351899,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0.426905989478705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,1.14580212005842,0,1.39775300349294,1.71690419254628,2.23171457441873,3.8294579317434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,3.57347663186684,1.32418394073086,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147855149989634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205116364240755,0,0,0,0,0,0,0,0,0,0,0.795664888465099,0,0,0,0,0,0,0,0,0,0,0,0,0.992422356778588,0,0,0,0,0,0,0,0,0,0,0.131545547125698,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0.51215543128185,0,0,0,0,0,0,0,0,0,0,0,0,3.69586104682489,5.799072156691,0.485710993059139,0,0,0,0,0,0,0,0,0,0.245148321753905,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0.271965960763659,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.70587185520785,0.952257725854961,0,0,0,0.12729431655633,0,1.74173398317569,1.36893320434112,0.26940821205835,0,0,0,0,0,0,0,0.122241444182866,0,0,0,0|short_description=p@chr8:124665994..124666002,-}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C618 | |||
|description=CAGE_peak_at_chr8:124665994..124666002,- | |||
|id=chr8:124665994..124666002,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0010227;3.74e-18;1!UBERON:0004140;3.74e-18;1!UBERON:0010226;1.03e-17;1!UBERON:0008814;1.57e-09;2!UBERON:0010056;1.57e-09;2 | |||
|ontology_enrichment_disease=DOID:114!7.07e-09!2 | |||
|ontology_enrichment_disease_v019=DOID:114;1.38e-33;2!DOID:178;1.03e-17;1!DOID:326;1.03e-17;1!DOID:3978;1.03e-17;1!DOID:3394;1.03e-17;1!DOID:5844;1.03e-17;1!DOID:1287;2.38e-17;4 | |||
|ontology_enrichment_disease_v019_2=DOID:114,9.92e-34,2;DOID:178,1.03e-17,1;DOID:326,1.03e-17,1;DOID:3978,1.03e-17,1;DOID:3394,1.03e-17,1;DOID:5844,1.03e-17,1;DOID:1287,2.02e-17,4 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.21e-17!115;UBERON:0007100!3.31e-12!27;UBERON:0000341!8.87e-09!2;UBERON:0003103!1.18e-08!69;UBERON:0000481!3.93e-07!347;UBERON:0000078!6.46e-07!18;UBERON:0000948!8.96e-07!24;UBERON:0005498!8.96e-07!24;UBERON:0004140!8.96e-07!24;UBERON:0009881!8.96e-07!24;UBERON:0004141!8.96e-07!24;UBERON:0003084!8.96e-07!24;UBERON:0007005!8.96e-07!24;UBERON:0004139!8.96e-07!24;UBERON:0004291!8.96e-07!24 | |||
|ontology_enrichment_uberon_v019=UBERON:0007100;6.49e-32;25!UBERON:0004151;4.60e-23;3!UBERON:0001723;8.98e-23;3!UBERON:0001033;8.98e-23;3!UBERON:0002079;3.74e-18;1!UBERON:0002084;1.03e-17;1!UBERON:0002146;1.03e-17;1!UBERON:0002082;1.03e-17;1!UBERON:0005623;1.03e-17;1!UBERON:0000948;2.10e-12;22!UBERON:0002081;9.46e-10;2!UBERON:0000341;1.57e-09;2!UBERON:0003103;7.33e-07;61!UBERON:0003978;9.11e-07;3!UBERON:0000946;9.11e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007100,1.77e-29,27;UBERON:0004151,6.44e-23,3;UBERON:0001723,7.20e-23,3;UBERON:0001033,7.20e-23,3;UBERON:0010056,7.20e-23,3;UBERON:0003103,6.08e-19,68;UBERON:0002079,4.44e-18,1;UBERON:0002084,1.44e-17,1;UBERON:0002082,1.44e-17,1;UBERON:0010226,1.44e-17,1;UBERON:0002146,1.70e-17,1;UBERON:0005623,1.70e-17,1;UBERON:0000948,2.45e-11,24;UBERON:0005498,2.45e-11,24;UBERON:0004140,2.45e-11,24;UBERON:0009881,2.45e-11,24;UBERON:0004141,2.45e-11,24;UBERON:0003084,2.45e-11,24;UBERON:0007005,2.45e-11,24;UBERON:0004139,2.45e-11,24;UBERON:0004291,2.45e-11,24;UBERON:0007023,4.95e-11,114;UBERON:0002081,1.03e-09,2;UBERON:0010227,1.03e-09,2;UBERON:0000341,1.44e-09,2;UBERON:0001042,1.57e-07,10;UBERON:0009145,1.57e-07,10;UBERON:0006562,6.35e-07,11;UBERON:0001009,8.16e-07,112 