FFCP PHASE1:Mm9::chr2:38563878..38563923,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=3351|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr2:38563878..38563923,-|id=chr2:38563878..38563923,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000991!1.60e-26!18;UBERON:0005564!1.60e-26!18;UBERON:0004176!2.23e-24!17;UBERON:0009196!2.23e-24!17;UBERON:0009117!2.23e-24!17;UBERON:0003133!6.30e-22!24;UBERON:0000473!1.51e-21!14;UBERON:0002369!5.47e-20!7;UBERON:0006858!5.47e-20!7;UBERON:0005156!5.63e-20!26;UBERON:0000990!5.63e-20!26;UBERON:0003135!5.90e-20!15;UBERON:0002323!2.88e-19!37;UBERON:0004458!2.88e-19!37;UBERON:0003886!1.19e-18!38;UBERON:0003101!1.46e-18!16;UBERON:0000079!1.46e-18!16;UBERON:0002553!4.56e-18!39;UBERON:0002342!1.20e-13!10;UBERON:0005062!1.20e-13!10;UBERON:0003064!6.78e-12!14;UBERON:0000464!4.54e-11!57;UBERON:0000466!6.89e-07!79;UBERON:0002106!8.11e-07!6;UBERON:0004457!8.11e-07!6;UBERON:0000042!8.11e-07!6;UBERON:0004854!8.11e-07!6;UBERON:0009034!8.11e-07!6;UBERON:0002095!8.11e-07!6;UBERON:0004782!8.11e-07!6;UBERON:0003281!8.11e-07!6;UBERON:0009664!8.11e-07!6;UBERON:0002296!8.11e-07!6;UBERON:0005602!8.11e-07!6;UBERON:0001179!8.11e-07!6;UBERON:0006293!8.11e-07!6|ontology_enrichment_uberon_v019_2=UBERON:0002369,1.70e-39,7;UBERON:0006858,1.70e-39,7;UBERON:0004176,1.03e-24,17;UBERON:0009196,1.03e-24,17;UBERON:0009117,1.03e-24,17;UBERON:0000473,5.25e-24,14;UBERON:0000991,2.74e-23,18;UBERON:0005564,2.74e-23,18;UBERON:0003135,2.34e-22,15;UBERON:0003101,6.50e-21,16;UBERON:0000079,6.50e-21,16;UBERON:0003064,1.73e-19,14;UBERON:0003133,3.18e-17,24;UBERON:0005156,8.03e-16,26;UBERON:0000990,8.03e-16,26;UBERON:0002323,8.28e-11,37;UBERON:0004458,8.28e-11,37;UBERON:0003886,1.70e-10,38;UBERON:0002553,3.37e-10,39;UBERON:0000926,5.14e-10,120;UBERON:0004120,5.14e-10,120;UBERON:0006603,5.14e-10,120|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0914876436024097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,4.60170631100957,3.12273588179045,6.69824052286711,4.84292544237723,4.37095657602605,5.64425794251383,2.89033160058254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398068533636986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189667900953082,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.41298144854057,0,0.488660878060728,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0,0,0,0,0,0,0,0,0,0,0,0.161464426695906,0,0,0,0,0,0.170870880797853,0.412773735926445,0.555583582109135,0.188368457004691,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.78452947340732,2.48187735685646,3.30567020184881,2.58319646955462,2.87225413334323,3.16864544343536,0.781226309063701,2.51662426621706,0.724752362478018,1.15212002503146,0,0,0,0,0,0,0,0,0.100966449948148,0,0,0,0,0,0,0,0,0,0,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.399024873401031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135804113845862,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr2:38563878..38563923,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=3351 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr2:38563878..38563923,- | |||
