FFCP PHASE1:Mm9::chr2:79095667..79095709,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=16401|HGNC=|MCL_coexpression_id=599|UniProt=Q792F9|association_with_transcript=10bp_to_ENSMUST00000099972_5end|description=CAGE_peak_2_at_Itga4_5end|id=chr2:79095667..79095709,+|ontology_enrichment_celltype=CL:0000988!1.74e-07!32;CL:0002032!1.74e-07!32;CL:0000037!1.74e-07!32;CL:0000566!1.74e-07!32;CL:0000837!1.74e-07!32|ontology_enrichment_celltype_v019_2=CL:0000988,1.60e-07,32;CL:0002032,1.60e-07,32;CL:0000037,1.60e-07,32;CL:0000837,1.60e-07,32|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!2.11e-10!48;UBERON:0002390!9.51e-10!45;UBERON:0003061!9.51e-10!45;UBERON:0002405!4.17e-09!70|ontology_enrichment_uberon_v019_2=UBERON:0002193,1.22e-10,48;UBERON:0002405,1.22e-10,48;UBERON:0002390,5.60e-10,45;UBERON:0003061,5.60e-10,45|phase1_expression=1.28119077683835,0,0,0,0,0,0.233612640595526,42.8689433826033,4.646027831005,2.80877431586392,1.36974374580404,0.717949430958028,35.0961496358972,29.0235736031071,72.9510378376301,79.5727800842016,81.8487397409932,41.4832747446083,43.053932152202,30.1316652776601,2.46625541438102,74.2696314982622,104.741115444713,6.55968933452967,6.65286915094793,0,0,0,0.760093677825496,2.26827116783938,0.443461021310609,12.7006134691926,11.6862309641068,0,0,0,0,17.5783284909501,27.346737058333,18.8468547830567,23.5292595212406,17.0761371239611,17.9638830621527,0.125896817975577,0.304130793658544,0.183546752161682,0,0.436050312760893,0.219686182734472,0,0,0,19.9661301208706,44.247090662692,52.0945388670819,2.82985379639542,2.0057340795713,2.57836046138721,0.606949382578793,0,1.90149421051854,0.338844532069132,0.889294796111139,4.49949858640699,6.92206453796882,7.104801149461,1.19840044207362,1.53687322128622,1.24427534770173,0.675029691658453,1.05162480675691,0.285650984403804,0.883474163806454,0.489963196859816,0.287536413054709,0,2.20231761998777,1.14918604276669,1.22885226604995,0.659431438650969,0.731901148819277,0,0.558365998002762,1.12552522006336,0.45839474333043,2.06240009831567,1.85083185038834,1.1183966749518,0.984440513331393,3.85414956544606,0.579728977403356,0.860423876981386,0,0,0,0,6.03911006566533,0,0,0,1.97180787687353,0,0,0,0,0,0,3.4255163915718,44.2783781036664,5.64080128446334,5.55153045651635,5.78484408793068,3.68984795609694,3.46662073271032,2.93971767839262,0.628332956648377,0.741584903203122,6.65157041831594,48.6535803572431,11.1619126463712,30.9178125844551,34.4261429726008,3.72783522436244,0.292780797011547,1.46612694769419,7.91916871146633,17.1335628043466,5.39912457894067,11.9446013448681,0.299581278809645,3.20250421973039,0.125654352112864,4.51943232499919,4.34716277461562,0.62336413367868,2.10913641988085,4.3790926455636,27.6183474754407,1.0108910337347,0.841767423545896,4.29397461776922,1.37941262660084,3.06105620669094,3.76762044589288,1.42876648217788,2.562274405697,2.24884138943349,2.32833033665114,2.58681591519411,5.10586416453112,4.92663147659057,6.1374805079721,7.50727572909114,5.57203466435466,4.93877127379064,3.78165106955137,7.72434506044558,11.3233079130475,12.5031939734061,7.66365358381357,10.3191466391682,2.88099298337624,2.60419209143731,1.96764231747404,1.54267112887378,1.62773761325285,0.804820204198858,0.700592054203017,1.31647879930784,1.47750717671186,1.21603214318784,1.16959989940266,2.41505126820156,1.8788898626452,4.6263788684108,1.54356918568927,3.30418782983798,2.3800550999719,5.11891801284562,6.0381534683714,4.25262622362908,2.21851877085677,1.55664630691409,2.28270751335071,2.84717436926707,2.79988223030818,4.77536896720512,2.58643413653496,3.8992817423824,3.59527763461689,5.18731319699266,1.39398891278057,1.89667900953082,5.59817711787671,5.63538678365402,2.8511185898344,2.13347735884388,2.10407459670956,4.36332106157375,1.47610147979602,2.04098346193787,0.616985819609003,1.1858105083486,50.3872219262604,60.5401704948665,66.109461041147,86.4184117115022,69.7001991684485,55.5084356883495