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0.37129905888014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103325781175765,0,0,0,0,0,0,0,0.438977620880838,0,0.150238058906597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285955987316295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082509499920588,0,0,0,0,0,0,0,0.107420244868274,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202910376962704,0,0,0,0,0,0.354761064070598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.586032717087576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0.0874599999961957,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10893846351899,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0.426905989478705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,1.14580212005842,0,1.39775300349294,1.71690419254628,2.23171457441873,3.8294579317434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,3.57347663186684,1.32418394073086,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147855149989634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205116364240755,0,0,0,0,0,0,0,0,0,0,0.795664888465099,0,0,0,0,0,0,0,0,0,0,0,0,0.992422356778588,0,0,0,0,0,0,0,0,0,0,0.131545547125698,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0.51215543128185,0,0,0,0,0,0,0,0,0,0,0,0,3.69586104682489,5.799072156691,0.485710993059139,0,0,0,0,0,0,0,0,0,0.245148321753905,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0.271965960763659,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.70587185520785,0.952257725854961,0,0,0,0.12729431655633,0,1.74173398317569,1.36893320434112,0.26940821205835,0,0,0,0,0,0,0,0.122241444182866,0,0,0,0 | |||
|short_description=p@chr8:124665994..124666002,- | |||
}} |
Revision as of 03:25, 14 September 2013
Short description: | p@chr8:124665994..124666002, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr8:124665994..124666002, - |
Coexpression cluster: | C618_skeletal_heart_left_diaphragm_throat_skin_maxillary |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
primary circulatory organ | 1.77e-29 | 27 |
cardiac chamber | 6.44e-23 | 3 |
tongue | 7.20e-23 | 3 |
gustatory system | 7.20e-23 | 3 |
future tongue | 7.20e-23 | 3 |
compound organ | 6.08e-19 | 68 |
left cardiac atrium | 4.44e-18 | 1 |
heart left ventricle | 1.44e-17 | 1 |
cardiac ventricle | 1.44e-17 | 1 |
future cardiac ventricle | 1.44e-17 | 1 |
pulmonary valve | 1.70e-17 | 1 |
semi-lunar valve | 1.70e-17 | 1 |
heart | 2.45e-11 | 24 |
primitive heart tube | 2.45e-11 | 24 |
primary heart field | 2.45e-11 | 24 |
anterior lateral plate mesoderm | 2.45e-11 | 24 |
heart tube | 2.45e-11 | 24 |
heart primordium | 2.45e-11 | 24 |
cardiac mesoderm | 2.45e-11 | 24 |
cardiogenic plate | 2.45e-11 | 24 |
heart rudiment | 2.45e-11 | 24 |
adult organism | 4.95e-11 | 114 |
cardiac atrium | 1.03e-09 | 2 |
future cardiac atrium | 1.03e-09 | 2 |
throat | 1.44e-09 | 2 |
chordate pharynx | 1.57e-07 | 10 |
pharyngeal region of foregut | 1.57e-07 | 10 |
pharynx | 6.35e-07 | 11 |
circulatory system | 8.16e-07 | 112 |
Ontology term | p-value | n |
---|---|---|
heart disease | 9.92e-34 | 2 |
vascular disease | 1.03e-17 | 1 |
ischemia | 1.03e-17 | 1 |
extrinsic cardiomyopathy | 1.03e-17 | 1 |
myocardial ischemia | 1.03e-17 | 1 |
myocardial infarction | 1.03e-17 | 1 |
cardiovascular system disease | 2.02e-17 | 4 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.