FFCP PHASE1:Hg19::chr7:27183156..27183167,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=3202|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=5106|TSSclassifier=S|UniProt=P20719,Q6FG31|association_with_transcript=58bp_to_AB587591,BT009744,CR542256,CR542277,DQ890593,DQ893761_5end|coexpression_cluster_id=C1992|description=CAGE_peak_8_at_HOXA5_5end|id=chr7:27183156..27183167,-|ontology_enrichment_celltype=CL:0002334!2.34e-09!12|ontology_enrichment_celltype_v019=CL:0002593;3.85e-17;2!CL:0002600;3.48e-16;2!CL:0002595;7.74e-15;5!CL:0000322;4.19e-11;3!CL:0000094;2.87e-09;8!CL:0002581;5.97e-09;1!CL:0000081;7.27e-07;11|ontology_enrichment_celltype_v019_2=CL:0002593,3.87e-17,2;CL:0002600,2.19e-16,2;CL:0002595,1.10e-14,5;CL:0000322,4.66e-11,3;CL:0000094,2.76e-09,8;CL:0002581,4.19e-09,1;CL:0000081,7.07e-07,11|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:2394!7.41e-08!14|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0009569!3.30e-07!113|ontology_enrichment_uberon_v019=UBERON:0002456;3.85e-17;2!UBERON:0003834;7.74e-15;5!UBERON:0001533;7.74e-15;5!UBERON:0007196;1.55e-12;15!UBERON:0001558;1.55e-12;15!UBERON:0004821;4.19e-11;3!UBERON:0007499;4.19e-11;3!UBERON:0003215;4.19e-11;3!UBERON:0010368;4.19e-11;3!UBERON:0009911;4.19e-11;3!UBERON:0002299;4.19e-11;3!UBERON:0006524;4.19e-11;3!UBERON:0008874;4.19e-11;3!UBERON:0002169;4.19e-11;3!UBERON:0004894;4.19e-11;3!UBERON:0003513;9.49e-11;7!UBERON:0009856;1.51e-08;4!UBERON:0000945;3.68e-07;5!UBERON:0010039;3.68e-07;5!UBERON:0002118;5.31e-07;5|ontology_enrichment_uberon_v019_2=UBERON:0002456,3.87e-17,2;UBERON:0003834,1.10e-14,5;UBERON:0001533,1.10e-14,5;UBERON:0007196,1.20e-12,15;UBERON:0001558,1.20e-12,15;UBERON:0004821,4.66e-11,3;UBERON:0003215,4.66e-11,3;UBERON:0010368,4.66e-11,3;UBERON:0009911,4.66e-11,3;UBERON:0002299,4.66e-11,3;UBERON:0006524,4.66e-11,3;UBERON:0008874,4.66e-11,3;UBERON:0002169,4.66e-11,3;UBERON:0004894,4.66e-11,3;UBERON:0003513,1.22e-10,7;UBERON:0000915,2.02e-08,52;UBERON:0002118,5.15e-07,5|phase1_expression=0,0.214100523890983,1.12763523276777,0,0.446961094427288,0,0,0,0.261185628199839,1.47440361900905,0,0,0,0.990130823680373,0.331397375727916,0,0,0,0,0,0,0,0,0,0,0,0,0,2.75354993794233,0,0,0,0,0,0,0,0,0,0.601633342410425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.419317291016752,0.44931452458598,0,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257207374262142,0,0,0,0,0,0,0,0,2.1100756394171,0.871533458600294,4.09889263846434,0,0,0,0,0,0,0,0,0.179060963239896,0,0,0.215627574859517,0,0,0,0,0,0,0,0,1.24324654030811,0.24538298343828,0,0.542530047399471,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0,0,0,0,0.248107807818777,0,0.841980283299221,1.02511319404561,0,0.321707842287215,1.48418066444991,0,0.177561725313127,0.246381468041427,0,0.697262270759755,0,0,0,0,0,0,0,0,0.784349769176855,0,0.316654886678627,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.096670718292122,0,0.460511024178389,0,0,0.145016693914229,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.71175595213568,0,0,0,0.274537029736055,0.353437207037059,0,0,0,0,2.19342140668156,4.22600587027022,0,0,0,1.10273068709225,0,0,1.15755106853338,1.9676842561399,0.202910376962704,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343505344755765,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,1.13654458722565,0,0,0,0,0,0,0,0,0.19924798825107,0.276283915531148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.326465616318295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150323419414493,1.14057010536972,0,0,0,0,0,0,0,0,0,0.17472666824203,0.171986032471617,0,0,0,0,0,0,0,0,0,0,0,0.213452994739353,0,0,1.14536596165916,0.514784993585894,0,0,0.235694034616795,0,0,0,2.60055530911367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0,0.511164065