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FFCP PHASE1:Mm9::chr2:30271523..30271565,-: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=12908|HGNC=|MCL_coexpression_id=0|UniProt=P47934|association_with_transcript=-190bp_to_ENSMUST00000028207_5end|description=CAGE_peak_6_at_Crat_5end|id=chr2:30271523..30271565,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000956!5.04e-10!21;UBERON:0001869!5.04e-10!21;UBERON:0000203!5.04e-10!21;UBERON:0002791!2.91e-09!29;UBERON:0003528!2.91e-09!29;UBERON:0001893!2.91e-09!29;UBERON:0000955!4.20e-09!50;UBERON:0006238!4.20e-09!50;UBERON:0001049!7.43e-09!52;UBERON:0005068!7.43e-09!52;UBERON:0006241!7.43e-09!52;UBERON:0007135!7.43e-09!52;UBERON:0002020!1.03e-08!34;UBERON:0002616!1.25e-08!49;UBERON:0003080!3.23e-08!40;UBERON:0002780!6.99e-08!39;UBERON:0001890!6.99e-08!39;UBERON:0006240!6.99e-08!39;UBERON:0002619!8.23e-08!17;UBERON:0002021!1.14e-07!10;UBERON:0000411!1.14e-07!10;UBERON:0001950!1.14e-07!10;UBERON:0003056!7.00e-07!49;UBERON:0000033!8.57e-07!63;UBERON:0000153!9.11e-07!94|ontology_enrichment_uberon_v019_2=UBERON:0000956,2.28e-13,21;UBERON:0001869,2.28e-13,21;UBERON:0000203,2.28e-13,21;UBERON:0002021,7.03e-12,10;UBERON:0000411,7.03e-12,10;UBERON:0001950,7.03e-12,10;UBERON:0000955,1.16e-11,47;UBERON:0006238,1.16e-11,47;UBERON:0002616,6.43e-11,46;UBERON:0003528,1.51e-10,29;UBERON:0002791,1.51e-10,29;UBERON:0001893,1.51e-10,29;UBERON:0002619,8.67e-10,17;UBERON:0000073,1.28e-09,54;UBERON:0003080,1.69e-09,40;UBERON:0001049,2.06e-09,52;UBERON:0005068,2.06e-09,52;UBERON:0006241,2.06e-09,52;UBERON:0007135,2.06e-09,52;UBERON:0002780,5.46e-09,39;UBERON:0001890,5.46e-09,39;UBERON:0006240,5.46e-09,39;UBERON:0002020,6.25e-09,34;UBERON:0001017,4.18e-08,73;UBERON:0001016,1.25e-07,75|phase1_expression=0.160148847104794,1.74487703819681,1.36499771816861,1.51232105653415,1.00179145989269,0,0.467225281191051,0.129123323441576,0,0.234064526321993,0,0.239316476986009,0.171200729931206,0.0874204024189974,1.66554880907831,1.21485160433896,0.699561878128147,0.315462165358238,0.137114433605739,0,49.8353680285269,0.198581902401771,0.261199789138935,0.639969691173627,0.22940928106717,0.57423196411502,0.430761996159075,0.430942465371778,0.380046838912748,0,0.221730510655305,0,1.23012957516914,0,0.288851619751275,0,0,0.837063261473815,0.7813353445238,0,0.588231488031014,0.683045484958446,0,0.125896817975577,0,0.183546752161682,0,0.436050312760893,0.439372365468944,0.194429899074283,0.279972843250725,1.43752564364972,0,0,0,0,0,0,1.82084814773638,0.528990979272033,1.26766280701236,0.338844532069132,0.889294796111139,0,0,0.7104801149461,0,0,2.48855069540346,1.89008313664367,2.52389953621658,0.571301968807607,0.662605622854841,1.95985278743926,0.862609239164127,0.919218786610021,0,0.638436690425939,1.53606533256243,0.659431438650969,0.823388792421687,0.52091337055676,0,0.56276261003168,0.45839474333043,0.294628585473668,1.13897344639282,0.372798891650601,0.151452386666368,0.0755715601067855,0,0,0,0.539703191637817,0,0.448026887097336,5.75822122540183,0,0.519572009205738,0,0.14084341977668,0,0,0,0,0.253359865475099,0,5.82337786567206,0.258937883647172,0.148442139064825,0.173485326766136,0.608930956624282,0.461230994512117,0.753613202763113,0.352766121407114,0,0.247194967734374,1.01219549843938,1.76922110389975,0.485300549842228,0,0,3.72783522436244,1.75668478206928,2.09446706813455,0,0,0,0,1.3481157546434,4.57500602818627,1.38219787324151,3.12883776346098,3.58001640262463,2.0778804455956,2.27137768294861,0,1.11966273549084,1.0108910337347,0.420883711772948,0,0.689706313300419,0.720248519221397,0.90422890701429,0.136072998302656,0.640568601424249,0.843315521037559,0,0.431135985865684,0.945530400839096,0.879755620819744,0.657587197282725,0.278047249225598,1.0447564995665,1.02891068203972,0.398068533636986,0,0.257347907114715,0,1.24275463521301,0.938104239924385,0.900310307305074,0.473489471170421,0.787056926989615,0.771335564436891,0.465067889500816,1.07309360559848,0.583826711835847,0,0.656669856316381,0.324275238183423,0.584799949701329,0.658650345873152,0.402619256281115,2.94405927989778,1.23485534855141,0.330418782983798,0.528901133327089,0.213288250535234,0,0.644337306610467,0.201683524623343,0.22237804384487,0.570676878337677,0,0.823494773620054,0.502670417600539,0,0.19496408711912,0.898819408654221,0.432276099749