FFCP PHASE1:Hg19::chr8:119202179..119202185,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=401474|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=31750|TSSclassifier=N|UniProt=|association_with_transcript=-62bp_to_EF212289_5end|description=CAGE_peak_2_at_SAMD12_5end|id=chr8:119202179..119202185,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0006601;9.31e-08;82|ontology_enrichment_disease=DOID:305!2.46e-11!106;DOID:0050687!6.23e-10!143;DOID:14566!6.95e-07!239|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=DOID:305,3.47e-08,106;DOID:0050687,6.67e-07,143|ontology_enrichment_uberon=UBERON:0001049!4.95e-24!57;UBERON:0005068!4.95e-24!57;UBERON:0006241!4.95e-24!57;UBERON:0007135!4.95e-24!57;UBERON:0005743!5.93e-23!86;UBERON:0001017!6.62e-23!82;UBERON:0000073!1.36e-22!94;UBERON:0001016!1.36e-22!94;UBERON:0007023!5.93e-22!115;UBERON:0000955!1.61e-21!69;UBERON:0006238!1.61e-21!69;UBERON:0003080!1.93e-20!42;UBERON:0002780!2.80e-20!41;UBERON:0001890!2.80e-20!41;UBERON:0006240!2.80e-20!41;UBERON:0002616!3.20e-20!59;UBERON:0003075!1.92e-18!86;UBERON:0007284!1.92e-18!86;UBERON:0002346!9.82e-18!90;UBERON:0002020!4.01e-17!34;UBERON:0003528!4.01e-17!34;UBERON:0001893!8.45e-17!34;UBERON:0002791!3.55e-16!33;UBERON:0001869!6.82e-16!32;UBERON:0003056!1.81e-15!61;UBERON:0002619!1.42e-13!22;UBERON:0000033!2.11e-13!123;UBERON:0000153!6.83e-13!129;UBERON:0007811!6.83e-13!129;UBERON:0001950!2.83e-12!20;UBERON:0000956!3.86e-12!25;UBERON:0000203!3.86e-12!25;UBERON:0004121!9.66e-11!169;UBERON:0000924!1.49e-10!173;UBERON:0006601!1.49e-10!173;UBERON:0000064!2.14e-08!219;UBERON:0005409!7.67e-08!35;UBERON:0000481!2.39e-07!347;UBERON:0002420!7.98e-07!9;UBERON:0007245!7.98e-07!9;UBERON:0010009!7.98e-07!9;UBERON:0010011!7.98e-07!9;UBERON:0000454!7.98e-07!9|ontology_enrichment_uberon_v019=UBERON:0003528;2.84e-23;34!UBERON:0002020;2.84e-23;34!UBERON:0002791;6.24e-23;32!UBERON:0001869;7.26e-23;32!UBERON:0002619;1.51e-22;22!UBERON:0002780;9.64e-22;41!UBERON:0001890;9.64e-22;41!UBERON:0001893;3.46e-21;34!UBERON:0001950;3.16e-20;20!UBERON:0000956;4.59e-19;25!UBERON:0000203;4.59e-19;25!UBERON:0000073;2.31e-18;53!UBERON:0002616;2.31e-18;53!UBERON:0001017;3.63e-13;75!UBERON:0000955;5.62e-12;68!UBERON:0001016;2.05e-11;83!UBERON:0002420;1.18e-10;9!UBERON:0007245;1.18e-10;9!UBERON:0010009;1.18e-10;9!UBERON:0010011;1.18e-10;9!UBERON:0000454;1.18e-10;9!UBERON:0000125;3.64e-10;9!UBERON:0002308;3.64e-10;9!UBERON:0000200;7.08e-09;6!UBERON:0009663;5.11e-08;7!UBERON:0007023;6.20e-08;114!UBERON:0000349;2.80e-07;5!UBERON:0001871;4.93e-07;6!UBERON:0002021;5.62e-07;5|ontology_enrichment_uberon_v019_2=UBERON:0001049,4.58e-38,56;UBERON:0005068,4.58e-38,56;UBERON:0006241,4.58e-38,56;UBERON:0007135,4.58e-38,56;UBERON:0000073,3.75e-35,53;UBERON:0002616,3.75e-35,53;UBERON:0002780,5.07e-31,41;UBERON:0001890,5.07e-31,41;UBERON:0003080,5.07e-31,41;UBERON:0006240,5.07e-31,41;UBERON:0001017,3.54e-30,81;UBERON:0000955,2.06e-29,68;UBERON:0006238,2.06e-29,68;UBERON:0001016,6.17e-29,89;UBERON:0003528,4.48e-28,34;UBERON:0002020,4.48e-28,34;UBERON:0003075,9.56e-28,82;UBERON:0007284,9.56e-28,82;UBERON:0002346,9.86e-27,86;UBERON:0001893,5.35e-26,34;UBERON:0002791,5.85e-26,32;UBERON:0001869,7.29e-26,32;UBERON:0003056,1.02e-22,61;UBERON:0002619,1.30e-22,22;UBERON:0007023,2.39e-22,114;UBERON:0011216,1.29e-20,223;UBERON:0001950,2.90e-20,20;UBERON:0010371,3.50e-19,104;UBERON:0000956,4.04e-19,25;UBERON:0000203,4.04e-19,25;UBERON:0010314,1.47e-17,132;UBERON:0004121,1.68e-12,171;UBERON:0000924,1.68e-12,171;UBERON:0006601,1.68e-12,171;UBERON:0002420,4.31e-11,9;UBERON:0007245,4.31e-11,9;UBERON:0010009,4.31e-11,9;UBERON:0010011,4.31e-11,9;UBERON:0000454,4.31e-11,9;UBERON:0000125,1.42e-10,9;UBERON:0002308,1.42e-10,9;UBERON:0004111,2.67e-10,240