FFCP PHASE1:Mm9::chr3:142544998..142545006,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=109333|HGNC=|UniProt=Q8BWW9,Q8BVK4|association_with_transcript=-30bp_to_ENSMUST00000043812,NM_178654,uc008rpe.2,uc008rpf.2,uc008rpg.2_5end|description=CAGE_peak_3_at_Pkn2_5end|id=chr3:142544998..142545006,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0005156,8.35e-07,26;UBERON:0000990,8.35e-07,26|phase1_expression=0.160148847104794,0.348975407639361,0.454999239389536,0.60492842261366,0.500895729946347,0.503637815735669,0.467225281191051,0.129123323441576,0.422366166455,0.468129052643987,0,0.319088635981346,0.342401459862411,0.262261207256992,1.99865857089398,1.41732687172878,1.39912375625629,0.630924330716475,0.137114433605739,0.42438965179803,1.61582251287033,0.297872853602656,0.261199789138935,0.639969691173627,0.45881856213434,0,0.430761996159075,0.646413698057667,0.190023419456374,0.756090389279792,0.221730510655305,0,0.61506478758457,0,0,0.332469290716985,0.204169356262369,0.837063261473815,0,0.523523743973798,0,0.683045484958446,0,1.38486499773135,1.11514624341466,1.46837401729345,0.782391344348039,0.436050312760893,0.219686182734472,0.194429899074283,0.699932108126813,0,0.167782606057736,0.725362142011344,0,0.514518872071894,0.85960031981627,1.54701627683233,0,1.05798195854407,0,0,1.77858959222228,0,0,0,0,0.384218305321555,0.414758449233911,0.405017814995072,1.05162480675691,0,0.220868540951614,0,0.0958454710182364,0,0,0.127687338085188,0.614426133024974,0,0.365950574409639,1.04182674111352,0.279182999001381,0.56276261003168,0.30559649555362,0.589257170947335,0.427115042397309,0.372798891650601,1.28734528666413,0.982430281388212,0.289864488701678,0,0.679971333707751,0,0,0.448026887097336,0.280888840263504,0.511290967734173,0.779358013808606,0,0.14084341977668,0,2.54805239706646,0,0.865964164044856,1.26679932737549,0.505524445014783,0.34255163915718,0.258937883647172,0.148442139064825,1.90833859442749,1.21786191324856,0,0.452167921657868,1.29347577849275,0.502666365318702,1.97755974187499,0.578397427679647,0,0.647067399789637,0.220841518460394,0.484875253135222,0,0.878342391034642,0.41889341362691,0.510914110417183,0.11981512450592,0,0.254140454146129,0.599162557619291,0,0.251308704225729,0.521472960576829,0.255715457330331,0.41557608911912,0.811206315338788,1.01839363850316,1.11966273549084,0.505445516867349,0.631325567659422,1.43132487258974,1.60931473103431,0.540186389416048,0.60281927134286,0.136072998302656,0.512454881139399,0,0,0.646703978798527,0.756424320671277,1.05570674498369,1.09597866213787,1.11218899690239,0.696504333044333,0,0.59710280045548,0,0.257347907114715,0,1.44988040774851,0.703578179943289,1.44049649168812,1.42046841351126,0.787056926989615,1.07986979021165,0.465067889500816,0.536546802799238,0.583826711835847,0.16455984991348,0.32833492815819,0.0810688095458557,0,0.439100230582101,0.268412837520744,0.210289948564127,0.720332286654991,0.330418782983798,0.793351699990633,0.639864751605702,1.39342003116263,0.644337306610467,0.403367049246685,0.889512175379481,0.760902504450237,0,0,0.251335208800269,0.198956472041151,0.58489226135736,0,0.864552199498777,0.199141273254367,1.13800740571849,1.25673363870702,2.25415471346161,0.814605311381257,0.387904974335251,0.280543279561274,0.632365371242573,0.885660887877613,0.627994911365499,1.35736880313981,0.296452627087149,1.00107063429656,0.786235980452812,1.57403478669398,2.43432145666204,2.41177159752417,1.52775511068852,1.43848068725405,0.810676133875177,0.549122826376163,0,0.372140947668503,0.624075346229121,1.01031551178845,1.25578189465339,0,0.554259570499814,1.70542270593436,0.977789858652155,1.01847051465113