FFCP PHASE1:Mm9::chr2:71368815..71368836,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=13390|HGNC=|MCL_coexpression_id=184|UniProt=G3UZ42|association_with_transcript=0bp_to_ENSMUST00000172629_5end|description=CAGE_peak_4_at_Dlx1_5end|id=chr2:71368815..71368836,+|ontology_enrichment_celltype=CL:0002609!5.74e-07!6|ontology_enrichment_celltype_v019_2=CL:0002608,2.25e-19,3;CL:0002609,1.21e-16,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002780!8.51e-09!39;UBERON:0001890!8.51e-09!39;UBERON:0006240!8.51e-09!39;UBERON:0002791!1.34e-08!29;UBERON:0003528!1.34e-08!29;UBERON:0001893!1.34e-08!29;UBERON:0003080!1.92e-08!40;UBERON:0000955!2.00e-08!50;UBERON:0006238!2.00e-08!50;UBERON:0003056!1.18e-07!49;UBERON:0002616!1.28e-07!49;UBERON:0000033!1.32e-07!63;UBERON:0000014!4.46e-07!5;UBERON:0001003!4.46e-07!5;UBERON:0002097!4.46e-07!5;UBERON:0002199!4.46e-07!5;UBERON:0007029!4.46e-07!5;UBERON:0007376!4.46e-07!5;UBERON:0002416!4.46e-07!5;UBERON:0007383!4.46e-07!5;UBERON:0004121!5.54e-07!102;UBERON:0000924!5.54e-07!102;UBERON:0006601!5.54e-07!102;UBERON:0000956!7.70e-07!21;UBERON:0001869!7.70e-07!21;UBERON:0000203!7.70e-07!21|ontology_enrichment_uberon_v019_2=UBERON:0001954,2.26e-14,7;UBERON:0003022,2.26e-14,7;UBERON:0002421,2.26e-14,7;UBERON:0000349,2.26e-14,7;UBERON:0002600,2.26e-14,7;UBERON:0000956,2.23e-13,21;UBERON:0001869,2.23e-13,21;UBERON:0000203,2.23e-13,21;UBERON:0003528,2.00e-12,29;UBERON:0002791,2.00e-12,29;UBERON:0001893,2.00e-12,29;UBERON:0002619,2.11e-12,17;UBERON:0000955,1.52e-11,47;UBERON:0006238,1.52e-11,47;UBERON:0002020,1.78e-10,34;UBERON:0010371,3.00e-10,73;UBERON:0002616,1.79e-09,46;UBERON:0004121,4.89e-09,95;UBERON:0000924,4.89e-09,95;UBERON:0006601,4.89e-09,95;UBERON:0002780,5.04e-09,39;UBERON:0001890,5.04e-09,39;UBERON:0006240,5.04e-09,39;UBERON:0003056,8.09e-09,49;UBERON:0003080,8.90e-09,40;UBERON:0001049,2.94e-08,52;UBERON:0005068,2.94e-08,52;UBERON:0006241,2.94e-08,52;UBERON:0007135,2.94e-08,52;UBERON:0002346,4.75e-08,64;UBERON:0003075,4.75e-08,64;UBERON:0007284,4.75e-08,64;UBERON:0000073,6.53e-08,54;UBERON:0001017,5.54e-07,73;UBERON:0001016,9.22e-07,75|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0,0,1.09012578190223,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.725827286159344,1.21505344498522,0,0,0,10.9016811301309,14.5685115947719,11.9498442259303,0,0,0.153606533256243,0.791317726381163,0.640413505216868,0.52091337055676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0,0,0,0.304465478312141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.39790232395025,0,0.767146371990992,0.20778804455956,0.162241263067758,0,0,0,0,0,0.229902104433473,1.0803727788321,0,0,0,0,0,0,0,0,0,0.278047249225598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.16099685996497,0,0,0,0.464473343720877,0.128867461322093,0.201683524623343,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.390438744296638,0.215423397732799,0,0,0,0,0,0.790575555893047,10.9249247583414,0,0,0,0,0,0,0,0.188605079755898,0,0,0,0,0,0,0,0,0,0.18006109403131,0.517434735131018,0,0,0,0,0,0,0,0,0.32977250588296,0.484393280087717,0.241251699712623,2.38744688006273,2.79039529566604,0,0,0,0,0,0,0,0,0,0,0,0,0.316335993581135,0.813277868