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FFCP PHASE1:Mm9::chr3:72870267..72870281,+: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=626082|HGNC=|MCL_coexpression_id=2|UniProt=|association_with_transcript=0bp_to_NR_040557,uc008pmu.1_5end|description=CAGE_peak_2_at_LOC626082_5end|id=chr3:72870267..72870281,+|ontology_enrichment_celltype=CL:0000117!3.48e-09!23;CL:0000337!3.48e-09!23;CL:0000540!2.17e-07!33;CL:0000047!2.17e-07!33;CL:0000031!2.17e-07!33;CL:0000404!2.17e-07!33|ontology_enrichment_celltype_v019_2=CL:0000117,1.01e-07,23;CL:0000337,1.01e-07,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002020!1.54e-16!34;UBERON:0002346!4.34e-16!71;UBERON:0003075!4.34e-16!71;UBERON:0007284!4.34e-16!71;UBERON:0003056!3.20e-15!49;UBERON:0000033!9.34e-14!63;UBERON:0004121!9.64e-14!102;UBERON:0000924!9.64e-14!102;UBERON:0006601!9.64e-14!102;UBERON:0002791!2.31e-13!29;UBERON:0003528!2.31e-13!29;UBERON:0001893!2.31e-13!29;UBERON:0001049!3.27e-13!52;UBERON:0005068!3.27e-13!52;UBERON:0006241!3.27e-13!52;UBERON:0007135!3.27e-13!52;UBERON:0001017!1.20e-12!73;UBERON:0005743!1.20e-12!73;UBERON:0000073!2.45e-12!75;UBERON:0001016!2.45e-12!75;UBERON:0003080!3.45e-12!40;UBERON:0002780!1.01e-11!39;UBERON:0001890!1.01e-11!39;UBERON:0006240!1.01e-11!39;UBERON:0002619!1.79e-10!17;UBERON:0000955!1.81e-10!50;UBERON:0006238!1.81e-10!50;UBERON:0002616!2.71e-10!49;UBERON:0000956!9.89e-10!21;UBERON:0001869!9.89e-10!21;UBERON:0000203!9.89e-10!21;UBERON:0002021!3.20e-09!10;UBERON:0000411!3.20e-09!10;UBERON:0001950!3.20e-09!10|ontology_enrichment_uberon_v019_2=UBERON:0002020,1.60e-23,34;UBERON:0002619,3.32e-21,17;UBERON:0003528,3.14e-19,29;UBERON:0002791,3.14e-19,29;UBERON:0001893,3.14e-19,29;UBERON:0000956,2.25e-18,21;UBERON:0001869,2.25e-18,21;UBERON:0000203,2.25e-18,21;UBERON:0003056,9.06e-18,49;UBERON:0002021,3.88e-17,10;UBERON:0000411,3.88e-17,10;UBERON:0001950,3.88e-17,10;UBERON:0002346,5.34e-17,64;UBERON:0003075,5.34e-17,64;UBERON:0007284,5.34e-17,64;UBERON:0001049,9.55e-17,52;UBERON:0005068,9.55e-17,52;UBERON:0006241,9.55e-17,52;UBERON:0007135,9.55e-17,52;UBERON:0003080,1.55e-16,40;UBERON:0000073,7.72e-16,54;UBERON:0002780,1.12e-15,39;UBERON:0001890,1.12e-15,39;UBERON:0006240,1.12e-15,39;UBERON:0010371,4.53e-15,73;UBERON:0002616,1.62e-13,46;UBERON:0000955,4.31e-13,47;UBERON:0006238,4.31e-13,47;UBERON:0001017,6.75e-12,73;UBERON:0004121,1.75e-11,95;UBERON:0000924,1.75e-11,95;UBERON:0006601,1.75e-11,95;UBERON:0001016,2.28e-11,75;UBERON:0010314,3.63e-10,92|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.595303031057488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0,0,0,0,0,0,0,0,0,0,0,0,0.286533439938757,0,0.809265843438391,1.5869729378161,2.53532561402472,0,0,0,0,0,0.299600110518405,0,0.103689612308478,0,0.210324961351382,0.856952953211411,1.10434270475807,1.5923803897944,1.43768206527355,2.75765635983006,0,0.510749352340751,0.614426133024974,1.31886287