388,0.796565093017469,0.758671603812327,0.342745537829186,0,0.610953983535943,0.193952487167626,0.280543279561274,0.948548056863859,0.147610147979602,0.941992367048249,0.370191491765402,0,0.500535317148282,0.786235980452812,1.12431056192427,1.62288097110802,0.72353147925725,1.01850340712568,0.863088412352432,0.486405680325106,0.274561413188081,1.43768206527355,0.372140947668503,0,0,0.179397413521912,0,0,0,0,0.339490171550376,0,0.167506257441816,0,0.390267295715598,0,0,0.637819074629948,0,0.518054945597687,0,0,0,0,0.275936746304732,1.12385412991454,1.28932855251423,0.163934945376675,1.76729649043061,0.315508219416257,0,0,0,1.33679204449436,0,0,0.292255857911312,0,2.57057053137446,0.283880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|EntrezGene=12908
|HGNC=
|MCL_coexpression_id=0
|UniProt=P47934
|association_with_transcript=-190bp_to_ENSMUST00000028207_5end
|description=CAGE_peak_6_at_Crat_5end
|id=chr2:30271523..30271565,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000956!5.04e-10!21;UBERON:0001869!5.04e-10!21;UBERON:0000203!5.04e-10!21;UBERON:0002791!2.91e-09!29;UBERON:0003528!2.91e-09!29;UBERON:0001893!2.91e-09!29;UBERON:0000955!4.20e-09!50;UBERON:0006238!4.20e-09!50;UBERON:0001049!7.43e-09!52;UBERON:0005068!7.43e-09!52;UBERON:0006241!7.43e-09!52;UBERON:0007135!7.43e-09!52;UBERON:0002020!1.03e-08!34;UBERON:0002616!1.25e-08!49;UBERON:0003080!3.23e-08!40;UBERON:0002780!6.99e-08!39;UBERON:0001890!6.99e-08!39;UBERON:0006240!6.99e-08!39;UBERON:0002619!8.23e-08!17;UBERON:0002021!1.14e-07!10;UBERON:0000411!1.14e-07!10;UBERON:0001950!1.14e-07!10;UBERON:0003056!7.00e-07!49;UBERON:0000033!8.57e-07!63;UBERON:0000153!9.11e-07!94
|ontology_enrichment_uberon_v019_2=UBERON:0000956,2.28e-13,21;UBERON:0001869,2.28e-13,21;UBERON:0000203,2.28e-13,21;UBERON:0002021,7.03e-12,10;UBERON:0000411,7.03e-12,10;UBERON:0001950,7.03e-12,10;UBERON:0000955,1.16e-11,47;UBERON:0006238,1.16e-11,47;UBERON:0002616,6.43e-11,46;UBERON:0003528,1.51e-10,29;UBERON:0002791,1.51e-10,29;UBERON:0001893,1.51e-10,29;UBERON:0002619,8.67e-10,17;UBERON:0000073,1.28e-09,54;UBERON:0003080,1.69e-09,40;UBERON:0001049,2.06e-09,52;UBERON:0005068,2.06e-09,52;UBERON:0006241,2.06e-09,52;UBERON:0007135,2.06e-09,52;UBERON:0002780,5.46e-09,39;UBERON:0001890,5.46e-09,39;UBERON:0006240,5.46e-09,39;UBERON:0002020,6.25e-09,34;UBERON:0001017,4.18e-08,73;UBERON:0001016,1.25e-07,75
|phase1_expression=0.160148847104794,1.74487703819681,1.36499771816861,1.51232105653415,1.00179145989269,0,0.467225281191051,0.129123323441576,0,0.234064526321993,0,0.239316476986009,0.171200729931206,0.0874204024189974,1.66554880907831,1.21485160433896,0.699561878128147,0.315462165358238,0.137114433605739,0,49.8353680285269,0.198581902401771,0.261199789138935,0.639969691173627,0.22940928106717,0.57423196411502,0.430761996159075,0.430942465371778,0.380046838912748,0,0.221730510655305,0,1.23012957516914,0,0.288851619751275,0,0,0.837063261473815,0.7813353445238,0,0.588231488031014,0.683045484958446,0,0.125896817975577,0,0.183546752161682,0,0.436050312760893,0.439372365468944,0.194429899074283,0.279972843250725,1.43752564364972,0,0,0,0,0,0,1.82084814773638,0.528990979272033,1.26766280701236,0.338844532069132,0.889294796111139,0,0,0.7104801149461,0,0,2.48855069540346,1.89008313664367,2.52389953621658,0.571301968807607,0.662605622854841,1.95985278743926,0.862609239164127,0.919218786610021,0,0.638436690425939,1.53606533256243,0.659431438650969,0.823388792421687,0.52091337055676,0,0.56276261003168,0.45839474333043,0.294628585473668,1.13897344639282,0.372798891650601,0.151452386666368,0.0755715601067855,0,0,0,0.539703191637817,0,0.448026887097336,5.75822122540183,0,0.519572009205738,0,0.14084341977668,0,0,0,0,0.253359865475099,0,5.82337786567206,0.258937883647172,0.148442139064825,0.173485326766136,0.608930956624282,0.461230994512117,0.753613202763113,0.352766121407114,0,0.247194967734374,1.01219549843938,1.76922110389975,0.485300549842228,0,0,3.72783522436244,1.75668478206928,2.09446706813455,0,0,0,0,1.3481157546434,4.57500602818627,1.38219787324151,3.12883776346098,3.58001640262463,2.0778804455956,2.27137768294861,0,1.11966273549084,1.0108910337347,0.420883711772948,0,0.689706313300419,0.720248519221397,0.90422890701429,0.136072998302656,0.640568601424249,0.843315521037559,0,0.431135985865684,0.945530400839096,0.879755