507395,0.432021363287205,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.564751842617067,0,0.572895513439397,0.515559547031063,0,0,0,1.80128481289688,0,1.03552062350364,0.31136204275253,1.19707462020309,0.512200817262403,0,0.628839487883947,0,0.44449345560323,0.206035057238894,0,0.252697211763798,0.50695859978048,0.565879024158229,0.0936415074698824,0.320125762024346,0.287177344778066,0,0.115884325944855,0.578727661391115,0,0.147198920134397,0.342869252385415,0.354951612318675,0.238436189947321,0.290692833264657,0.470546902076653,0.169229215783353,1.09756783723664,0.526139422875686,0,0,0.118635018124174,0.394017929502254,0,0,0,0.749431733813838,0.233931608445408,0,0,0,0|short_description=p4@Dlx1}} | ||
|EntrezGene=13390 | |||
|HGNC= | |||
|MCL_coexpression_id=184 | |||
|UniProt=G3UZ42 | |||
|association_with_transcript=0bp_to_ENSMUST00000172629_5end | |||
|description=CAGE_peak_4_at_Dlx1_5end | |||
|id=chr2:71368815..71368836,+ | |||
|ontology_enrichment_celltype=CL:0002609!5.74e-07!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002608,2.25e-19,3;CL:0002609,1.21e-16,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002780!8.51e-09!39;UBERON:0001890!8.51e-09!39;UBERON:0006240!8.51e-09!39;UBERON:0002791!1.34e-08!29;UBERON:0003528!1.34e-08!29;UBERON:0001893!1.34e-08!29;UBERON:0003080!1.92e-08!40;UBERON:0000955!2.00e-08!50;UBERON:0006238!2.00e-08!50;UBERON:0003056!1.18e-07!49;UBERON:0002616!1.28e-07!49;UBERON:0000033!1.32e-07!63;UBERON:0000014!4.46e-07!5;UBERON:0001003!4.46e-07!5;UBERON:0002097!4.46e-07!5;UBERON:0002199!4.46e-07!5;UBERON:0007029!4.46e-07!5;UBERON:0007376!4.46e-07!5;UBERON:0002416!4.46e-07!5;UBERON:0007383!4.46e-07!5;UBERON:0004121!5.54e-07!102;UBERON:0000924!5.54e-07!102;UBERON:0006601!5.54e-07!102;UBERON:0000956!7.70e-07!21;UBERON:0001869!7.70e-07!21;UBERON:0000203!7.70e-07!21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001954,2.26e-14,7;UBERON:0003022,2.26e-14,7;UBERON:0002421,2.26e-14,7;UBERON:0000349,2.26e-14,7;UBERON:0002600,2.26e-14,7;UBERON:0000956,2.23e-13,21;UBERON:0001869,2.23e-13,21;UBERON:0000203,2.23e-13,21;UBERON:0003528,2.00e-12,29;UBERON:0002791,2.00e-12,29;UBERON:0001893,2.00e-12,29;UBERON:0002619,2.11e-12,17;UBERON:0000955,1.52e-11,47;UBERON:0006238,1.52e-11,47;UBERON:0002020,1.78e-10,34;UBERON:0010371,3.00e-10,73;UBERON:0002616,1.79e-09,46;UBERON:0004121,4.89e-09,95;UBERON:0000924,4.89e-09,95;UBERON:0006601,4.89e-09,95;UBERON:0002780,5.04e-09,39;UBERON:0001890,5.04e-09,39;UBERON:0006240,5.04e-09,39;UBERON:0003056,8.09e-09,49;UBERON:0003080,8.90e-09,40;UBERON:0001049,2.94e-08,52;UBERON:0005068,2.94e-08,52;UBERON:0006241,2.94e-08,52;UBERON:0007135,2.94e-08,52;UBERON:0002346,4.75e-08,64;UBERON:0003075,4.75e-08,64;UBERON:0007284,4.75e-08,64;UBERON:0000073,6.53e-08,54;UBERON:0001017,5.54e-07,73;UBERON:0001016,9.22e-07,75 