,34.8112326315481,24.8066896965804,20.5921059891061,5.75072826109418,12.2806512730606,3.12037673114561,1.51547326768267,0.896987067609561,0.964887042726734,25.3111870528248,4.16881105895066,3.25929952884052,4.75286240170527,3.75504397261603,2.68010011906905,3.33261097240419,3.51240566144038,14.1871629695572,9.30151696524855,9.56728611944923,9.83179888294428,11.9152637487468,9.83613598354279,33.1740824666399,61.4613422715142,2.45882136509518,3.03530420935206,1.76605648986571,0.703270119553219,0,5.55436039849621,9.4652465824877,11.7131623288992,6.46270193198397,32.7387253194996,31.4146130456176,23.2122755246843,13.7635638569464,20.4579100537918,15.8115111178609,0.321321316421807,2.12910127812403,2.49291845134157,3.25773918707152,5.60898418106621,3.98235415019888,2.42780636154981,2.11626489875326,0.943025398779491,2.06711325016541,3.07435147943927,2.58428293168221,3.63533729477506,1.06949213515416,6.0046984007805,3.16255825724996,1.03135543248187,0,5.04171063287669,1.29358683782755,1.50035924522115,1.59606210278046,1.24858172321449,1.31639216481697,0.304464949114599,1.877373664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| ||
|EntrezGene=16401 | |||
|HGNC= | |||
|MCL_coexpression_id=599 | |||
|UniProt=Q792F9 | |||
|association_with_transcript=10bp_to_ENSMUST00000099972_5end | |||
|description=CAGE_peak_2_at_Itga4_5end | |||
|id=chr2:79095667..79095709,+ | |||
|ontology_enrichment_celltype=CL:0000988!1.74e-07!32;CL:0002032!1.74e-07!32;CL:0000037!1.74e-07!32;CL:0000566!1.74e-07!32;CL:0000837!1.74e-07!32 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,1.60e-07,32;CL:0002032,1.60e-07,32;CL:0000037,1.60e-07,32;CL:0000837,1.60e-07,32 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!2.11e-10!48;UBERON:0002390!9.51e-10!45;UBERON:0003061!9.51e-10!45;UBERON:0002405!4.17e-09!70 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,1.22e-10,48;UBERON:0002405,1.22e-10,48;UBERON:0002390,5.60e-10,45;UBERON:0003061,5.60e-10,45 | |||
|phase1_expression=1.28119077683835,0,0,0,0,0,0.233612640595526,42.8689433826033,4.646027831005,2.80877431586392,1.36974374580404,0.717949430958028,35.0961496358972,29.0235736031071,72.9510378376301,79.5727800842016,81.8487397409932,41.4832747446083,43.053932152202,30.1316652776601,2.46625541438102,74.2696314982622,104.741115444713,6.55968933452967,6.65286915094793,0,0,0,0.760093677825496,2.26827116783938,0.443461021310609,12.7006134691926,11.6862309641068,0,0,0,0,17.5783284909501,27.346737058333,18.8468547830567,23.5292595212406,17.0761371239611,17.9638830621527,0.125896817975577,0.304130793658544,0.183546752161682,0,0.436050312760893,0.219686182734472,0,0,0,19.9661301208706,44.247090662692,52.0945388670819,2.82985379639542,2.0057340795713,2.57836046138721,0.606949382578793,0,1.90149421051854,0.338844532069132,0.889294796111139,4.49949858640699,6.92206453796882,7.104801149461,1.19840044207362,1.53687322128622,1.24427534770173,0.675029691658453,1.05162480675691,0.285650984403804,0.883474163806454,0.489963196859816,0.287536413054709,0,2.20231761998777,1.14918604276669,1.22885226604995,0.659431438650969,0.731901148819277,0,0.558365998002762,1.12552522006336,0.45839474333043,2.06240009831567,1.85083185038834,1.1183966749518,0.984440513331393,3.85414956544606,0.579728977403356,0.860423876981386,0,0,0,0,6.03911006566533,0,0,0,1.97180787687353,0,0,0,0,0,0,3.4255163915718,44.2783781036664,5.64080128446334,5.55153045651635,5.78484408793068,3.68984795609694,3.46662073271032,2.93971767839262,0.628332956648377,0.741584903203122,6.65157041831594,48.6535803572431,11.1619126463712,30.9178125844551,34.4261429726008,3.72783522436244,0.292780797011547,1.46612694769419,7.91916871146633,17.1335628043466,5.39912457894067,11.9446013448681,0.299581278809645,3.20250421973039,0.125654352112864,4.51943232499919,4.34716277461562,0.62336413367868,2.10913641988085,4.3790926455636,27.6183474754407,1.0108910337347,0.841767423545896,4.29397461776922,1.37941262