,0.469380496577004,0.167506257441816,0.714130922658041,0.390267295715598,0.315270288212382,0.221464689648775,0.318909537314974,0.655453258862952,0.172684981865896,0.578596234326046,0,0,0,0.827810238914197,0.160550589987792,0.35163505977661,0.819674726883377,0.252470927204373,1.26203287766503,1.56175497718655,0.861693590931196,1.19484398976276,0.891194696329576,0,0.809621403349789,1.16902343164525,2.76701444562566,0.321321316421807,0.567760340833074,0.35613120733451,0.162886959353576,1.48473110675282,1.32745138339963,0.971122544619926,0,0.377210159511796,0,1.22974059177571,0.258428293168221,1.09060118843252,0.712994756769443,0,0,1.03135543248187,1.02131881726136,0.900305470156551,0.129358683782755,2.14337035031592,0.886701168211368,1.78368817602071,0.658196082408484,0.913394847343798,3.05073220482823,3.38931313382112,0.661585194164886,0.65954501176592,0.484393280087717,0.241251699712623,0.477489376012546,0.492422699235184,0,0.927126510052548,1.19609616558497,0.82554747185289,0.925972636848558,1.88368457004691,1.50363650493128,2.28778173206523,0.169978429993855,0.139951452323658,0.138199973804424,0,1.58167996790568,1.21991680276109,0.648032044930808,0.418176592028937,1.09181281873089,0.269728692769641,0.578574190077352,0.523511883968059,0.518459893167171,0.621339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| ||
|EntrezGene=109333 | |||
|HGNC= | |||
|UniProt=Q8BWW9,Q8BVK4 | |||
|association_with_transcript=-30bp_to_ENSMUST00000043812,NM_178654,uc008rpe.2,uc008rpf.2,uc008rpg.2_5end | |||
|description=CAGE_peak_3_at_Pkn2_5end | |||
|id=chr3:142544998..142545006,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005156,8.35e-07,26;UBERON:0000990,8.35e-07,26 | |||
|phase1_expression=0.160148847104794,0.348975407639361,0.454999239389536,0.60492842261366,0.500895729946347,0.503637815735669,0.467225281191051,0.129123323441576,0.422366166455,0.468129052643987,0,0.319088635981346,0.342401459862411,0.262261207256992,1.99865857089398,1.41732687172878,1.39912375625629,0.630924330716475,0.137114433605739,0.42438965179803,1.61582251287033,0.297872853602656,0.261199789138935,0.639969691173627,0.45881856213434,0,0.430761996159075,0.646413698057667,0.190023419456374,0.756090389279792,0.221730510655305,0,0.61506478758457,0,0,0.332469290716985,0.204169356262369,0.837063261473815,0,0.523523743973798,0,0.683045484958446,0,1.38486499773135,1.11514624341466,1.46837401729345,0.782391344348039,0.436050312760893,0.219686182734472,0.194429899074283,0.699932108126813,0,0.167782606057736,0.725362142011344,0,0.514518872071894,0.85960031981627,1.54701627683233,0,1.05798195854407,0,0,1.77858959222228,0,0,0,0,0.384218305321555,0.414758449233911,0.405017814995072,1.05162480675691,0,0.220868540951614,0,0.0958454710182364,0,0,0.127687338085188,0.614426133024974,0,0.365950574409639,1.04182674111352,0.279182999001381,0.56276261003168,0.30559649555362,0.589257170947335,0.427115042397309,0.372798891650601,1.28734528666413,0.982430281388212,0.289864488701678,0,0.679971333707751,0,0,0.448026887097336,0.280888840263504,0.511290967734173,0.779358013808606,0,0.14084341977668,0,2.54805239706646,0,0.865964164044856,1.26679932737549,0.505524445014783,0.34255163915718,0.258937883647172,0.148442139064825,1.90833859442749,1.21786191324856,0,0.452167921657868,1.29347577849275,0.502666365318702,1.97755974187499,0.578397427679647,0,0.647067399789637,0.220841518460394,0.484875253135222,0,0.878342391034642,0.41889341362691,0.510914110417183,0.11981512450592,0,0.254140454146129,0.599162557619291,0,0.251308704225729,0.521472960576829,0.255715457330331,0.41557608911912,0.811206315338788,1.01839363850316,1.11966273549084,0.505445516