FFCP PHASE1:Hg19::chr8:101118439..101118454,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=26166|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=24499|TSSclassifier=S|UniProt=Q8NE09,F5H1Q1,A8K944|association_with_transcript=-95bp_to_ENST00000360863,ENST00000427793,NM_015668,uc003yjb.1,uc003yjc.1,uc010mbo.1_5end|description=CAGE_peak_3_at_RGS22_5end|id=chr8:101118439..101118454,-|ontology_enrichment_celltype=CL:0000128!6.08e-08!7;CL:0000126!6.08e-08!7;CL:0000127!6.08e-08!7;CL:0002453!6.08e-08!7|ontology_enrichment_celltype_v019=CL:0000594;2.63e-07;3|ontology_enrichment_celltype_v019_2=CL:0000594,2.97e-07,3|ontology_enrichment_development_v019=UBERON:0005425;2.71e-19;1!UBERON:0009117;4.46e-17;10!UBERON:0005564;4.46e-17;10!UBERON:0003056;2.63e-07;3|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!6.42e-27!57;UBERON:0005068!6.42e-27!57;UBERON:0006241!6.42e-27!57;UBERON:0007135!6.42e-27!57;UBERON:0007023!7.49e-26!115;UBERON:0003075!1.69e-25!86;UBERON:0007284!1.69e-25!86;UBERON:0001017!1.70e-24!82;UBERON:0005743!3.15e-24!86;UBERON:0002346!8.67e-24!90;UBERON:0000073!1.73e-23!94;UBERON:0001016!1.73e-23!94;UBERON:0002616!3.21e-22!59;UBERON:0000955!4.10e-20!69;UBERON:0006238!4.10e-20!69;UBERON:0002780!6.36e-18!41;UBERON:0001890!6.36e-18!41;UBERON:0006240!6.36e-18!41;UBERON:0003080!2.47e-17!42;UBERON:0001893!6.10e-17!34;UBERON:0003056!8.78e-17!61;UBERON:0000153!3.66e-16!129;UBERON:0007811!3.66e-16!129;UBERON:0002791!4.67e-16!33;UBERON:0000033!1.37e-15!123;UBERON:0001869!8.51e-15!32;UBERON:0004121!1.54e-14!169;UBERON:0000924!7.15e-14!173;UBERON:0006601!7.15e-14!173;UBERON:0002020!1.03e-13!34;UBERON:0003528!1.03e-13!34;UBERON:0000956!1.90e-12!25;UBERON:0000203!1.90e-12!25;UBERON:0003076!3.99e-11!15;UBERON:0003057!3.99e-11!15;UBERON:0000119!1.11e-10!312;UBERON:0000483!6.58e-10!309;UBERON:0002619!2.30e-09!22;UBERON:0000475!3.52e-09!365;UBERON:0004732!8.09e-09!13;UBERON:0000025!3.02e-08!194;UBERON:0004111!5.64e-08!241;UBERON:0000481!1.18e-07!347;UBERON:0000477!1.26e-07!286;UBERON:0004733!2.15e-07!12;UBERON:0002028!2.15e-07!12;UBERON:0007277!2.15e-07!12;UBERON:0001950!3.11e-07!20;UBERON:0000922!5.90e-07!612;UBERON:0000064!9.97e-07!219|ontology_enrichment_uberon_v019=UBERON:0000941;2.71e-19;1!UBERON:0001785;2.71e-19;1!UBERON:0002464;2.71e-19;1!UBERON:0004904;2.71e-19;1!UBERON:0001021;2.71e-19;1!UBERON:0002021;2.33e-15;5!UBERON:0003127;2.48e-10;2!UBERON:0000007;2.48e-10;2!UBERON:0003714;2.48e-10;2!UBERON:0005162;2.48e-10;2!UBERON:0000122;2.48e-10;2!UBERON:0000473;3.52e-10;8!UBERON:0000991;1.85e-08;21!UBERON:0003135;1.20e-07;11|ontology_enrichment_uberon_v019_2=UBERON:0000941,2.71e-19,1;UBERON:0001785,2.71e-19,1;UBERON:0002464,2.71e-19,1;UBERON:0004904,2.71e-19,1;UBERON:0001021,2.71e-19,1;UBERON:0003902,2.71e-19,1;UBERON:0005425,2.71e-19,1;UBERON:0002021,3.88e-15,5;UBERON:0000007,2.27e-10,2;UBERON:0003714,2.49e-10,2;UBERON:0005162,2.49e-10,2;UBERON:0000122,2.49e-10,2;UBERON:0003127,2.72e-10,2;UBERON:0000473,3.52e-10,8;UBERON:0000991,1.71e-08,21;UBERON:0009196,1.71e-08,21;UBERON:0009117,1.71e-08,21;UBERON:0005564,1.71e-08,21;UBERON:0004176,3.93e-08,22;UBERON:0003135,1.20e-07,11|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0.123121058076788,0.408001382488506,0.313454721478088,0.85870796139317,0.136874425072884,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189069634328136,0.886917589850256,0.175669571386252,0.982343066232845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122834317311768,0,0,0.247266929278557,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0.117408694235822,0,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224262168690721,0,0.1466765716419,0,0,0,0,0,0,0,0.266422179016099,0,0.542621605391443,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0.167516265334349,0,0,0,0,0,0.500170521059677,0,0,0,0,0,0,0,0,0,0,0,0.195801157462741,0.343143423810856,0,0,0,0,0,0,0,0,0,0.128139149255701,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451199612907412,0.231046011313244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154048617114644,0.15350367472613,0,1.07420244868274,0.580066775656914,0.255679882248303,0,0,0,0,0,0,0,0,0,0,0,0,0,0.372158369359667,0,0,0,0.42793898803392,0,0,0,0,0.235624804691373,0,0,0,0.48763373908959,0,0,0.272999822815972,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0.0982490410131212,0,0,0,0.329294892959902,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.597743964753209,0,0.503865495708552,0,0,0,0,0,0,0.3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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=26166 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24499 | |||
|TSSclassifier=S | |||
|UniProt=Q8NE09,F5H1Q1,A8K944 | |||
|association_with_transcript=-95bp_to_ENST00000360863,ENST00000427793,NM_015668,uc003yjb.1,uc003yjc.1,uc010mbo.1_5end | |||
|description=CAGE_peak_3_at_RGS22_5end | |||
|id=chr8:101118439..101118454,- | |||
|ontology_enrichment_celltype=CL:0000128!6.08e-08!7;CL:0000126!6.08e-08!7;CL:0000127!6.08e-08!7;CL:0002453!6.08e-08!7 | |||
|ontology_enrichment_celltype_v019=CL:0000594;2.63e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000594,2.97e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0005425;2.71e-19;1!UBERON:0009117;4.46e-17;10!UBERON:0005564;4.46e-17;10!UBERON:0003056;2.63e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!6.42e-27!57;UBERON:0005068!6.42e-27!57;UBERON:0006241!6.42e-27!57;UBERON:0007135!6.42e-27!57;UBERON:0007023!7.49e-26!115;UBERON:0003075!1.69e-25!86;UBERON:0007284!1.69e-25!86;UBERON:0001017!1.70e-24!82;UBERON:0005743!3.15e-24!86;UBERON:0002346!8.67e-24!90;UBERON:0000073!1.73e-23!94;UBERON:0001016!1.73e-23!94;UBERON:0002616!3.21e-22!59;UBERON:0000955!4.10e-20!69;UBERON:0006238!4.10e-20!69;UBERON:0002780!6.36e-18!41;UBERON:0001890!6.36e-18!41;UBERON:0006240!6.36e-18!41;UBERON:0003080!2.47e-17!42;UBERON:0001893!6.10e-17!34;UBERON:0003056!8.78e-17!61;UBERON:0000153!3.66e-16!129;UBERON:0007811!3.66e-16!129;UBERON:0002791!4.67e-16!33;UBERON:0000033!1.37e-15!123;UBERON:0001869!8.51e-15!32;UBERON:0004121!1.54e-14!169;UBERON:0000924!7.15e-14!173;UBERON:0006601!7