660084,3.06105620669094,3.76762044589288,1.42876648217788,2.562274405697,2.24884138943349,2.32833033665114,2.58681591519411,5.10586416453112,4.92663147659057,6.1374805079721,7.50727572909114,5.57203466435466,4.93877127379064,3.78165106955137,7.72434506044558,11.3233079130475,12.5031939734061,7.66365358381357,10.3191466391682,2.88099298337624,2.60419209143731,1.96764231747404,1.54267112887378,1.62773761325285,0.804820204198858,0.700592054203017,1.31647879930784,1.47750717671186,1.21603214318784,1.16959989940266,2.41505126820156,1.8788898626452,4.6263788684108,1.54356918568927,3.30418782983798,2.3800550999719,5.11891801284562,6.0381534683714,4.25262622362908,2.21851877085677,1.55664630691409,2.28270751335071,2.84717436926707,2.79988223030818,4.77536896720512,2.58643413653496,3.8992817423824,3.59527763461689,5.18731319699266,1.39398891278057,1.89667900953082,5.59817711787671,5.63538678365402,2.8511185898344,2.13347735884388,2.10407459670956,4.36332106157375,1.47610147979602,2.04098346193787,0.616985819609003,1.1858105083486,50.3872219262604,60.5401704948665,66.109461041147,86.4184117115022,69.7001991684485,55.5084356883495,34.8112326315481,24.8066896965804,20.5921059891061,5.75072826109418,12.2806512730606,3.12037673114561,1.51547326768267,0.896987067609561,0.964887042726734,25.3111870528248,4.16881105895066,3.25929952884052,4.75286240170527,3.75504397261603,2.68010011906905,3.33261097240419,3.51240566144038,14.1871629695572,9.30151696524855,9.56728611944923,9.83179888294428,11.9152637487468,9.83613598354279,33.1740824666399,61.4613422715142,2.45882136509518,3.03530420935206,1.76605648986571,0.703270119553219,0,5.55436039849621,9.4652465824877,11.7131623288992,6.46270193198397,32.7387253194996,31.4146130456176,23.2122755246843,13.7635638569464,20.4579100537918,15.8115111178609,0.321321316421807,2.12910127812403,2.49291845134157,3.25773918707152,5.60898418106621,3.98235415019888,2.42780636154981,2.11626489875326,0.943025398779491,2.06711325016541,3.07435147943927,2.58428293168221,3.63533729477506,1.06949213515416,6.0046984007805,3.16255825724996,1.03135543248187,0,5.04171063287669,1.29358683782755,1.50035924522115,1.59606210278046,1.24858172321449,1.31639216481697,0.304464949114599,1.87737366450968,0.847328283455281,1.32317038832977,2.14352128823924,5.48979050766079,3.79971427047382,2.02932984805332,2.1338316966858,3.49777003955821,2.59595422814714,74.4997040278638,14.2406938894624,44.6318810961005,91.9238070182892,103.067447701653,84.4191459132068,15.298058699447,14.8348539463077,16.0311969613132,0.954670618015114,3.00519193902079,3.45643094115643,2.70013352054503,4.18176592028937,3.27543845619266,3.50647300600534,4.05001933054146,2.09404753587224,3.11075935900303,3.72803587852155,0,7.027277664067,6.28742263736971,7.38914515707381,7.74958940866387,8.95467465101124,6.92407708009948,4.6873578543822,0.943734099831398,0.483168241652012,1.15212002503146,16.7485893932934,22.0970484666279,33.278350121404,24.4251147198255,19.5139098277555,14.3050575442511,14.7840402909562,16.0981584620289,12.0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| |||
|short_description=p2@Itga4 | |||
}} | |||
Revision as of 00:42, 14 September 2013
| Short description: | p2@Itga4 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_2_at_Itga4_5end |
| Coexpression cluster: | MCL_coexpression_mm9:599 |
| Association with transcript: | 10bp_to_ENSMUST00000099972_5end |
| EntrezGene: | Itga4 |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| hematopoietic cell | 1.60e-07 | 32 |
| hematopoietic oligopotent progenitor cell | 1.60e-07 | 32 |
| hematopoietic stem cell | 1.60e-07 | 32 |
| hematopoietic multipotent progenitor cell | 1.60e-07 | 32 |
| Ontology term | p-value | n |
|---|---|---|
| hemolymphoid system | 1.22e-10 | 48 |
| immune system | 1.22e-10 | 48 |
| hematopoietic system | 5.60e-10 | 45 |
| blood island | 5.60e-10 | 45 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