867349,0.631325567659422,1.43132487258974,1.60931473103431,0.540186389416048,0.60281927134286,0.136072998302656,0.512454881139399,0,0,0.646703978798527,0.756424320671277,1.05570674498369,1.09597866213787,1.11218899690239,0.696504333044333,0,0.59710280045548,0,0.257347907114715,0,1.44988040774851,0.703578179943289,1.44049649168812,1.42046841351126,0.787056926989615,1.07986979021165,0.465067889500816,0.536546802799238,0.583826711835847,0.16455984991348,0.32833492815819,0.0810688095458557,0,0.439100230582101,0.268412837520744,0.210289948564127,0.720332286654991,0.330418782983798,0.793351699990633,0.639864751605702,1.39342003116263,0.644337306610467,0.403367049246685,0.889512175379481,0.760902504450237,0,0,0.251335208800269,0.198956472041151,0.58489226135736,0,0.864552199498777,0.199141273254367,1.13800740571849,1.25673363870702,2.25415471346161,0.814605311381257,0.387904974335251,0.280543279561274,0.632365371242573,0.885660887877613,0.627994911365499,1.35736880313981,0.296452627087149,1.00107063429656,0.786235980452812,1.57403478669398,2.43432145666204,2.41177159752417,1.52775511068852,1.43848068725405,0.810676133875177,0.549122826376163,0,0.372140947668503,0.624075346229121,1.01031551178845,1.25578189465339,0,0.554259570499814,1.70542270593436,0.977789858652155,1.01847051465113,0.469380496577004,0.167506257441816,0.714130922658041,0.390267295715598,0.315270288212382,0.221464689648775,0.318909537314974,0.655453258862952,0.172684981865896,0.578596234326046,0,0,0,0.827810238914197,0.160550589987792,0.35163505977661,0.819674726883377,0.252470927204373,1.26203287766503,1.56175497718655,0.861693590931196,1.19484398976276,0.891194696329576,0,0.809621403349789,1.16902343164525,2.76701444562566,0.321321316421807,0.567760340833074,0.35613120733451,0.162886959353576,1.48473110675282,1.32745138339963,0.971122544619926,0,0.377210159511796,0,1.22974059177571,0.258428293168221,1.09060118843252,0.712994756769443,0,0,1.03135543248187,1.02131881726136,0.900305470156551,0.129358683782755,2.14337035031592,0.886701168211368,1.78368817602071,0.658196082408484,0.913394847343798,3.05073220482823,3.38931313382112,0.661585194164886,0.65954501176592,0.484393280087717,0.241251699712623,0.477489376012546,0.492422699235184,0,0.927126510052548,1.19609616558497,0.82554747185289,0.925972636848558,1.88368457004691,1.50363650493128,2.28778173206523,0.169978429993855,0.139951452323658,0.138199973804424,0,1.58167996790568,1.21991680276109,0.648032044930808,0.418176592028937,1.09181281873089,0.269728692769641,0.578574190077352,0.523511883968059,0.518459893167171,0.621339313086926,3.94585057078933,1.49516546043979,0.827292452285488,1.75006069509643,1.54991788173277,0.844780627453891,1.05621514781179,0.781226309063701,2.09718688851422,2.17425708743405,2.88030006257865,1.58005560314089,0.608175645870493,0.616265742988964,0.389762468933385,0.179026695667481,0.39736270956253,0.600977247599844,0.443068581523732,0.403865799792591,0.228620419965,0.201652370273681,0.584747284438515,0,0.467507608726276,0.680191150845634,4.88369097422942,3.7679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| |||
|short_description=p3@Pkn2 | |||
}} | |||
Revision as of 01:43, 14 September 2013
| Short description: | p3@Pkn2 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_3_at_Pkn2_5end |
| Coexpression cluster: | NA |
| Association with transcript: | -30bp_to_ENSMUST00000043812, NM_178654, uc008rpe.2, uc008rpf.2, uc008rpg.2_5end |
| EntrezGene: | Pkn2 |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| reproductive structure | 8.35e-07 | 26 |
| reproductive system | 8.35e-07 | 26 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