620819744,0.657587197282725,0.278047249225598,1.0447564995665,1.02891068203972,0.398068533636986,0,0.257347907114715,0,1.24275463521301,0.938104239924385,0.900310307305074,0.473489471170421,0.787056926989615,0.771335564436891,0.465067889500816,1.07309360559848,0.583826711835847,0,0.656669856316381,0.324275238183423,0.584799949701329,0.658650345873152,0.402619256281115,2.94405927989778,1.23485534855141,0.330418782983798,0.528901133327089,0.213288250535234,0,0.644337306610467,0.201683524623343,0.22237804384487,0.570676878337677,0,0.823494773620054,0.502670417600539,0,0.19496408711912,0.898819408654221,0.432276099749388,0.796565093017469,0.758671603812327,0.342745537829186,0,0.610953983535943,0.193952487167626,0.280543279561274,0.948548056863859,0.147610147979602,0.941992367048249,0.370191491765402,0,0.500535317148282,0.786235980452812,1.12431056192427,1.62288097110802,0.72353147925725,1.01850340712568,0.863088412352432,0.486405680325106,0.274561413188081,1.43768206527355,0.372140947668503,0,0,0.179397413521912,0,0,0,0,0.339490171550376,0,0.167506257441816,0,0.390267295715598,0,0,0.637819074629948,0,0.518054945597687,0,0,0,0,0.275936746304732,1.12385412991454,1.28932855251423,0.163934945376675,1.76729649043061,0.315508219416257,0,0,0,1.33679204449436,0,0,0.292255857911312,0,2.57057053137446,0.283880170416537,1.95872164033981,0.325773918707152,0.329940245945071,0,0.728341908464944,0,0.377210159511796,0.295301892880773,0,0,0.363533729477506,0.712994756769443,0.316036757935816,1.05418608574999,0,0,0.36012218806262,0.388076051348264,0.428674070063185,1.06404140185364,0.356737635204141,0.658196082408484,0,0.704015124191131,0.63549621259146,0.220528398054962,0.65954501176592,0.322928853391811,0.301564624640779,0.477489376012546,0.492422699235184,0,0.927126510052548,1.19609616558497,1.03193433981611,0.740778109478847,1.88368457004691,1.36694227721025,2.51655990527175,0,0.279902904647316,0,0,0.632671987162271,0,0,0,0.87345025498471,0,0.165306911450672,0.523511883968059,0,0,310.594809214989,0.598066184175915,0.165458490457098,1.36115831840833,1.6790777052105,0.675824501963113,0.938857909166032,1.43224823328345,2.83120229949419,126.348495192001,152.367873310411,1.58005560314089,0.405450430580328,0.513554785824136,1.03936658382236,1.9692936523423,1.98681354781265,0.841368146639782,1.47689527174577,1.00966449948148,0.457240839929999,0.705783295957884,1.46186821109629,0.962118416403295,1.40252282617883,0.680191150845634,0.221985953374065,0.897138566094757,0,0.19318959403219,0.187682475451182,0.915758121336325,0.214368379079066,0,2.82375921308533,3.22227665555024,5.72895513439397,2.92150409984269,2.74033007908257,3.7769694869485,2.02506750069542,4.05289082901798,5.89085131679466,5.1776031175182,0.31136204275253,1.59609949360412,0.512200817262403,0.243106717068294,0,0.367687016900028,1.11123363900808,0.412070114477788,0.320919209591815,1.26348605881899,1.2673964994512,0.943131706930381,1.03005658216871,0.448176066834085,0.804096565378586,1.42888107384922,0.927074607558844,0,0,1.17759136107518,1.71434626192708,0.35495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|short_description=p6@Crat
}}

Revision as of 23:41, 13 September 2013

Short description:p6@Crat
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_6_at_Crat_5end
Coexpression cluster:MCL_coexpression_mm9:0
Association with transcript: -190bp_to_ENSMUST00000028207_5end
EntrezGene:Crat
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p6@Crat

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.16
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I51.74
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I61.36
CD326+ enterocyte, pool1.CNhs13542.11848-124I31.51
CD326+ enterocyte, pool2.CNhs13197.11849-124I41.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.47
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.13
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.23
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.24
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.17
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.09
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A11.67
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A31.21
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.70
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.32
