FFCP PHASE1:Hg19::chr7:7680221..7680274,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=6119|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=10291|TSSclassifier=S|UniProt=|association_with_transcript=-13bp_to_ENST00000462723_5end|description=CAGE_peak_5_at_RPA3_5end|id=chr7:7680221..7680274,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000039;8.08e-12;7!CL:0000586;8.08e-12;7!CL:0002253;5.68e-07;2|ontology_enrichment_celltype_v019_2=CL:0000039,5.30e-12,7;CL:0000586,5.30e-12,7;CL:0002253,4.51e-07,2|ontology_enrichment_development_v019=UBERON:0009117;3.39e-08;10!UBERON:0005564;3.39e-08;10|ontology_enrichment_disease=DOID:14566!1.73e-11!239;DOID:162!1.75e-11!235;DOID:0050687!1.91e-10!143;DOID:305!2.95e-10!106|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=UBERON:0001052;2.51e-07;4!UBERON:0000473;4.62e-07;8!UBERON:0001905;5.68e-07;2!UBERON:0002757;5.68e-07;2!UBERON:0010134;5.68e-07;2!UBERON:0005408;5.68e-07;2!UBERON:0001899;5.68e-07;2|ontology_enrichment_uberon_v019_2=UBERON:0001052,1.21e-07,4;UBERON:0001905,1.88e-07,2;UBERON:0002757,1.88e-07,2;UBERON:0010134,1.88e-07,2;UBERON:0005408,1.88e-07,2;UBERON:0001899,1.88e-07,2;UBERON:0000473,4.94e-07,8|phase1_expression=0,0.428201047781966,0.140954404095971,0,0,0,0,0,0.522371256399677,0,0,0.218441372130172,1.05506791291381,0.123766352960047,0,0,0,0,0,0.861847406537515,0,0,0.572471974262113,0.410623275218653,0.251085279189606,0.305653622991805,0.410502947249729,0.314843125254717,0,0,0.154816123316076,0,0.6024118375565,0,0.542270404062111,0.426507697462265,0,0,0,0,0,0,0.515151135268373,0.145398238779565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306083892370903,0.320929027076094,0,0,0,0,0,0,0,0,0,0.217188844705117,0,0,0,0.211255286311942,0,0,0.112328631146495,0,0,0.285012743741249,0.39783335439818,0,0,0,0.889509253863555,0,0,0,0,0.954053754535364,0,0,0.382273228125229,1.32171328579026,0,0.526768169550154,0,0,0.205601498999509,0,0,0,0,0.111410456885174,0,0,0.270803863765016,0.128091319725675,0.130059347559878,0.164437904603676,0.276350017785848,0,0.296573126324121,0.267540828089713,0,0.113309342697566,0.383220493601921,0.34362744548263,0,0,0,0.950452044448374,0.451725357233318,0,0,0.236777252044017,1.64225599384209,0,0.267440195783507,0.289648807765598,0,0.670700859703636,0.255725123687061,0.722878304769133,0,0.144846518960824,0,0.486634870302636,0.378139268656271,0.443458794925128,0.175669571386252,3.27447688744282,0.728590576585084,0.370784442784429,0,0,0,0,0,0,0,0.860234595106124,0,0,0.419499436209906,0.275118041940067,0.208994966536811,0,0,0,0.402829317109147,0.760272105718513,0,0.735326160691737,0,0.17859945656816,0,0.112611480483322,0,0.949265659568129,0.183201743930407,0,0,0,0,0,0.132409180813219,0.286836620748814,0,0,0,0,0,0.134710672069688,0,0.302714855289863,0,0.468642863667593,0.312160076830321,0,0.298897361103602,0.23486899728753,0.809364721840658,0.280901613404497,0.204154171254893,0.245668634623536,0.103325781175765,1.18800285728205,0.247266929278557,0,0,0.505008341862199,0.500474079487857,0.554128230968366,0,0,0,0,0,0,0,0,0.206105058476878,0,0,0.168776332241266,0,0,0.0920498986422993,0,0,0.403008392910561,0.339121184620975,0.193260853163297,0,0.286804595389004,0.975789649036763,0.662648841607426,0.580969714347592,1.0366105501537,0.756962552626885,1.45990943630332,0,0,0,0,0,0.473227200159376,0.842923450390509,0.723033089650446,0.55146986366197,0.435758888184812,0.71181185733329,0.808987848960987,0.588664395376038,0,0,0,0,1.47008711385542,