730194,0.548925861614458,3.12548022334056,0.558365998002762,0.56276261003168,1.22238598221448,2.65165726926301,2.98980529678116,1.67759501242771,0.227178579999552,0,0,0,0,0,0,0,0.140444420131752,0,0,0,1.69012103732017,0,0,0,0,0,0,0.11418387971906,0,0,0.346970653532272,0,0.230615497256059,0.301445281105245,0.470354828542819,0,0,0,0,0,0.220841518460394,0,0,0,0,0,0,0,0,1.04853447583376,0.915001205637253,1.25654352112864,1.21677024134594,1.27857728665165,1.24672826735736,1.29793010454206,0,0,0,1.47309299120532,1.04096354370163,0.689706313300419,1.0803727788321,0.30140963567143,0.204109497453984,0.512454881139399,0.187403449119458,2.58703370739016,0,0,0.351902248327898,0.43839146485515,0,0.348252166522167,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0,0,3.57492912559016,3.60166143327496,0,0,0.213288250535234,0.232236671860439,0.38660238396628,0.201683524623343,0,0.380451252225118,0.949058123089023,0.494096864172033,1.00534083520108,1.98956472041151,1.36474860983384,0,0.432276099749388,0,0,0,0,0,0.193952487167626,0,0,0,0,0,0,0.166845105716094,0.196558995113203,0,0.202860121388503,0,0,0,0,0,0,0,0.312037673114561,0,0,0,0,0,0.162964976442026,0,0.234690248288502,0,0,0,0,0,0.159454768657487,0.163863314715738,0,0,0,0,0,0,0.321101179975584,0.35163505977661,0,0.252470927204373,0.315508219416257,0.780877488593277,0.215423397732799,0,0.222798674082394,0,0,0.292255857911312,0,0.321321316421807,0.567760340833074,0.178065603667255,0.162886959353576,1.64970122972535,0,0,0,0,0,0,0.258428293168221,0,0,0.316036757935816,0,0,0,0.18006109403131,0,0.428674070063185,0.177340233642274,0,0.329098041204242,0,1.40803024838226,0,0,0.16488625294148,0,0.241251699712623,0,0.328281799490123,0.874442509889552,0.370850604021019,0,0.619160603889667,0.370389054739423,0,0,0,0,0,0,0,0.790839983952838,1.01659733563424,1.83609079397062,1.25452977608681,1.52853794622324,1.48350781023303,2.31429676030941,0.785267825952089,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202725215290164,0,0,0,0,0,0,0,0,0,0,0,0,0.453460767230423,0,0,0,0,0.187682475451182,0.549454872801795,0,0.501572104035363,3.95326289831947,5.9842280745933,5.15605962095457,3.78077001156113,3.42541259885321,2.2661816921691,2.70009000092722,2.2516060161211,1.81256963593682,1.55328093525546,0,0.798049746802062,0.512200817262403,0.729320151204882,0.209613162627982,0.183843508450014,0.44449345560323,0.824140228955577,1.28367683836726,0.758091635291392,0.760437899670719,0.377252682772152,0.842773567228942,0.832326981263301,1.03383844120104,1.42888107384922,0.811190281613988,1.73618298417335,0.412085900803307,1.03039244094078,1.37147700954166,1.77475806159337,0.715308569841963,1.16277133305863,1.2234219453993,0.761531471025089,1.09756783723664,0.263069711437843,1.08643291076689,0,1.30498519936592,1.0835493061312,2.04615521584845,0.929621047115796,0.771626443924566,0.749431733813838,0.701794825336225,0.429742108096597,0,0.220591419119515,0.695603506861264|short_description=p2@LOC626082}}