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.14
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A349.84
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.20
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.26
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.64
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.23
GP2+ M cell, pool1.CNhs13228.11845-124H90.57
GP2+ M cell, pool2.CNhs13231.11846-124I10.43
GP2+ M cell, pool3.CNhs13240.11847-124I20.43
Ileum epithelium, pool1.CNhs13199.10252-104B90.38
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G61.23
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.29
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.84
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.78
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.59
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.68
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.13
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.18
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.44
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.44
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.28
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C31.82
Mouse Granule cells, donor2.CNhs12357.11731-123E30.53
Mouse Granule cells, donor3.CNhs12108.11636-122C71.27
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.71
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D52.49
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.89
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D92.52
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.66
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.96
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.86
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.64
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D71.54
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.66
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.82
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.52
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.56
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.46
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.29
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.14
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.37
Mouse Schwann, donor1.CNhs12507.11728-123D90.15
Mouse Schwann, donor2.CNhs12573.11746-123F90.08
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.54
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.45
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A75.76
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.52
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.14
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.25
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B65.82
accessory axillary lymph node, adult.CNhs10475.1063-29H90.26
adrenal gland, adult.CNhs10508.49-24D70.15
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.61
adrenal gland, embryo E17.CNhs11043.1263-45I10.46
adrenal gland, embryo E18.CNhs11026.1262-18F50.75
adrenal gland, neonate N00.CNhs11191.1311-23C10.35
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.25
aorta, adult.CNhs10498.46-23H11.01
bone (os femoris), adult.CNhs10483.56-12G21.77
bone (os femoris), neonate N02.CNhs11227.1985-43F50.49
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H43.73
cerebellum, adult.CNhs10494.15-8B21.76
cerebellum, neonate N30.CNhs11135.1395-42I22.09
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A41.35
corpus striatum, adult.CNhs10487.19-21D84.58
corpus striatum, neonate N00.CNhs11226.630-43F11.38
cortex, adult.CNhs10473.12-14D53.13
cortex, neonate N30.CNhs11107.1392-42F23.58
diencephalon, adult.CNhs10482.20-12F22.08
diencephalon, neonate N30.CNhs11201.1388-42B22.27
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.12
epididymis, adult.CNhs10490.58-23B21.01
eyeball, adult.CNhs10484.31-12G40.42
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.69
eyeball, embryo E15.CNhs10593.426-16C90.72
eyeball, embryo E17.CNhs11023.1261-18D40.90
eyeball, neonate N00.CNhs11207.633-15C60.14
eyeball, neonate N01.CNhs11140.1532-43E70.64
eyeball, neonate N02.CNhs11205.1551-44G80.84
eyeball, neonate N16.CNhs11188.777-19A20.00
forelimb, embryo E11.CNhs10596.335-25E20.43
forelimb, embryo E12.CNhs10600.359-14H20.95
