FFCP PHASE1:Mm9::chr3:88566061..88566074,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=42|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr3:88566061..88566074,-|id=chr3:88566061..88566074,-|ontology_enrichment_celltype=CL:0000540!4.27e-09!33;CL:0000047!4.27e-09!33;CL:0000031!4.27e-09!33;CL:0000404!4.27e-09!33;CL:0000393!4.13e-08!39;CL:0000211!4.13e-08!39;CL:0002319!3.34e-07!43;CL:0000221!5.97e-07!44;CL:0000133!5.97e-07!44|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!2.47e-16!71;UBERON:0003075!2.47e-16!71;UBERON:0007284!2.47e-16!71;UBERON:0004121!2.55e-16!102;UBERON:0000924!2.55e-16!102;UBERON:0006601!2.55e-16!102;UBERON:0001017!3.97e-14!73;UBERON:0005743!3.97e-14!73;UBERON:0000073!1.53e-13!75;UBERON:0001016!1.53e-13!75;UBERON:0000033!6.89e-09!63;UBERON:0001049!5.18e-08!52;UBERON:0005068!5.18e-08!52;UBERON:0006241!5.18e-08!52;UBERON:0007135!5.18e-08!52;UBERON:0002342!7.62e-08!10;UBERON:0005062!7.62e-08!10;UBERON:0000955!2.59e-07!50;UBERON:0006238!2.59e-07!50;UBERON:0003056!6.15e-07!49|ontology_enrichment_uberon_v019_2=UBERON:0002037,6.52e-23,4;UBERON:0002680,6.52e-23,4;UBERON:0001895,6.52e-23,4;UBERON:0010092,6.52e-23,4;UBERON:0006215,6.52e-23,4;UBERON:0004733,8.02e-16,6;UBERON:0004732,8.02e-16,6;UBERON:0002028,8.02e-16,6;UBERON:0007277,8.02e-16,6;UBERON:0003076,1.13e-08,12;UBERON:0003057,1.13e-08,12|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202316460859598,0,0,0,0,0,0,0,0,0.384218305321555,0,0,0.210324961351382,0,0.441737081903227,0,0,0,0,0.255374676170375,0.153606533256243,0,0.182975287204819,0,0,0,0.763991238884051,0.294628585473668,0.427115042397309,0.186399445825301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173485326766136,0.304465478312141,0.230615497256059,0,0.117588707135705,0,0,0,0,0,0,0,0,0,11.3101221679266,0,0,0,0,0.299581278809645,0.457500602818626,0.251308704225729,0,0,0,0.162241263067758,0,0,0,0,0.130120442962704,0,0.180062129805349,0,0.136072998302656,0.2562274405697,0.0937017245597288,0,0.215567992932842,0,0,0.219195732427575,0,0,0.205782136407943,0,0,0,0,0.207125772535502,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,0.308713837137853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.468846746368813,0,0,0.315508219416257,0.390438744296638,0.430846795465598,0,0.445597348164788,0,0,0.876767573733936,0,0.321321316421807,0,0.178065603667255,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129358683782755,0,0,0.178368817602071,0,0,0,0.21183207086382,0,0,0,0,0,0,0,0,0.170870880797853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0,0.183151624267265,0,0,0,0,0,0,0,0.755393897389701,0,0,0,0.51776031175182,0,0,0,0,0,0,0,0,0.320919209591815,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192906610981141,0.249810577937946,0,0,0,0,0|short_description=p@chr3:88566061..88566074,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=42 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr3:88566061..88566074,- | |||
|id=chr3:88566061..88566074,- | |||
|ontology_enrichment_celltype=CL:0000540!4.27e-09!33;CL:0000047!4.27e-09!33;CL:0000031!4.27e-09!33;CL:0000404!4.27e-09!33;CL:0000393!4.13e-08!39;CL:0000211!4.13e-08!39;CL:0002319!3.34e-07!43;CL:0000221!5.97e-07!44;CL:0000133!5.97e-07!44 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!2.47e-16!71;UBERON:0003075!2.47e-16!71;UBERON:0007284!2.47e-16!71;UBERON:0004121!2.55e-16!102;UBERON:0000924!2.55e-16!102;UBERON:0006601!2.55e-16!102;UBERON:0001017!3.97e-14!73;UBERON:0005743!3.97e-14!73;UBERON:0000073!1.53e-13!75;UBERON:0001016!1.53e-13!75;UBERON:0000033!6.89e-09!63;UBERON:0001049!5.18e-08!52;UBERON:0005068!5.18e-08!52;UBERON:0006241!5.18e-08!52;UBERON:0007135!5.18e-08!52;UBERON:0002342!7.62e-08!10;UBERON:0005062!7.62e-08!10;UBERON:0000955!2.59e-07!50;UBERON:0006238!2.59e-07!50;UBERON:0003056!6.15e-07!49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002037,6.52e-23,4;UBERON:0002680,6.52e-23,4;UBERON:0001895,6.52e-23,4;UBERON:0010092,6.52e-23,4;UBERON:0006215,6.52e-23,4;UBERON:0004733,8.02e-16,6;UBERON:0004732,8.02e-16,6;UBERON:0002028,8.02e-16,6;UBERON:0007277,8.02e-16,6;UBERON:0003076,1.13e-08,12;UBERON:0003057,1.13e-08,12 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202316460859598,0,0,0,0,0,0,0,0,0.384218305321555,0,0,0.210324961351382,0,0.441737081903227,0,0,0,0,0.255374676170375,0.153606533256243,0,0.182975287204819,0,0,0,0.763991238884051,0.294628585473668,0.427115042397309,0.186399445825301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173485326766136,0.304465478312141,0.230615497256059,0,0.117588707135705,0,0,0,0,0,0,0,0,0,11.3101221679266,0,0,0,0,0.299581278809645,0.457500602818626,0.251308704225729,0,0,0,0.162241263067758,0,0,0,0,0.130120442962704,0,0.180062129805349,0,0.136072998302656,0.2562274405697,0.0937017245597288,0,0.215567992932842,0,0,0.219195732427575,0,0,0.205782136407943,0,0,0,0,0.207125772535502,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,0.308713837137853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.468846746368813,0,0,0.315508219416257,0.390438744296638,0.430846795465598,0,0.445597348164788,0,0,0.876767573733936,0,0.321321316421807,0,0.178065603667255,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129358683782755,0,0,0.178368817602071,0,0,0,0.21183207086382,0,0,0,0,0,0,0,0,0.170870880797853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0,0.183151624267265,0,0,0,0,0,0,0,0.755393897389701,0,0,0,0.51776031175182,0,0,0,0,0,0,0,0,0.320919209591815,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192906610981141,0.249810577937946,0,0,0,0,0 | |||
|short_description=p@chr3:88566061..88566074,- | |||
}} |
Revision as of 02:48, 14 September 2013
Short description: | p@chr3:88566061..88566074, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr3:88566061..88566074, - |
Coexpression cluster: | MCL_coexpression_mm9:42 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cerebellum | 6.52e-23 | 4 |
regional part of metencephalon | 6.52e-23 | 4 |
metencephalon | 6.52e-23 | 4 |
future metencephalon | 6.52e-23 | 4 |
rhombic lip | 6.52e-23 | 4 |
segmental subdivision of hindbrain | 8.02e-16 | 6 |
segmental subdivision of nervous system | 8.02e-16 | 6 |
hindbrain | 8.02e-16 | 6 |
presumptive hindbrain | 8.02e-16 | 6 |
posterior neural tube | 1.13e-08 | 12 |
chordal neural plate | 1.13e-08 | 12 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.