356265,2.15292973888239,0,0,0,0,0,0,0.213574825135389,0.157204305099666,0.414239055347196,0,0,0,0,0,0,0.612691153526923,0.327872630709804,0,0,0,0,0,0,0.248385611765534,0,0,1.66814029295813,0,0,0,0.144921028610825,0.597019211547496,0.934853239388898,0,0,0,0,0.228840068396924,0,0.932623203496683,0,0.159296767163702,0,0.310525913752519,0,0.53168342911599,0,1.35231848097497,0.380805212168795,1.22061219961398,0,1.39633724155235,0,0,0,0,0,0,0,0,0,0.226705925512272,0.231522474323834,0,0,0,0.438568099157414,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.690359926060101,0,0.225630985047772,0,0.781514011233092,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679697329768317,0,0,0,0,0,0,1.82631744101899,0.215927591218621,0.47775168788705,0,0,0.116241425368125,0,0,0,0,0,0,0.236664001461131,0.340853619036631,0,0,0,0,0.223710863595585,0,0,0,0,0,0,0,0,0.118920090777569,0,0,0,0.540219106755613,0,0,0,0,0,0,0,0.509781344063451,0,0,0,0,0,0,2.92134555298607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0.213233981900981,0,0,0,0,0,0,0,0,0,0.143444410785353,0,0,0,0,0,0,0,0,0,0.201273793591026,0|short_description=p8@HOXA5}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=3202 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5106 | |||
|TSSclassifier=S | |||
|UniProt=P20719,Q6FG31 | |||
|association_with_transcript=58bp_to_AB587591,BT009744,CR542256,CR542277,DQ890593,DQ893761_5end | |||
|coexpression_cluster_id=C1992 | |||
|description=CAGE_peak_8_at_HOXA5_5end | |||
|id=chr7:27183156..27183167,- | |||
|ontology_enrichment_celltype=CL:0002334!2.34e-09!12 | |||
|ontology_enrichment_celltype_v019=CL:0002593;3.85e-17;2!CL:0002600;3.48e-16;2!CL:0002595;7.74e-15;5!CL:0000322;4.19e-11;3!CL:0000094;2.87e-09;8!CL:0002581;5.97e-09;1!CL:0000081;7.27e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0002593,3.87e-17,2;CL:0002600,2.19e-16,2;CL:0002595,1.10e-14,5;CL:0000322,4.66e-11,3;CL:0000094,2.76e-09,8;CL:0002581,4.19e-09,1;CL:0000081,7.07e-07,11 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!7.41e-08!14 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0009569!3.30e-07!113 | |||
|ontology_enrichment_uberon_v019=UBERON:0002456;3.85e-17;2!UBERON:0003834;7.74e-15;5!UBERON:0001533;7.74e-15;5!UBERON:0007196;1.55e-12;15!UBERON:0001558;1.55e-12;15!UBERON:0004821;4.19e-11;3!UBERON:0007499;4.19e-11;3!UBERON:0003215;4.19e-11;3!UBERON:0010368;4.19e-11;3!UBERON:0009911;4.19e-11;3!UBERON:0002299;4.19e-11;3!UBERON:0006524;4.19e-11;3!UBERON:0008874;4.19e-11;3!UBERON:0002169;4.19e-11;3!UBERON:0004894;4.19e-11;3!UBERON:0003513;9.49e-11;7!UBERON:0009856;1.51e-08;4!UBERON:0000945;3.68e-07;5!UBERON:0010039;3.68e-07;5!UBERON:0002118;5.31e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002456,3.87e-17,2;UBERON:0003834,1.10e-14,5;UBERON:0001533,1.10e-14,5;UBERON:0007196,1.20e-12,15;UBERON:0001558,1.20e-12,15;UBERON:0004821,4.66e-11,3;UBERON:0003215,4.66e-11,3;UBERON:0010368,4.66e-11,3;UBERON:0009911,4.66e-11,3;UBERON:0002299,4.66e-11,3;UBERON:0006524,4.66e-11,3;UBERON:0008874,4.66e-11,3;UBERON:0002169,4.66e-11,3;UBERON:0004894,4.66e-11,3;UBERON:0003513,1.22e-10,7;UBERON:0000915,2.02e-08,52;UBERON:0002118,5.15e-07,5 | |||
|phase1_expression=0,0.214100523890983,1.12763523276777,0,0.446961094427288,0,0,0,0.261185628199839,1.47440361900905,0,0,0,0.990130823680373,0.331397375727916,0,0,0,0,0,0,0,0,0,0,0,0,0,2.75354993794233,0,0,0,0,0,0,0,0,0,0.601633342410425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.419317291016752,0.44931452458598,0,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257207374262142,0,0,0,0,0,0,0,0,2.1100756394171,0.871533458600294,4.09889263846434,0,0,0,0,0,0,0,0,0.179060963239896,0,0,0.215627574859517,0,0,0,0,0,0,0,0,1.24324654030811,0.24538298343828,0,0.542530047399471,