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0,0,1.09012578190223,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.725827286159344,1.21505344498522,0,0,0,10.9016811301309,14.5685115947719,11.9498442259303,0,0,0.153606533256243,0.791317726381163,0.640413505216868,0.52091337055676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0,0,0,0.304465478312141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.39790232395025,0,0.767146371990992,0.20778804455956,0.162241263067758,0,0,0,0,0,0.229902104433473,1.0803727788321,0,0,0,0,0,0,0,0,0,0.278047249225598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.16099685996497,0,0,0,0.464473343720877,0.128867461322093,0.201683524623343,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.390438744296638,0.215423397732799,0,0,0,0,0,0.790575555893047,10.9249247583414,0,0,0,0,0,0,0,0.188605079755898,0,0,0,0,0,0,0,0,0,0.18006109403131,0.517434735131018,0,0,0,0,0,0,0,0,0.32977250588296,0.484393280087717,0.241251699712623,2.38744688006273,2.79039529566604,0,0,0,0,0,0,0,0,0,0,0,0,0.316335993581135,0.813277868507395,0.432021363287205,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.564751842617067,0,0.572895513439397,0.515559547031063,0,0,0,1.80128481289688,0,1.03552062350364,0.31136204275253,1.19707462020309,0.512200817262403,0,0.628839487883947,0,0.44449345560323,0.206035057238894,0,0.252697211763798,0.50695859978048,0.565879024158229,0.0936415074698824,0.320125762024346,0.287177344778066,0,0.115884325944855,0.578727661391115,0,0.147198920134397,0.342869252385415,0.354951612318675,0.238436189947321,0.290692833264657,0.470546902076653,0.169229215783353,1.09756783723664,0.526139422875686,0,0,0.118635018124174,0.394017929502254,0,0,0,0.749431733813838,0.233931608445408,0,0,0,0 | |||
|short_description=p4@Dlx1 | |||
}} |
Revision as of 00:26, 14 September 2013
Short description: | p4@Dlx1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Dlx1_5end |
Coexpression cluster: | MCL_coexpression_mm9:184 |
Association with transcript: | 0bp_to_ENSMUST00000172629_5end |
EntrezGene: | Dlx1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hippocampal neuron | 2.25e-19 | 3 |
neuron of cerebral cortex | 1.21e-16 | 6 |
Ontology term | p-value | n |
---|---|---|
Ammon's horn | 2.26e-14 | 7 |
lobe parts of cerebral cortex | 2.26e-14 | 7 |
hippocampal formation | 2.26e-14 | 7 |
limbic system | 2.26e-14 | 7 |
limbic lobe | 2.26e-14 | 7 |
cerebral cortex | 2.23e-13 | 21 |
cerebral hemisphere | 2.23e-13 | 21 |
pallium | 2.23e-13 | 21 |
brain grey matter | 2.00e-12 | 29 |
regional part of telencephalon | 2.00e-12 | 29 |
telencephalon | 2.00e-12 | 29 |
regional part of cerebral cortex | 2.11e-12 | 17 |
brain | 1.52e-11 | 47 |
future brain | 1.52e-11 | 47 |
gray matter | 1.78e-10 | 34 |
ecto-epithelium | 3.00e-10 | 73 |
regional part of brain | 1.79e-09 | 46 |
ectoderm-derived structure | 4.89e-09 | 95 |
ectoderm | 4.89e-09 | 95 |
presumptive ectoderm | 4.89e-09 | 95 |
regional part of forebrain | 5.04e-09 | 39 |
forebrain | 5.04e-09 | 39 |
future forebrain | 5.04e-09 | 39 |
pre-chordal neural plate | 8.09e-09 | 49 |
anterior neural tube | 8.90e-09 | 40 |
neural tube | 2.94e-08 | 52 |
neural rod | 2.94e-08 | 52 |
future spinal cord | 2.94e-08 | 52 |
neural keel | 2.94e-08 | 52 |
neurectoderm | 4.75e-08 | 64 |
neural plate | 4.75e-08 | 64 |
presumptive neural plate | 4.75e-08 | 64 |
regional part of nervous system | 6.53e-08 | 54 |
central nervous system | 5.54e-07 | 73 |
nervous system | 9.22e-07 | 75 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.