|EntrezGene=626082
|HGNC=
|MCL_coexpression_id=2
|UniProt=
|association_with_transcript=0bp_to_NR_040557,uc008pmu.1_5end
|description=CAGE_peak_2_at_LOC626082_5end
|id=chr3:72870267..72870281,+
|ontology_enrichment_celltype=CL:0000117!3.48e-09!23;CL:0000337!3.48e-09!23;CL:0000540!2.17e-07!33;CL:0000047!2.17e-07!33;CL:0000031!2.17e-07!33;CL:0000404!2.17e-07!33
|ontology_enrichment_celltype_v019_2=CL:0000117,1.01e-07,23;CL:0000337,1.01e-07,23
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002020!1.54e-16!34;UBERON:0002346!4.34e-16!71;UBERON:0003075!4.34e-16!71;UBERON:0007284!4.34e-16!71;UBERON:0003056!3.20e-15!49;UBERON:0000033!9.34e-14!63;UBERON:0004121!9.64e-14!102;UBERON:0000924!9.64e-14!102;UBERON:0006601!9.64e-14!102;UBERON:0002791!2.31e-13!29;UBERON:0003528!2.31e-13!29;UBERON:0001893!2.31e-13!29;UBERON:0001049!3.27e-13!52;UBERON:0005068!3.27e-13!52;UBERON:0006241!3.27e-13!52;UBERON:0007135!3.27e-13!52;UBERON:0001017!1.20e-12!73;UBERON:0005743!1.20e-12!73;UBERON:0000073!2.45e-12!75;UBERON:0001016!2.45e-12!75;UBERON:0003080!3.45e-12!40;UBERON:0002780!1.01e-11!39;UBERON:0001890!1.01e-11!39;UBERON:0006240!1.01e-11!39;UBERON:0002619!1.79e-10!17;UBERON:0000955!1.81e-10!50;UBERON:0006238!1.81e-10!50;UBERON:0002616!2.71e-10!49;UBERON:0000956!9.89e-10!21;UBERON:0001869!9.89e-10!21;UBERON:0000203!9.89e-10!21;UBERON:0002021!3.20e-09!10;UBERON:0000411!3.20e-09!10;UBERON:0001950!3.20e-09!10
|ontology_enrichment_uberon_v019_2=UBERON:0002020,1.60e-23,34;UBERON:0002619,3.32e-21,17;UBERON:0003528,3.14e-19,29;UBERON:0002791,3.14e-19,29;UBERON:0001893,3.14e-19,29;UBERON:0000956,2.25e-18,21;UBERON:0001869,2.25e-18,21;UBERON:0000203,2.25e-18,21;UBERON:0003056,9.06e-18,49;UBERON:0002021,3.88e-17,10;UBERON:0000411,3.88e-17,10;UBERON:0001950,3.88e-17,10;UBERON:0002346,5.34e-17,64;UBERON:0003075,5.34e-17,64;UBERON:0007284,5.34e-17,64;UBERON:0001049,9.55e-17,52;UBERON:0005068,9.55e-17,52;UBERON:0006241,9.55e-17,52;UBERON:0007135,9.55e-17,52;UBERON:0003080,1.55e-16,40;UBERON:0000073,7.72e-16,54;UBERON:0002780,1.12e-15,39;UBERON:0001890,1.12e-15,39;UBERON:0006240,1.12e-15,39;UBERON:0010371,4.53e-15,73;UBERON:0002616,1.62e-13,46;UBERON:0000955,4.31e-13,47;UBERON:0006238,4.31e-13,47;UBERON:0001017,6.75e-12,73;UBERON:0004121,1.75e-11,95;UBERON:0000924,1.75e-11,95;UBERON:0006601,1.75e-11,95;UBERON:0001016,2.28e-11,75;UBERON:0010314,3.63e-10,92
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.595303031057488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0,0,0,0,0,0,0,0,0,0,0,0,0.286533439938757,0,0.809265843438391,1.5869729378161,2.53532561402472,0,0,0,0,0,0.299600110518405,0,0.103689612308478,0,0.210324961351382,0.856952953211411,1.10434270475807,1.5923803897944,1.43768206527355,2.75765635983006,0,0.510749352340751,0.614426133024974,1.31886287730194,0.548925861614458,3.12548022334056,0.558365998002762,0.56