;UBERON:0000025,2.31e-09,192;UBERON:0000200,7.78e-09,6;UBERON:0009663,1.81e-08,7;UBERON:0003076,2.53e-08,15;UBERON:0003057,2.53e-08,15;UBERON:0000349,1.77e-07,5;UBERON:0002021,4.41e-07,5;UBERON:0001871,6.17e-07,6;UBERON:0000483,7.55e-07,306|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.37129905888014,0.662794751455832,0,0.602694528023977,0,0,0,0,0,0.572471974262113,0,0.125542639594803,1.06978768047132,0.492603536699674,0.472264687882075,0,0.767658796194425,0,0,0,0,0.387336002901508,0.568676929949686,0.293600439334847,0,0,0,0,0,0.257575567634187,0,0,0,0.232429036905685,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212604299965044,0,0,0.150176892841506,0,0,0,0,0,0,0,0.426730222566507,0.400395987036012,0,0,0,2.84606484554724,1.76171156811282,0.764546456250458,0,0.560508562981536,0.263384084775077,0.786839080455332,1.17903228824749,0,0.167186495390678,0,0.473447805734733,0,0.111410456885174,0.589211814949674,0.443067789167242,0.270803863765016,0.384273959177026,0.130059347559878,1.31550323682941,0,0,0.296573126324121,0.267540828089713,1.04535523804977,0.113309342697566,0,0.34362744548263,0,0.318565414324097,0.651083453856419,0,0.150575119077773,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=401474 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=31750 | |||
|TSSclassifier=N | |||
|UniProt= | |||
|association_with_transcript=-62bp_to_EF212289_5end | |||
|description=CAGE_peak_2_at_SAMD12_5end | |||
|id=chr8:119202179..119202185,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;9.31e-08;82 | |||
|ontology_enrichment_disease=DOID:305!2.46e-11!106;DOID:0050687!6.23e-10!143;DOID:14566!6.95e-07!239 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,3.47e-08,106;DOID:0050687,6.67e-07,143 | |||
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|ontology_enrichment_uberon_v019_2=UBERON:0001049,4.58e-38,56;UBERON:0005068,4.58e-38,56;UBERON:0006241,4.58e-38,56;UBERON:0007135,4.58e-38,56;UBERON:0000073,3.75e-35,53;UBERON:0002616,3.75e-35,53;UBERON:0002780,5.07e-31,41;UBERON:0001890,5.07e-31,41;UBERON:0003080,5.07e-31,41;UBERON:0006240,5.07e-31,41;UBERON:0001017,3.54e-30,81;UBERON:0000955,2.06e-29,68;UBERON:0006238,2.06e-29,68;UBERON:0001016,6.17e-29,89;UBERON:0003528,4.48e-28,34;UBERON:0002020,4.48e-28,34;UBERON:0003075,9.56e-28,82;UBERON:0007284,9.56e-28,82;UBERON:0002346,9.86e-27,86;UBERON:0001893,5.35e-26,34;UBERON:0002791,5.85e-26,32;UBERON:0001869,7.29e-26,32;UBERON:0003056,1.02e-22,61;UBERON:0002619,1.30e-22,22;UBERON:0007023,2.39e-22,114;UBERON:0011216,1.29e-20,223;UBERON:0001950,2.90e-20,20;UBERON:0010371,3.50e-19,104;UBERON:0000956,4.04e-19,25;UBERON:0000203,4.04e-19,25;UBERON:0010314,1.47e-17,132;UBERON:0004121,1.68e-12,171;UBERON:0000924,1.68e-12,171;UBERON:0006601,1.68e-12,171;UBERON:0002420,4.31e-11,9;UBERON:0007245,4.31e-11,9;UBERON:0010009,4.31e-11,9;UBERON:0010011,4.31e-11,9;UBERON:0000454,4.31e-11,9;UBERON:0000125,1.42e-10,9;UBERON:0002308,1.42e-10,9;UBERON:0004111,2.67e-10,240;UBERON:0000025,2.31e-09,192;UBERON:0000200,7.78e-09,6;UBERON:0009663,1.81e-08,7;UBERON:0003076,2.53e-08,15;UBERON:0003057,2.53e-08,15;UBERON:0000349,1.77e-07,5;UBERON:0002021,4.41e-07,5;UBERON:0001871,6.17e-07,6;UBERON:0000483,7.55e-07,306 | |||
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| |||
|short_description=p2@SAMD12 | |||
}} |
Revision as of 03:17, 14 September 2013
Short description: | p2@SAMD12 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_SAMD12_5end |
Coexpression cluster: | NA |
Association with transcript: | -62bp_to_EF212289_5end |
EntrezGene: | SAMD12 |
HGNC: | 31750 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
carcinoma | 3.47e-08 | 106 |
cell type cancer | 6.67e-07 | 143 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.