FFCP PHASE1:Mm9::chr2:26883436..26883515,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=227659|HGNC=|MCL_coexpression_id=1074|UniProt=A2AR27|association_with_transcript=0bp_to_ENSMUST00000129835,ENSMUST00000145742,ENSMUST00000153388_5end|description=CAGE_peak_1_at_Slc2a6_5end|id=chr2:26883436..26883515,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000723,2.77e-07,91;CL:0000048,2.77e-07,91;CL:0000034,4.19e-07,97|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!1.17e-14!75;UBERON:0001016!1.17e-14!75;UBERON:0001017!2.36e-14!73;UBERON:0005743!2.36e-14!73;UBERON:0001049!1.10e-11!52;UBERON:0005068!1.10e-11!52;UBERON:0006241!1.10e-11!52;UBERON:0007135!1.10e-11!52;UBERON:0000955!6.77e-11!50;UBERON:0006238!6.77e-11!50;UBERON:0002616!1.46e-10!49;UBERON:0002020!1.76e-10!34;UBERON:0002791!1.54e-08!29;UBERON:0003528!1.54e-08!29;UBERON:0001893!1.54e-08!29;UBERON:0002346!6.35e-08!71;UBERON:0003075!6.35e-08!71;UBERON:0007284!6.35e-08!71;UBERON:0003080!7.41e-08!40;UBERON:0004121!8.31e-08!102;UBERON:0000924!8.31e-08!102;UBERON:0006601!8.31e-08!102;UBERON:0000033!1.67e-07!63;UBERON:0002780!1.76e-07!39;UBERON:0001890!1.76e-07!39;UBERON:0006240!1.76e-07!39;UBERON:0002371!5.50e-07!16;UBERON:0002204!6.76e-07!32|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.10e-14,75;UBERON:0001017,2.27e-14,73;UBERON:0000073,1.95e-12,54;UBERON:0001049,1.38e-11,52;UBERON:0005068,1.38e-11,52;UBERON:0006241,1.38e-11,52;UBERON:0007135,1.38e-11,52;UBERON:0002020,7.99e-11,34;UBERON:0000955,1.46e-09,47;UBERON:0006238,1.46e-09,47;UBERON:0002616,3.14e-09,46;UBERON:0002346,3.66e-09,64;UBERON:0003075,3.66e-09,64;UBERON:0007284,3.66e-09,64;UBERON:0003528,8.28e-09,29;UBERON:0002791,8.28e-09,29;UBERON:0001893,8.28e-09,29;UBERON:0004121,1.19e-08,95;UBERON:0000924,1.19e-08,95;UBERON:0006601,1.19e-08,95;UBERON:0003080,1.15e-07,40;UBERON:0002780,2.77e-07,39;UBERON:0001890,2.77e-07,39;UBERON:0006240,2.77e-07,39;UBERON:0002371,3.39e-07,16;UBERON:0002204,9.21e-07,32|phase1_expression=0.80074423552397,199.613933169715,206.569654682849,0,0.500895729946347,86.1220664907995,124.515537437415,1.29123323441576,0.281577444303333,0.468129052643987,0.34243593645101,0.398860794976682,0,0.174840804837995,5.99597571268193,6.68168382386426,1.39912375625629,16.4040325986284,17.9619908023518,15.7024171165271,7.99406927420056,21.645427361793,19.5899841854202,129.913847308246,181.692150605199,233.138177430698,215.811760075696,305.969150413962,0.380046838912748,1.00812051903972,225.27819882579,3.17515336729816,3.07532393792285,0,0.288851619751275,0,0.204169356262369,92.4954903928566,51.5681327385708,49.211231933537,279.998188302763,214.476282276952,112.638401903228,4.78407908307194,6.38674666682942,1.65192076945513,2.34717403304412,1.74420125104357,1.97717564461025,1.55543919259427,4.61955191363696,0,31.7109125449122,1.45072428402269,1.34437519656986,1.80081605225163,4.58453503902011,1.54701627683233,6.47412674750713,10.0508286061686,2.53532561402472,10.8430250262122,16.0073063300005,36.4459385498967,35.5991890524111,44.7602472416043,14.9800055259202,14.9845139075406,2.69592992002042,2.8351247049655,2.3135745748652,26.2798905651499,31.1424642741775,2.44981598429908,2.1086003624012,5.51531271966013,38.540558349786,19.9192247412893,22.1193407888991,7.25374582516066,7.41049913179518,6.25096044668112,29.5933978941464,20.8222165711722,22.6141406709679,23.2756582524197,23.2065839702538,14.911955666024,2.95332153999418,4.98772296704784,0.579728977403356,1.72084775396277,0,0,0,0,4.21333260395256,0.681721290312231,0.259786004602869,2.12003744706204,1.69012103732017,0,0,0,0,0,0.505524445014783,1.59857431606684,18.3845897389492,2.22663208597237,0.867426633830679,1.21786191324856,0.691846491768175,1.3565037649736,0.940709657085638,0.753999547978053,0.247194967734374,2.4581890676385,18.5768215909474,1.13236794963186,4.41683036920787,4.363877278217,7.45567044872489,42.1604347696628,45.4499353785197,2.81002760729451,53.4375455296404,30.5950392806638,43.203877204842,25.7639899776295,15.5550204958333,5.40313714085317,33.7219181173016,39.6358958862012,22.4411088124325,24.1739481970959,0.407357455401265,5.72272064806428,1.26361379216837,0.631325567659422,0.650602214813519,0.919608417733892,0.540186389416048,1.05493372485001,1.02054748726992,2.0498195245576,1.87403449119458,7.50239775143