.15e-14!173;UBERON:0002020!1.03e-13!34;UBERON:0003528!1.03e-13!34;UBERON:0000956!1.90e-12!25;UBERON:0000203!1.90e-12!25;UBERON:0003076!3.99e-11!15;UBERON:0003057!3.99e-11!15;UBERON:0000119!1.11e-10!312;UBERON:0000483!6.58e-10!309;UBERON:0002619!2.30e-09!22;UBERON:0000475!3.52e-09!365;UBERON:0004732!8.09e-09!13;UBERON:0000025!3.02e-08!194;UBERON:0004111!5.64e-08!241;UBERON:0000481!1.18e-07!347;UBERON:0000477!1.26e-07!286;UBERON:0004733!2.15e-07!12;UBERON:0002028!2.15e-07!12;UBERON:0007277!2.15e-07!12;UBERON:0001950!3.11e-07!20;UBERON:0000922!5.90e-07!612;UBERON:0000064!9.97e-07!219 | |||
|ontology_enrichment_uberon_v019=UBERON:0000941;2.71e-19;1!UBERON:0001785;2.71e-19;1!UBERON:0002464;2.71e-19;1!UBERON:0004904;2.71e-19;1!UBERON:0001021;2.71e-19;1!UBERON:0002021;2.33e-15;5!UBERON:0003127;2.48e-10;2!UBERON:0000007;2.48e-10;2!UBERON:0003714;2.48e-10;2!UBERON:0005162;2.48e-10;2!UBERON:0000122;2.48e-10;2!UBERON:0000473;3.52e-10;8!UBERON:0000991;1.85e-08;21!UBERON:0003135;1.20e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,2.71e-19,1;UBERON:0001785,2.71e-19,1;UBERON:0002464,2.71e-19,1;UBERON:0004904,2.71e-19,1;UBERON:0001021,2.71e-19,1;UBERON:0003902,2.71e-19,1;UBERON:0005425,2.71e-19,1;UBERON:0002021,3.88e-15,5;UBERON:0000007,2.27e-10,2;UBERON:0003714,2.49e-10,2;UBERON:0005162,2.49e-10,2;UBERON:0000122,2.49e-10,2;UBERON:0003127,2.72e-10,2;UBERON:0000473,3.52e-10,8;UBERON:0000991,1.71e-08,21;UBERON:0009196,1.71e-08,21;UBERON:0009117,1.71e-08,21;UBERON:0005564,1.71e-08,21;UBERON:0004176,3.93e-08,22;UBERON:0003135,1.20e-07,11 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0.123121058076788,0.408001382488506,0.313454721478088,0.85870796139317,0.136874425072884,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189069634328136,0.886917589850256,0.175669571386252,0.982343066232845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122834317311768,0,0,0.247266929278557,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0.117408694235822,0,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224262168690721,0,0.1466765716419,0,0,0,0,0,0,0,0.266422179016099,0,0.542621605391443,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0.167516265334349,0,0,0,0,0,0.500170521059677,0,0,0,0,0,0,0,0,0,0,0,0.195801157462741,0.343143423810856,0,0,0,0,0,0,0,0,0,0.128139149255701,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451199612907412,0.231046011313244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154048617114644,0.15350367472613,0,1.07420244868274,0.580066775656914,0.255679882248303,0,0,0,0,0,0,0,0,0,0,0,0,0,0.372158369359667,0,0,0,0.42793898803392,0,0,0,0,0.235624804691373,0,0,0,0.48763373908959,0,0,0.272999822815972,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0.0982490410131212,0,0,0,0.329294892959902,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.597743964753209,0,0.503865495708552,0,0,0,0,0,0,0.394573622547734,0,0,0,0.278304294485554,1.99613798001194,0,0,0,0,0,0,0,0,0,0,0.241192877250816,0,0.110579259931225,0,0.219385397153973,0,0,0.923403102045565