forelimb, embryo E13.CNhs10589.384-1E20.88
forelimb, embryo E14.CNhs10577.413-26A80.66
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C41.04
forelimb, embryo E18.CNhs11008.1520-43B51.03
gonad, embryo E13.CNhs11044.1564-45I60.40
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.26
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E91.24
heart, embryo E12.CNhs11015.353-12F50.94
heart, embryo E13.CNhs11013.376-3I90.90
heart, embryo E14.CNhs10597.403-26D40.47
heart, embryo E15.CNhs11017.431-16C80.79
heart, embryo E16.CNhs11021.457-17C60.77
heart, embryo E17.CNhs11025.479-18E50.47
heart, embryo E18.CNhs11030.1283-20G31.07
heart, neonate N00.CNhs11213.639-21E30.58
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.66
heart, neonate N16.CNhs11209.782-15G10.32
heart, neonate N20.CNhs11127.821-26I60.58
heart, neonate N25.CNhs11196.1351-25D30.66
heart, neonate N30.CNhs11202.1390-42D20.40
hippocampus, adult.CNhs10478.13-16E82.94
hippocampus, neonate N00.CNhs11228.627-43G11.23
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A30.53
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.64
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.57
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.82
intestine, neonate N06.CNhs11102.688-20B80.50
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E30.43
intestine, neonate N30.CNhs11131.1384-42G10.80
kidney, embryo E14.CNhs10606.411-4I90.76
kidney, embryo E15.CNhs10997.434-16F80.34
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.61
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.28
kidney, neonate N10.CNhs11206.758-6D50.95
kidney, neonate N20.CNhs11113.832-19I10.15
kidney, neonate N25.CNhs11122.1353-25F30.94
kidney, neonate N30.CNhs11203.1385-42H10.37
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.50
liver, embryo E13.CNhs10524.378-3H60.79
liver, embryo E14.CNhs10594.409-16E11.12
liver, embryo E15.CNhs10520.433-16D71.62
liver, embryo E16.CNhs10523.462-17F50.72
liver, embryo E17.CNhs10510.481-18A31.02
liver, embryo E18.CNhs10579.499-43G40.86
liver, neonate N00.CNhs11117.641-24F40.49
liver, neonate N03.CNhs11123.1345-25G20.27
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.18
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.34
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.39
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.64
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.52
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C21.12
medulla oblongata, neonate N30.CNhs11200.1396-42A31.29
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.16
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C21.77
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D81.34
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I92.57
ovary, adult.CNhs10507.91-2I70.28
ovary, embryo E18.CNhs11040.505-44H71.96
ovary, neonate N00.CNhs11217.1299-22I40.33
oviduct, adult pregnant day01.CNhs10500.988-6G60.33
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.73
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.38
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.71
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.36
pituitary gland, embryo E13.CNhs11009.370-44C70.39
pituitary gland, embryo E14.CNhs11037.398-44A50.43
pituitary gland, embryo E15.CNhs10592.427-16B91.06
pituitary gland, embryo E16.CNhs11036.449-43F60.36
pituitary gland, embryo E17.CNhs11039.1265-44F50.66
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.70
placenta, adult pregnant day17.CNhs10464.577-18G30.64
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C30.66
skin, neonate N00.CNhs11124.650-25G40.32
skin, neonate N03.CNhs11215.662-22H30.30
skin, neonate N06.CNhs11097.693-20I50.48
skin, neonate N10.CNhs11108.762-6C40.49
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C90.93
spleen, adult.CNhs10465.25-2G21.20
spleen, embryo E16.CNhs11035.461-43C11.03
spleen, embryo E18.CNhs11011.1271-21F20.74
spleen, neonate N10.CNhs11116.752-24D11.88
spleen, neonate N20.CNhs11112.824-19H11.37
spleen, neonate N25.CNhs11099.1354-25G32.52
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.28
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.63
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.00
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.87