2.53510069643662,0,1.18157981336281,0.882926198829301,0.737930631258681,0,0,0,0.402115889646523,0.185176890317059,0,0,0,0.231860809950154,0,0.144366447761074,0.462985512576611,0.380508304469197,1.58040879591855,0,0,0,0.297262324577456,0,0.16798212819886,0.141775097242386,0.447792613514241,0.290633938513962,0,0,0.088048434013226,0,0.288239906833923,0.12624243342638,0.063497894292169,0,0,1.71072446022705,0,0,0,0.336393253036082,0,0.36669142910475,0,0,0,0.26593811658487,0,0.771622122786426,0,0,0.142977993658148,0,0.823240336780769,0.325736184293735,0.355391948742546,0.791951872933429,0,0,0.099972991182057,0,0,2.10833939483032,0.239624855491583,0,0,0.144781306667579,0,0,0,0,0,0.128343036279748,0.508189248444927,0,0,0.335032530668698,0,0,0,0,0.12269149171914,0,0.271265023699736,0,0.178428988797162,0,0,0,0,0,1.32845119707087,0.184369168541703,0.173767228936166,0.391602314925481,0.343143423810856,0,0,0,0.606255142892519,1.66435439510497,0.30239029332968,0.248107807818777,0.153461973288062,0,0.128139149255701,0,0.160853921143607,0,0.308419387605311,0,0.657017248110473,0,0,0.725156697549733,0.200506470303285,0.276242966807689,0.68888668898764,0.182091168006717,0.262248829918848,0,0.15403067420883,0,1.46139224653261,0.316654886678627,0,0,0,0,0.541892875087706,0,0.764628819135115,0.831076008928724,0.671624264166535,0.657779629937804,0.784306353074702,0.256450125116389,0.328014645699706,0.325378394664303,0.515205058238611,0.0915694648183434,0.082509499920588,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=6119 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10291 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=-13bp_to_ENST00000462723_5end | |||
|description=CAGE_peak_5_at_RPA3_5end | |||
|id=chr7:7680221..7680274,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000039;8.08e-12;7!CL:0000586;8.08e-12;7!CL:0002253;5.68e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,5.30e-12,7;CL:0000586,5.30e-12,7;CL:0002253,4.51e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0009117;3.39e-08;10!UBERON:0005564;3.39e-08;10 | |||
|ontology_enrichment_disease=DOID:14566!1.73e-11!239;DOID:162!1.75e-11!235;DOID:0050687!1.91e-10!143;DOID:305!2.95e-10!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0001052;2.51e-07;4!UBERON:0000473;4.62e-07;8!UBERON:0001905;5.68e-07;2!UBERON:0002757;5.68e-07;2!UBERON:0010134;5.68e-07;2!UBERON:0005408;5.68e-07;2!UBERON:0001899;5.68e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001052,1.21e-07,4;UBERON:0001905,1.88e-07,2;UBERON:0002757,1.88e-07,2;UBERON:0010134,1.88e-07,2;UBERON:0005408,1.88e-07,2;UBERON:0001899,1.88e-07,2;UBERON:0000473,4.94e-07,8 | |||
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| |||
|short_description=p5@RPA3 | |||
}} |
Revision as of 02:03, 14 September 2013
Short description: | p5@RPA3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_RPA3_5end |
Coexpression cluster: | NA |
Association with transcript: | -13bp_to_ENST00000462723_5end |
EntrezGene: | RPA3 |
HGNC: | 10291 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 5.30e-12 | 7 |
germ cell | 5.30e-12 | 7 |
epithelial cell of large intestine | 4.51e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
rectum | 1.21e-07 | 4 |
pineal body | 1.88e-07 | 2 |
regional part of epithalamus | 1.88e-07 | 2 |
secretory circumventricular organ | 1.88e-07 | 2 |
circumventricular organ | 1.88e-07 | 2 |
epithalamus | 1.88e-07 | 2 |
testis | 4.94e-07 | 8 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.