|id=chr2:38563878..38563923,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000991!1.60e-26!18;UBERON:0005564!1.60e-26!18;UBERON:0004176!2.23e-24!17;UBERON:0009196!2.23e-24!17;UBERON:0009117!2.23e-24!17;UBERON:0003133!6.30e-22!24;UBERON:0000473!1.51e-21!14;UBERON:0002369!5.47e-20!7;UBERON:0006858!5.47e-20!7;UBERON:0005156!5.63e-20!26;UBERON:0000990!5.63e-20!26;UBERON:0003135!5.90e-20!15;UBERON:0002323!2.88e-19!37;UBERON:0004458!2.88e-19!37;UBERON:0003886!1.19e-18!38;UBERON:0003101!1.46e-18!16;UBERON:0000079!1.46e-18!16;UBERON:0002553!4.56e-18!39;UBERON:0002342!1.20e-13!10;UBERON:0005062!1.20e-13!10;UBERON:0003064!6.78e-12!14;UBERON:0000464!4.54e-11!57;UBERON:0000466!6.89e-07!79;UBERON:0002106!8.11e-07!6;UBERON:0004457!8.11e-07!6;UBERON:0000042!8.11e-07!6;UBERON:0004854!8.11e-07!6;UBERON:0009034!8.11e-07!6;UBERON:0002095!8.11e-07!6;UBERON:0004782!8.11e-07!6;UBERON:0003281!8.11e-07!6;UBERON:0009664!8.11e-07!6;UBERON:0002296!8.11e-07!6;UBERON:0005602!8.11e-07!6;UBERON:0001179!8.11e-07!6;UBERON:0006293!8.11e-07!6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002369,1.70e-39,7;UBERON:0006858,1.70e-39,7;UBERON:0004176,1.03e-24,17;UBERON:0009196,1.03e-24,17;UBERON:0009117,1.03e-24,17;UBERON:0000473,5.25e-24,14;UBERON:0000991,2.74e-23,18;UBERON:0005564,2.74e-23,18;UBERON:0003135,2.34e-22,15;UBERON:0003101,6.50e-21,16;UBERON:0000079,6.50e-21,16;UBERON:0003064,1.73e-19,14;UBERON:0003133,3.18e-17,24;UBERON:0005156,8.03e-16,26;UBERON:0000990,8.03e-16,26;UBERON:0002323,8.28e-11,37;UBERON:0004458,8.28e-11,37;UBERON:0003886,1.70e-10,38;UBERON:0002553,3.37e-10,39;UBERON:0000926,5.14e-10,120;UBERON:0004120,5.14e-10,120;UBERON:0006603,5.14e-10,120 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0914876436024097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,4.60170631100957,3.12273588179045,6.69824052286711,4.84292544237723,4.37095657602605,5.64425794251383,2.89033160058254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398068533636986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189667900953082,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.41298144854057,0,0.488660878060728,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0,0,0,0,0,0,0,0,0,0,0,0.161464426695906,0,0,0,0,0,0.170870880797853,0.412773735926445,0.555583582109135,0.188368457004691,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.78452947340732,2.48187735685646,3.30567020184881,2.58319646955462,2.87225413334323,3.16864544343536,0.781226309063701,2.51662426621706,0.724752362478018,1.15212002503146,0,0,0,0,0,0,0,0,0.100966449948148,0,0,0,0,0,0,0,0,0,0,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.399024873401031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135804113845862,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr2:38563878..38563923,- | |||
}} |
Revision as of 23:59, 13 September 2013
Short description: | p@chr2:38563878..38563923, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr2:38563878..38563923, - |
Coexpression cluster: | MCL_coexpression_mm9:3351 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adrenal gland | 1.70e-39 | 7 |
adrenal/interrenal gland | 1.70e-39 | 7 |
external genitalia | 1.03e-24 | 17 |
indifferent external genitalia | 1.03e-24 | 17 |
indifferent gonad | 1.03e-24 | 17 |
testis | 5.25e-24 | 14 |
gonad | 2.74e-23 | 18 |
gonad primordium | 2.74e-23 | 18 |
male reproductive organ | 2.34e-22 | 15 |
male organism | 6.50e-21 | 16 |
male reproductive system | 6.50e-21 | 16 |
intermediate mesoderm | 1.73e-19 | 14 |
reproductive organ | 3.18e-17 | 24 |
reproductive structure | 8.03e-16 | 26 |
reproductive system | 8.03e-16 | 26 |
body cavity | 8.28e-11 | 37 |
body cavity or lining | 8.28e-11 | 37 |
body cavity precursor | 1.70e-10 | 38 |
anatomical cavity | 3.37e-10 | 39 |
mesoderm | 5.14e-10 | 120 |
mesoderm-derived structure | 5.14e-10 | 120 |
presumptive mesoderm | 5.14e-10 | 120 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.