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.17
stomach, neonate N25.CNhs11104.1355-25E40.52
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G5310.59
testis, embryo E13.CNhs11031.389-23F50.60
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G51.36
testis, embryo E17.CNhs11029.486-18I51.68
testis, embryo E18.CNhs11027.503-18G50.68
testis, neonate N00.CNhs11189.1300-22B70.94
testis, neonate N07.CNhs11222.726-26I41.43
testis, neonate N10.CNhs11204.763-44D92.83
testis, neonate N20.CNhs11110.839-18H3126.35
testis, neonate N30.CNhs11130.1391-42E2152.37
thymus, adult.CNhs10471.38-12B51.58
thymus, embryo E14.CNhs11041.402-44I40.41
thymus, embryo E15.CNhs11005.430-45I20.51
thymus, embryo E16.CNhs11002.456-26C51.04
thymus, embryo E17.CNhs10581.478-18C11.97
thymus, embryo E18.CNhs10595.1273-19G41.99
thymus, neonate N02.CNhs11181.1541-43F80.84
thymus, neonate N03.CNhs11137.2104-43C71.48
thymus, neonate N06.CNhs11197.681-26C41.01
thymus, neonate N07.CNhs11211.713-19D30.46
thymus, neonate N10.CNhs11194.748-24E40.71
thymus, neonate N20.CNhs11186.820-7A21.46
thymus, neonate N25.CNhs11125.1362-25G70.96
thymus, neonate N30.CNhs11132.1393-42G21.40
tongue, adult.CNhs10499.32-1B40.68
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.90
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F50.19
uterus, adult.CNhs10509.92-27E50.92
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A12.82
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A23.22
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A35.73
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D72.92
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A42.74
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A53.78
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A62.03
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A74.05
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A85.89
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A95.18
whole body, embryo E11.CNhs11014.324-5I80.31
whole body, embryo E12.CNhs10587.857-27C91.60
whole body, embryo E13.CNhs10512.372-23H20.51
whole body, embryo E14.5.CNhs10578.420-27D20.24
whole body, embryo E14.CNhs10519.395-14B10.00
whole body, embryo E16.CNhs10514.453-14F20.37
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.11
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.26
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.27
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.94
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.45
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.80
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.93
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.18
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.71
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.45
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.22
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.91
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.79
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.22
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.71
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.23
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.62
whole body, embryo E17.5.CNhs10513.490-9F90.00
whole body, embryo E17.CNhs10517.475-3I51.50
whole body, embryo E18.CNhs10516.493-3B31.17
whole body, neonate N00.CNhs10525.657-19C20.86
whole body, neonate N01.CNhs10576.659-23C60.38
whole body, neonate N06.CNhs10515.692-21D10.66
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
cerebral cortex2.28e-1321
cerebral hemisphere2.28e-1321
pallium2.28e-1321
occipital lobe7.03e-1210
visual cortex7.03e-1210
neocortex7.03e-1210
brain1.16e-1147
future brain1.16e-1147
regional part of brain6.43e-1146
brain grey matter1.51e-1029
regional part of telencephalon1.51e-1029
telencephalon1.51e-1029
regional part of cerebral cortex8.67e-1017
regional part of nervous system1.28e-0954
anterior neural tube1.69e-0940
neural tube2.06e-0952
neural rod2.06e-0952
future spinal cord2.06e-0952
neural keel2.06e-0952
regional part of forebrain5.46e-0939
forebrain5.46e-0939
future forebrain5.46e-0939
gray matter6.25e-0934
central nervous system4.18e-0873
nervous system1.25e-0775







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

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