276261003168,1.22238598221448,2.65165726926301,2.98980529678116,1.67759501242771,0.227178579999552,0,0,0,0,0,0,0,0.140444420131752,0,0,0,1.69012103732017,0,0,0,0,0,0,0.11418387971906,0,0,0.346970653532272,0,0.230615497256059,0.301445281105245,0.470354828542819,0,0,0,0,0,0.220841518460394,0,0,0,0,0,0,0,0,1.04853447583376,0.915001205637253,1.25654352112864,1.21677024134594,1.27857728665165,1.24672826735736,1.29793010454206,0,0,0,1.47309299120532,1.04096354370163,0.689706313300419,1.0803727788321,0.30140963567143,0.204109497453984,0.512454881139399,0.187403449119458,2.58703370739016,0,0,0.351902248327898,0.43839146485515,0,0.348252166522167,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0,0,3.57492912559016,3.60166143327496,0,0,0.213288250535234,0.232236671860439,0.38660238396628,0.201683524623343,0,0.380451252225118,0.949058123089023,0.494096864172033,1.00534083520108,1.98956472041151,1.36474860983384,0,0.432276099749388,0,0,0,0,0,0.193952487167626,0,0,0,0,0,0,0.166845105716094,0.196558995113203,0,0.202860121388503,0,0,0,0,0,0,0,0.312037673114561,0,0,0,0,0,0.162964976442026,0,0.234690248288502,0,0,0,0,0,0.159454768657487,0.163863314715738,0,0,0,0,0,0,0.321101179975584,0.35163505977661,0,0.252470927204373,0.315508219416257,0.780877488593277,0.215423397732799,0,0.222798674082394,0,0,0.292255857911312,0,0.321321316421807,0.567760340833074,0.178065603667255,0.162886959353576,1.64970122972535,0,0,0,0,0,0,0.258428293168221,0,0,0.316036757935816,0,0,0,0.18006109403131,0,0.428674070063185,0.177340233642274,0,0.329098041204242,0,1.40803024838226,0,0,0.16488625294148,0,0.241251699712623,0,0.328281799490123,0.874442509889552,0.370850604021019,0,0.619160603889667,0.370389054739423,0,0,0,0,0,0,0,0.790839983952838,1.01659733563424,1.83609079397062,1.25452977608681,1.52853794622324,1.48350781023303,2.31429676030941,0.785267825952089,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202725215290164,0,0,0,0,0,0,0,0,0,0,0,0,0.453460767230423,0,0,0,0,0.187682475451182,0.549454872801795,0,0.501572104035363,3.95326289831947,5.9842280745933,5.15605962095457,3.78077001156113,3.42541259885321,2.2661816921691,2.70009000092722,2.2516060161211,1.81256963593682,1.55328093525546,0,0.798049746802062,0.512200817262403,0.729320151204882,0.209613162627982,0.183843508450014,0.44449345560323,0.824140228955577,1.28367683836726,0.758091635291392,0.760437899670719,0.377252682772152,0.842773567228942,0.832326981263301,1.03383844120104,1.42888107384922,0.811190281613988,1.73618298417335,0.412085900803307,1.03039244094078,1.37147700954166,1.77475806159337,0.715308569841963,1.16277133305863,1.2234219453993,0.761531471025089,1.09756783723664,0.263069711437843,1.08643291076689,0,1.30498519936592,1.0835493061312,2.04615521584845,0.929621047115796,0.771626443924566,0.749431733813838,0.701794825336225,0.429742108096597,0,0.220591419119515,0.695603506861264
|short_description=p2@LOC626082
}}