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0,0,0,0,0.248107807818777,0,0.841980283299221,1.02511319404561,0,0.321707842287215,1.48418066444991,0,0.177561725313127,0.246381468041427,0,0.697262270759755,0,0,0,0,0,0,0,0,0.784349769176855,0,0.316654886678627,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.096670718292122,0,0.460511024178389,0,0,0.145016693914229,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.71175595213568,0,0,0,0.274537029736055,0.353437207037059,0,0,0,0,2.19342140668156,4.22600587027022,0,0,0,1.10273068709225,0,0,1.15755106853338,1.9676842561399,0.202910376962704,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343505344755765,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,1.13654458722565,0,0,0,0,0,0,0,0,0.19924798825107,0.276283915531148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.326465616318295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150323419414493,1.14057010536972,0,0,0,0,0,0,0,0,0,0.17472666824203,0.171986032471617,0,0,0,0,0,0,0,0,0,0,0,0.213452994739353,0,0,1.14536596165916,0.514784993585894,0,0,0.235694034616795,0,0,0,2.60055530911367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0,0.511164065356265,2.15292973888239,0,0,0,0,0,0,0.213574825135389,0.157204305099666,0.414239055347196,0,0,0,0,0,0,0.612691153526923,0.327872630709804,0,0,0,0,0,0,0.248385611765534,0,0,1.66814029295813,0,0,0,0.144921028610825,0.597019211547496,0.934853239388898,0,0,0,0,0.228840068396924,0,0.932623203496683,0,0.159296767163702,0,0.310525913752519,0,0.53168342911599,0,1.35231848097497,0.380805212168795,1.22061219961398,0,1.39633724155235,0,0,0,0,0,0,0,0,0,0.226705925512272,0.231522474323834,0,0,0,0.438568099157414,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.690359926060101,0,0.225630985047772,0,0.781514011233092,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679697329768317,0,0,0,0,0,0,1.82631744101899,0.215927591218621,0.47775168788705,0,0,0.116241425368125,0,0,0,0,0,0,0.236664001461131,0.340853619036631,0,0,0,0,0.223710863595585,0,0,0,0,0,0,0,0,0.118920090777569,0,0,0,0.540219106755613,0,0,0,0,0,0,0,0.509781344063451,0,0,0,0,0,0,2.92134555298607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0.213233981900981,0,0,0,0,0,0,0,0,0,0.143444410785353,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | |||
|short_description=p8@HOXA5 | |||
}} |
Revision as of 00:44, 14 September 2013
Short description: | p8@HOXA5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_8_at_HOXA5_5end |
Coexpression cluster: | C1992_Mesothelial_glioma_Smooth_Basophils_mesenchymal_Neutrophils_gastric |
Association with transcript: | 58bp_to_AB587591, BT009744, CR542256, CR542277, DQ890593, DQ893761_5end |
EntrezGene: | HOXA5 |
HGNC: | 5106 |
UniProt: | P20719Q6FG31 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the internal thoracic artery | 3.87e-17 | 2 |
smooth muscle cell of trachea | 2.19e-16 | 2 |
smooth muscle cell of the subclavian artery | 1.10e-14 | 5 |
pneumocyte | 4.66e-11 | 3 |
granulocyte | 2.76e-09 | 8 |
perirenal preadipocyte | 4.19e-09 | 1 |
blood cell | 7.07e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
internal thoracic artery | 3.87e-17 | 2 |
thoracic segment blood vessel | 1.10e-14 | 5 |
subclavian artery | 1.10e-14 | 5 |
tracheobronchial tree | 1.20e-12 | 15 |
lower respiratory tract | 1.20e-12 | 15 |
pulmonary alveolus epithelium | 4.66e-11 | 3 |
alveolus | 4.66e-11 | 3 |
pulmonary lobule | 4.66e-11 | 3 |
lobule | 4.66e-11 | 3 |
alveolus of lung | 4.66e-11 | 3 |
alveolar system | 4.66e-11 | 3 |
pulmonary acinus | 4.66e-11 | 3 |
alveolar sac | 4.66e-11 | 3 |
alveolar wall | 4.66e-11 | 3 |
trunk blood vessel | 1.22e-10 | 7 |
thoracic segment of trunk | 2.02e-08 | 52 |
right ovary | 5.15e-07 | 5 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.