FFCP PHASE1:Hg19::chr8:119634131..119634136,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=401474|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=31750|TSSclassifier=S|UniProt=F8VYB8|association_with_transcript=0bp_to_ENST00000445741_5end|description=CAGE_peak_6_at_SAMD12_5end|id=chr8:119634131..119634136,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0006215;9.43e-11;3|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:3111;2.05e-29;1!DOID:3603;2.05e-29;1|ontology_enrichment_disease_v019_2=DOID:3111,1.33e-29,1;DOID:3603,1.33e-29,1|ontology_enrichment_uberon=UBERON:0001049!9.67e-17!57;UBERON:0005068!9.67e-17!57;UBERON:0006241!9.67e-17!57;UBERON:0007135!9.67e-17!57;UBERON:0007023!1.14e-16!115;UBERON:0002616!2.42e-13!59;UBERON:0002780!6.89e-12!41;UBERON:0001890!6.89e-12!41;UBERON:0006240!6.89e-12!41;UBERON:0001017!6.97e-12!82;UBERON:0005743!1.02e-11!86;UBERON:0000955!1.07e-11!69;UBERON:0006238!1.07e-11!69;UBERON:0003080!1.86e-11!42;UBERON:0000073!4.55e-11!94;UBERON:0001016!4.55e-11!94;UBERON:0003075!4.57e-11!86;UBERON:0007284!4.57e-11!86;UBERON:0002619!1.87e-10!22;UBERON:0002346!3.81e-10!90;UBERON:0001950!4.75e-10!20;UBERON:0002020!5.61e-10!34;UBERON:0003528!5.61e-10!34;UBERON:0001893!8.81e-10!34;UBERON:0001869!1.30e-09!32;UBERON:0002791!7.70e-09!33;UBERON:0000956!8.85e-09!25;UBERON:0000203!8.85e-09!25;UBERON:0003056!1.91e-07!61;UBERON:0003076!9.99e-07!15;UBERON:0003057!9.99e-07!15|ontology_enrichment_uberon_v019=UBERON:0002771;1.91e-15;2!UBERON:0001950;7.89e-13;20!UBERON:0002619;8.88e-12;22!UBERON:0001870;9.43e-11;3!UBERON:0000956;1.68e-10;25!UBERON:0000203;1.68e-10;25!UBERON:0003528;2.72e-08;34!UBERON:0002020;2.72e-08;34!UBERON:0002791;4.03e-07;32!UBERON:0001893;4.03e-07;34!UBERON:0001872;5.86e-07;5|ontology_enrichment_uberon_v019_2=UBERON:0002771,2.05e-15,2;UBERON:0001950,8.39e-13,20;UBERON:0002619,9.39e-12,22;UBERON:0001870,8.99e-11,3;UBERON:0000956,1.76e-10,25;UBERON:0000203,1.76e-10,25;UBERON:0000073,7.90e-09,53;UBERON:0002616,7.90e-09,53;UBERON:0002791,2.12e-08,32;UBERON:0001869,2.12e-08,32;UBERON:0001049,2.18e-08,56;UBERON:0005068,2.18e-08,56;UBERON:0006241,2.18e-08,56;UBERON:0007135,2.18e-08,56;UBERON:0003528,5.87e-08,34;UBERON:0002020,5.87e-08,34;UBERON:0001893,5.87e-08,34;UBERON:0001872,6.39e-07,5;UBERON:0000955,6.64e-07,68;UBERON:0006238,6.64e-07,68;UBERON:0002780,9.81e-07,41;UBERON:0001890,9.81e-07,41;UBERON:0003080,9.81e-07,41;UBERON:0006240,9.81e-07,41|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.458480434487708,0.246301768349837,0.393553906568396,0,0,0,0,0,0,0.154934401160603,0.568676929949686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289803085735052,0.14828656316206,0,0,0,0,0.34362744548263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258416759169329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241011029883482,0.110293972732394,0.217879444092406,0,0,0,0,0,0,0,0,0,0,0,0.882926198829301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0.206768026122887,0.215714200818617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920809889358963,0.114814448164607,0,0.262248829918848,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192190067365106,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272999822815972,0.282810863907425,0,0,0,0.438450885253763,0,0,0,0,0.281695602532241,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37428108081644,0,0,0,0,0,0,0,0,0.703347082052564,0,0,0,0,0,0,0.20453736500431,0,0,0.179736702294654,0.537063524026827,0,0,2.3948309234694,0,0,0.185536196323703,0,0,0,0,0.1137934482855,0.508507300585533,0,0,0.291604613383254,0,0,0.361789315876224,0,1.10579259931225,0.295547618953547,0.438770794307945,0,0.41827123283581,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.158936578980379,0,0.489698424477443,0,0,0,0.0884575645033392,0,0,0,0,0.067401132980677,0,0.234264445725339,0,0,0,0,0,0,0.063186579628488,0.150323419414493,0,0,0,0,0,0.853828638089378,0,0,0.195984794828755,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,1.26621591911757,0.391102765469606,0.0801588202515337,0,0,0.288180834308212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.408610218334727,0,0,0,0,0,0.485996453264197,0.335434687599266,0.315222829196793,0.0524545881349981,0,0,0.383830394638891,0,0,0,0,0,0,0,0,0,0.113312091520126,0,0,0.387848869084652,0.39669780522807,0,0.704815022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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=401474 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=31750 | |||