Revision as of 02:31, 14 September 2013

Short description:p2@LOC626082
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_LOC626082_5end
Coexpression cluster:MCL_coexpression_mm9:2
Association with transcript: 0bp_to_NR_040557, uc008pmu.1_5end
EntrezGene:LOC626082
Link to Zenbu:ZENBU


View on UCSC genome browser

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CAGE Expression

Sample

p2@LOC626082

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.16
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.60
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.13
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.81
Mouse Granule cells, donor2.CNhs12357.11731-123E31.59
Mouse Granule cells, donor3.CNhs12108.11636-122C72.54
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.10
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.21
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.86
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.10
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.59
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21.44
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D62.76
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.51
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.61
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.32
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.55
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D83.13
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.56
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.56
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.22
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D62.65
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F62.99
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E11.68
Mouse Schwann, donor1.CNhs12507.11728-123D90.23
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.14
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.69
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.11
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.35
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.30
adrenal gland, neonate N00.CNhs11191.1311-23C10.47
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A41.05
corpus striatum, adult.CNhs10487.19-21D80.92
corpus striatum, neonate N00.CNhs11226.630-43F11.26
cortex, adult.CNhs10473.12-14D51.22
cortex, neonate N30.CNhs11107.1392-42F21.28
diencephalon, adult.CNhs10482.20-12F21.25
diencephalon, neonate N30.CNhs11201.1388-42B21.30
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G41.47
eyeball, embryo E12.CNhs11016.345-16C61.04
eyeball, embryo E14.CNhs10521.399-16E20.69
eyeball, embryo E15.CNhs10593.426-16C91.08
eyeball, embryo E17.CNhs11023.1261-18D40.30
eyeball, neonate N00.CNhs11207.633-15C60.20
eyeball, neonate N01.CNhs11140.1532-43E70.51
eyeball, neonate N02.CNhs11205.1551-44G80.19
eyeball, neonate N16.CNhs11188.777-19A22.59
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.35
forelimb, embryo E14.CNhs10577.413-26A80.44
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.08
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E83.57
hippocampus, neonate N00.CNhs11228.627-43G13.60
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.39
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.38
intestine, neonate N00.CNhs11126.644-26D10.95
intestine, neonate N01.CNhs11192.1322-23E90.49
intestine, neonate N06.CNhs11102.688-20B81.01
intestine, neonate N07.CNhs11095.720-20F21.99
intestine, neonate N10.CNhs11098.755-23A51.36
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.43
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.00
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.00
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.16
lung, neonate N20.CNhs11109.822-18A40.16
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C20.32
medulla oblongata, neonate N30.CNhs11200.1396-42A30.35
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.78
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.22
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.32
ovary, adult.CNhs10507.91-2I70.57
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I40.16
oviduct, adult pregnant day01.CNhs10500.988-6G61.65
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.18
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.43
pituitary gland, embryo E15.CNhs10592.427-16B90.18
pituitary gland, embryo E16.CNhs11036.449-43F60.00
pituitary gland, embryo E17.CNhs11039.1265-44F50.33
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I71.41
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.16
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.24
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.33
small intestine, neonate N16.CNhs11114.790-21I10.87
spinal cord, adult.CNhs10505.24-13C90.37
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.62
spleen, embryo E18.CNhs11011.1271-21F20.37
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.79
stomach, embryo E15.CNhs10603.1252-16G81.02
stomach, embryo E16.CNhs11022.459-17D41.84
stomach, embryo E17.CNhs11006.1035-18D51.25
stomach, embryo E18.CNhs10999.1286-20C61.53
stomach, neonate N03.CNhs11193.1340-24B81.48
stomach, neonate N07.CNhs11210.718-18A92.31
stomach, neonate N25.CNhs11104.1355-25E40.79
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.45
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.19
uterus, adult.CNhs10509.92-27E50.55
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A13.95
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A25.98
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A35.16
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D73.78
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A43.43
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A52.27
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A62.70
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A72.25
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A81.81
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A91.55
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.80
whole body, embryo E13.CNhs10512.372-23H20.51
whole body, embryo E14.5.CNhs10578.420-27D20.73
whole body, embryo E14.CNhs10519.395-14B10.21
whole body, embryo E16.CNhs10514.453-14F20.18
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.84
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.83
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.81
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.74
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.37
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.72
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.16
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.22
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.10
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.09
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.30
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.08
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.05
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.93
whole body, embryo E17.5.CNhs10513.490-9F90.77
whole body, embryo E17.CNhs10517.475-3I50.75
whole body, embryo E18.CNhs10516.493-3B30.70
whole body, neonate N00.CNhs10525.657-19C20.43
whole body, neonate N01.CNhs10576.659-23C60.00
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.70





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)1.01e-0723
neuroblast (sensu Vertebrata)1.01e-0723

Uber anatomy
Ontology termp-valuen
gray matter1.60e-2334
regional part of cerebral cortex3.32e-2117
brain grey matter3.14e-1929
regional part of telencephalon3.14e-1929
telencephalon3.14e-1929
cerebral cortex2.25e-1821
cerebral hemisphere2.25e-1821
pallium2.25e-1821
pre-chordal neural plate9.06e-1849
occipital lobe3.88e-1710
visual cortex3.88e-1710
neocortex3.88e-1710
neurectoderm5.34e-1764
neural plate5.34e-1764
presumptive neural plate5.34e-1764
neural tube9.55e-1752
neural rod9.55e-1752
future spinal cord9.55e-1752
neural keel9.55e-1752
anterior neural tube1.55e-1640
regional part of nervous system7.72e-1654
regional part of forebrain1.12e-1539
forebrain1.12e-1539
future forebrain1.12e-1539
ecto-epithelium4.53e-1573
regional part of brain1.62e-1346
brain4.31e-1347
future brain4.31e-1347
central nervous system6.75e-1273
ectoderm-derived structure1.75e-1195
ectoderm1.75e-1195
presumptive ectoderm1.75e-1195
nervous system2.28e-1175
structure with developmental contribution from neural crest3.63e-1092







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

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