145,1.07783996466421,0.756424320671277,0.351902248327898,0.43839146485515,0.834141747676794,0.696504333044333,0.823128545631774,0.199034266818493,42.1327912387941,24.1907032687832,36.0887644232403,0,0.703578179943289,0,0,0,0,0.232533944750408,0.268273401399619,0.233530684734339,0.329119699826961,0.32833492815819,0.243206428637567,0.584799949701329,2.41505126820156,0.671032093801859,33.4361018216962,6.79170441703277,11.2342386214491,0.793351699990633,0.639864751605702,0.696710015581316,0.77320476793256,1.61346819698674,0.22237804384487,1.14135375667535,0,0.658795818896044,1.00534083520108,1.39269530428806,0.974820435595601,2.69645822596266,1.29682829924817,1.7922714592893,0.569003702859245,0.22849702521945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| ||
|EntrezGene=227659 | |||
|HGNC= | |||
|MCL_coexpression_id=1074 | |||
|UniProt=A2AR27 | |||
|association_with_transcript=0bp_to_ENSMUST00000129835,ENSMUST00000145742,ENSMUST00000153388_5end | |||
|description=CAGE_peak_1_at_Slc2a6_5end | |||
|id=chr2:26883436..26883515,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000723,2.77e-07,91;CL:0000048,2.77e-07,91;CL:0000034,4.19e-07,97 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.17e-14!75;UBERON:0001016!1.17e-14!75;UBERON:0001017!2.36e-14!73;UBERON:0005743!2.36e-14!73;UBERON:0001049!1.10e-11!52;UBERON:0005068!1.10e-11!52;UBERON:0006241!1.10e-11!52;UBERON:0007135!1.10e-11!52;UBERON:0000955!6.77e-11!50;UBERON:0006238!6.77e-11!50;UBERON:0002616!1.46e-10!49;UBERON:0002020!1.76e-10!34;UBERON:0002791!1.54e-08!29;UBERON:0003528!1.54e-08!29;UBERON:0001893!1.54e-08!29;UBERON:0002346!6.35e-08!71;UBERON:0003075!6.35e-08!71;UBERON:0007284!6.35e-08!71;UBERON:0003080!7.41e-08!40;UBERON:0004121!8.31e-08!102;UBERON:0000924!8.31e-08!102;UBERON:0006601!8.31e-08!102;UBERON:0000033!1.67e-07!63;UBERON:0002780!1.76e-07!39;UBERON:0001890!1.76e-07!39;UBERON:0006240!1.76e-07!39;UBERON:0002371!5.50e-07!16;UBERON:0002204!6.76e-07!32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.10e-14,75;UBERON:0001017,2.27e-14,73;UBERON:0000073,1.95e-12,54;UBERON:0001049,1.38e-11,52;UBERON:0005068,1.38e-11,52;UBERON:0006241,1.38e-11,52;UBERON:0007135,1.38e-11,52;UBERON:0002020,7.99e-11,34;UBERON:0000955,1.46e-09,47;UBERON:0006238,1.46e-09,47;UBERON:0002616,3.14e-09,46;UBERON:0002346,3.66e-09,64;UBERON:0003075,3.66e-09,64;UBERON:0007284,3.66e-09,64;UBERON:0003528,8.28e-09,29;UBERON:0002791,8.28e-09,29;UBERON:0001893,8.28e-09,29;UBERON:0004121,1.19e-08,95;UBERON:0000924,1.19e-08,95;UBERON:0006601,1.19e-08,95;UBERON:0003080,1.15e-07,40;UBERON:0002780,2.77e-07,39;UBERON:0001890,2.77e-07,39;UBERON:0006240,2.77e-07,39;UBERON:0002371,3.39e-07,16;UBERON:0002204,9.21e-07,32 | |||
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| |||
|short_description=p1@Slc2a6 | |||
}} |
Revision as of 23:33, 13 September 2013
Short description: | p1@Slc2a6 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Slc2a6_5end |
Coexpression cluster: | MCL_coexpression_mm9:1074 |
Association with transcript: | 0bp_to_ENSMUST00000129835, ENSMUST00000145742, ENSMUST00000153388_5end |
EntrezGene: | Slc2a6 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
somatic stem cell | 2.77e-07 | 91 |
multi fate stem cell | 2.77e-07 | 91 |
stem cell | 4.19e-07 | 97 |
Ontology term | p-value | n |
---|---|---|
nervous system | 1.10e-14 | 75 |
central nervous system | 2.27e-14 | 73 |
regional part of nervous system | 1.95e-12 | 54 |
neural tube | 1.38e-11 | 52 |
neural rod | 1.38e-11 | 52 |
future spinal cord | 1.38e-11 | 52 |
neural keel | 1.38e-11 | 52 |
gray matter | 7.99e-11 | 34 |
brain | 1.46e-09 | 47 |
future brain | 1.46e-09 | 47 |
regional part of brain | 3.14e-09 | 46 |
neurectoderm | 3.66e-09 | 64 |
neural plate | 3.66e-09 | 64 |
presumptive neural plate | 3.66e-09 | 64 |
brain grey matter | 8.28e-09 | 29 |
regional part of telencephalon | 8.28e-09 | 29 |
telencephalon | 8.28e-09 | 29 |
ectoderm-derived structure | 1.19e-08 | 95 |
ectoderm | 1.19e-08 | 95 |
presumptive ectoderm | 1.19e-08 | 95 |
anterior neural tube | 1.15e-07 | 40 |
regional part of forebrain | 2.77e-07 | 39 |
forebrain | 2.77e-07 | 39 |
future forebrain | 2.77e-07 | 39 |
bone marrow | 3.39e-07 | 16 |
musculoskeletal system | 9.21e-07 | 32 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.