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404406797884062,0,0.234264445725339,0,0,0,0,0,0.91821828489147,0.63186579628488,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0.0969890164884194,0,0.451961481561065,0,0,0.0633107959558787,0,0,0.426905989478705,0,0,0,0.343189995723929,0,0,0,0,0,0,0,0,0.410716136675979,0,0,0,0,0,0,0,0.429226048136571,0.223171457441873,0.335917362433631,0,0,0,0,0,0,0,0.795229689809303,0.272406812223151,0,0,0,0,0,0.303747783290123,0,0,0.419636705079985,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0,0,0,0.320362237703084,1.72924735609633,0,0,0,0,0,0.544017803369474,0,0.306345576763462,0.655745261419609,0,0,0.122026264901963,0,0.573409195690071,0.221858103073705,0.310482014706917,0,0,0,0,0,0,0,0,0.233713309847224,0,0,0.50313580350515,0,0,0,0,0.147855149989634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.385375350578757,0,0,1.02558182120378,1.00828678488687,0.207471757392654,0.161475645631851,1.42769420259154,0,0,0,0,0.762764190934334,0,0,1.72983755203292,0,0,0,0,0,0.0675375846183947,0,0,0.126831620387814,0.546974809018219,0,0,0,0,0,0,0,1.59363533945908,0.0887023701626388,0,0,0.135939465953663,0.197318320688547,0,0,0.706437835654626,0,0,0,0,0,0.357382720883282,0,0,0,0,0,0,0,0,0.236664001461131,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0.485710993059139,0,0,0.83244063544298,0,0,0,0.0771741581079447,0,0,0.245148321753905,0,0.392616934229891,0.297046400327086,0.4226557275834,0,0,0,0,0,0,0,0.730336388246517,0,0.143339583151451,0,0.0679914901909147,0.436350690340377,0,0,0,0,0,0,0,0,0,0,0,2.5006970412019,2.67964130156179,0,0.310298987585686,0.213233981900981,0.476128862927481,0,0,0,0,0,0,0.342233301085281,0,0.143444410785353,1.33064142618405,0,0,0,0,0,0.733448665097199,0,0,0,0 | |||
|short_description=p3@RGS22 | |||
}} |
Revision as of 02:49, 14 September 2013
Short description: | p3@RGS22 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_RGS22_5end |
Coexpression cluster: | NA |
Association with transcript: | -95bp_to_ENST00000360863, ENST00000427793, NM_015668, uc003yjb.1, uc003yjc.1, uc010mbo.1_5end |
EntrezGene: | RGS22 |
HGNC: | 24499 |
UniProt: | Q8NE09F5H1Q1A8K944 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skeletal muscle satellite cell | 2.97e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 2.71e-19 | 1 |
cranial nerve | 2.71e-19 | 1 |
nerve trunk | 2.71e-19 | 1 |
nerve connecting eye with brain | 2.71e-19 | 1 |
nerve | 2.71e-19 | 1 |
retinal neural layer | 2.71e-19 | 1 |
presumptive neural retina | 2.71e-19 | 1 |
occipital lobe | 3.88e-15 | 5 |
pituitary gland | 2.27e-10 | 2 |
neural tissue | 2.49e-10 | 2 |
multi cell component structure | 2.49e-10 | 2 |
neuron projection bundle | 2.49e-10 | 2 |
open tracheal system trachea | 2.72e-10 | 2 |
testis | 3.52e-10 | 8 |
gonad | 1.71e-08 | 21 |
indifferent external genitalia | 1.71e-08 | 21 |
indifferent gonad | 1.71e-08 | 21 |
gonad primordium | 1.71e-08 | 21 |
external genitalia | 3.93e-08 | 22 |
male reproductive organ | 1.20e-07 | 11 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.