|TSSclassifier=S | |||
|UniProt=F8VYB8 | |||
|association_with_transcript=0bp_to_ENST00000445741_5end | |||
|description=CAGE_peak_6_at_SAMD12_5end | |||
|id=chr8:119634131..119634136,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;9.43e-11;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3111;2.05e-29;1!DOID:3603;2.05e-29;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3111,1.33e-29,1;DOID:3603,1.33e-29,1 | |||
|ontology_enrichment_uberon=UBERON:0001049!9.67e-17!57;UBERON:0005068!9.67e-17!57;UBERON:0006241!9.67e-17!57;UBERON:0007135!9.67e-17!57;UBERON:0007023!1.14e-16!115;UBERON:0002616!2.42e-13!59;UBERON:0002780!6.89e-12!41;UBERON:0001890!6.89e-12!41;UBERON:0006240!6.89e-12!41;UBERON:0001017!6.97e-12!82;UBERON:0005743!1.02e-11!86;UBERON:0000955!1.07e-11!69;UBERON:0006238!1.07e-11!69;UBERON:0003080!1.86e-11!42;UBERON:0000073!4.55e-11!94;UBERON:0001016!4.55e-11!94;UBERON:0003075!4.57e-11!86;UBERON:0007284!4.57e-11!86;UBERON:0002619!1.87e-10!22;UBERON:0002346!3.81e-10!90;UBERON:0001950!4.75e-10!20;UBERON:0002020!5.61e-10!34;UBERON:0003528!5.61e-10!34;UBERON:0001893!8.81e-10!34;UBERON:0001869!1.30e-09!32;UBERON:0002791!7.70e-09!33;UBERON:0000956!8.85e-09!25;UBERON:0000203!8.85e-09!25;UBERON:0003056!1.91e-07!61;UBERON:0003076!9.99e-07!15;UBERON:0003057!9.99e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0002771;1.91e-15;2!UBERON:0001950;7.89e-13;20!UBERON:0002619;8.88e-12;22!UBERON:0001870;9.43e-11;3!UBERON:0000956;1.68e-10;25!UBERON:0000203;1.68e-10;25!UBERON:0003528;2.72e-08;34!UBERON:0002020;2.72e-08;34!UBERON:0002791;4.03e-07;32!UBERON:0001893;4.03e-07;34!UBERON:0001872;5.86e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002771,2.05e-15,2;UBERON:0001950,8.39e-13,20;UBERON:0002619,9.39e-12,22;UBERON:0001870,8.99e-11,3;UBERON:0000956,1.76e-10,25;UBERON:0000203,1.76e-10,25;UBERON:0000073,7.90e-09,53;UBERON:0002616,7.90e-09,53;UBERON:0002791,2.12e-08,32;UBERON:0001869,2.12e-08,32;UBERON:0001049,2.18e-08,56;UBERON:0005068,2.18e-08,56;UBERON:0006241,2.18e-08,56;UBERON:0007135,2.18e-08,56;UBERON:0003528,5.87e-08,34;UBERON:0002020,5.87e-08,34;UBERON:0001893,5.87e-08,34;UBERON:0001872,6.39e-07,5;UBERON:0000955,6.64e-07,68;UBERON:0006238,6.64e-07,68;UBERON:0002780,9.81e-07,41;UBERON:0001890,9.81e-07,41;UBERON:0003080,9.81e-07,41;UBERON:0006240,9.81e-07,41 | |||
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|short_description=p6@SAMD12 | |||
}} |
Revision as of 03:18, 14 September 2013
Short description: | p6@SAMD12 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_SAMD12_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000445741_5end |
EntrezGene: | SAMD12 |
HGNC: | 31750 |
UniProt: | F8VYB8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
middle temporal gyrus | 2.05e-15 | 2 |
neocortex | 8.39e-13 | 20 |
regional part of cerebral cortex | 9.39e-12 | 22 |
frontal cortex | 8.99e-11 | 3 |
cerebral cortex | 1.76e-10 | 25 |
pallium | 1.76e-10 | 25 |
regional part of nervous system | 7.90e-09 | 53 |
regional part of brain | 7.90e-09 | 53 |
regional part of telencephalon | 2.12e-08 | 32 |
cerebral hemisphere | 2.12e-08 | 32 |
neural tube | 2.18e-08 | 56 |
neural rod | 2.18e-08 | 56 |
future spinal cord | 2.18e-08 | 56 |
neural keel | 2.18e-08 | 56 |
brain grey matter | 5.87e-08 | 34 |
gray matter | 5.87e-08 | 34 |
telencephalon | 5.87e-08 | 34 |
parietal lobe | 6.39e-07 | 5 |
brain | 6.64e-07 | 68 |
future brain | 6.64e-07 | 68 |
regional part of forebrain | 9.81e-07 | 41 |
forebrain | 9.81e-07 | 41 |
anterior neural tube | 9.81e-07 | 41 |
future forebrain | 9.81e-07 | 41 |
Ontology term | p-value | n |
---|---|---|
cystadenocarcinoma | 1.33e-29 | 1 |
mucinous cystadenocarcinoma | 1.33e-29 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.